Vlad Mihai Sima

ORCID

Publication Activity (10 Years)

Years Active: 2007-2018
Publications (10 Years): 11

Top Venues

Delft University of Technology, Netherlands (PHD)

Education History

Delft University of Technology, Netherlands

PHD

Publications

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths. Comput. Biol. Chem. 75 (2018)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM. BIBE (2018)
Ernst Houtgast, Vlad Mihai Sima, Zaid Al-Ars
High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL. BIBE (2017)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing. ARCS (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM. SIGARCH Comput. Archit. News 44 (4) (2016)
Razvan Nane, Vlad Mihai Sima, Christian Pilato, Jongsok Choi, Blair Fort, Andrew Canis, Yu Ting Chen, Hsuan Hsiao, Stephen Dean Brown, Fabrizio Ferrandi, Jason Helge Anderson, Koen Bertels
A Survey and Evaluation of FPGA High-Level Synthesis Tools. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 35 (10) (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars
Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms. ReConFig (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars
Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms. FCCM (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm. SAMOS (2015)
Shanshan Ren, Vlad Mihai Sima, Zaid Al-Ars
FPGA acceleration of the pair-HMMs forward algorithm for DNA sequence analysis. BIBM (2015)
Nauman Ahmed, Vlad Mihai Sima, Ernst Houtgast, Koen Bertels, Zaid Al-Ars
Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm. ICCAD (2015)
Mark de Jong, Vlad Mihai Sima, Koen Bertels, David Thomas
FPGA-accelerated Monte-Carlo integration using stratified sampling and Brownian bridges. FPT (2014)
Razvan Nane, Vlad Mihai Sima, Cuong Pham-Quoc, Fernando M. Gonçalves, Koen Bertels
High-Level Synthesis in the Delft Workbench Hardware/Software Co-design Tool-Chain. EUC (2014)
Giovanni Mariani, Gianluca Palermo, Roel Meeuws, Vlad Mihai Sima, Cristina Silvano, Koen Bertels
DRuiD: Designing reconfigurable architectures with decision-making support. ASP-DAC (2014)
Giovanni Mariani, Vlad Mihai Sima, Gianluca Palermo, Vittorio Zaccaria, Giacomo Marchiori, Cristina Silvano, Koen Bertels
Run-time optimization of a dynamically reconfigurable embedded system through performance prediction. FPL (2013)
Roel Meeuws, Sayyed Arash Ostadzadeh, Carlo Galuzzi, Vlad Mihai Sima, Razvan Nane, Koen Bertels
Quipu: A Statistical Model for Predicting Hardware Resources. ACM Trans. Reconfigurable Technol. Syst. 6 (1) (2013)
Razvan Nane, Vlad Mihai Sima, Bryan Olivier, Roel Meeuws, Yana Yankova, Koen Bertels
DWARV 2.0: A CoSy-based C-to-VHDL hardware compiler. FPL (2012)
Razvan Nane, Vlad Mihai Sima, Koen Bertels
Area constraint propagation in high level synthesis. FPT (2012)
Giovanni Mariani, Vlad Mihai Sima, Gianluca Palermo, Vittorio Zaccaria, Cristina Silvano, Koen Bertels
Using multi-objective design space exploration to enable run-time resource management for reconfigurable architectures. DATE (2012)
Razvan Nane, Vlad Mihai Sima, Koen Bertels
A lightweight speculative and predicative scheme for hardware execution. ReConFig (2012)
Razvan Nane, Sven van Haastregt, Todor P. Stefanov, Bart Kienhuis, Vlad Mihai Sima, Koen Bertels
IP-XACT extensions for Reconfigurable Computing. ASAP (2011)
Koen Bertels, Vlad Mihai Sima, Yana Yankova, Georgi Kuzmanov, Wayne Luk, José Gabriel F. Coutinho, Fabrizio Ferrandi, Christian Pilato, Marco Lattuada, Donatella Sciuto, Andrea Michelotti
HArtes: Hardware-Software Codesign for Heterogeneous Multicore Platforms. IEEE Micro 30 (5) (2010)
Vlad Mihai Sima, Koen Bertels
Runtime decision of hardware or software execution on a heterogeneous reconfigurable platform. IPDPS (2009)
Vlad Mihai Sima, Koen Bertels
Runtime Memory Allocation in a Heterogeneous Reconfigurable Platform. ReConFig (2009)
Mojtaba Sabeghi, Vlad Mihai Sima, Koen Bertels
Compiler assisted runtime task scheduling on a reconfigurable computer. FPL (2009)
Vlad Mihai Sima, Elena Moscu Panainte, Koen Bertels
Resource allocation algorithm and OpenMP extensions for parallel execution on a heterogeneous reconfigurable platform. FPL (2008)
Koen Bertels, Georgi Kuzmanov, Elena Moscu Panainte, Georgi Gaydadjiev, Yana Yankova, Vlad Mihai Sima, Kamana Sigdel, Roel Meeuws, Stamatis Vassiliadis
HARTES Toolchain Early Evaluation: Profiling, Compilation and HDL Generation. FPL (2007)

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Publication Activity (10 Years)

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Vlad Mihai Sima