Ernst Joachim Houtgast

Publication Activity (10 Years)

Years Active: 2015-2018
Publications (10 Years): 7

Top Topics

Computing Platform

Implementation Issues

Top Venues

Delft University of Technology, Netherlands (PHD)

Education History

Delft University of Technology, Netherlands

PHD

Publications

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths. Comput. Biol. Chem. 75 (2018)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM. BIBE (2018)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing. ARCS (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM. SIGARCH Comput. Archit. News 44 (4) (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars
Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms. ReConFig (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars
Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms. FCCM (2016)
Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars
An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm. SAMOS (2015)