Tomoya Mori

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 14

Top Topics

Simulation Model

Embedded Devices

Data Assimilation

Top Venues

J. Comput. Biol.

BMC Syst. Biol.

Publications

Lixuan Mu, Jiangning Song, Tatsuya Akutsu, Tomoya Mori
DiCleave: a deep learning model for predicting human Dicer cleavage sites. BMC Bioinform. 25 (1) (2024)
Tomoya Mori, Toshiro Takase, Kuan-Chun Lan, Junko Yamane, Cantas Alev, Azuma Kimura, Kenji Osafune, Jun K. Yamashita, Tatsuya Akutsu, Hiroaki Kitano, Wataru Fujibuchi
eSPRESSO: topological clustering of single-cell transcriptomics data to reveal informative genes for spatio-temporal architectures of cells. BMC Bioinform. 24 (1) (2023)
Ulrike Münzner, Tomoya Mori, Marcus Krantz, Edda Klipp, Tatsuya Akutsu
Identification of periodic attractors in Boolean networks using a priori information. PLoS Comput. Biol. 18 (1) (2022)
Tatsuya Akutsu, Tomoya Mori, Naotoshi Nakamura, Satoshi Kozawa, Yuhei Ueno, Thomas N. Sato
On the Complexity of Tree Edit Distance with Variables. ISAAC (2022)
Tatsuya Akutsu, Tomoya Mori, Naotoshi Nakamura, Satoshi Kozawa, Yuhei Ueno, Thomas N. Sato
Tree Edit Distance with Variables. Measuring the Similarity between Mathematical Formulas. CoRR (2021)
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
mROS: A Lightweight Runtime Environment of ROS 1 nodes for Embedded Devices. J. Inf. Process. 28 (2020)
Feiqi Wang, Tatsuya Akutsu, Tomoya Mori
Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit Distance. J. Comput. Biol. 27 (9) (2020)
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
mROS: A Lightweight Runtime Environment for Robot Software Components onto Embedded Devices. HEART (2019)
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
Design concept of a lightweight runtime environment for robot software components onto embedded devices: work-in-progress. EMSOFT (2018)
Yuki Kato, Tomoya Mori, Kengo Sato, Shingo Maegawa, Hiroshi Hosokawa, Tatsuya Akutsu
An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data. Bioinform. 33 (2) (2017)
Tomoya Mori, Yoichi Utsunomiya, Xuejun Tian, Takashi Okuda
Queueing theoretic approach to job assignment strategy considering various inter-arrival of job in fog computing. APNOMS (2017)
Xiaoqing Cheng, Tomoya Mori, Yushan Qiu, Wai-Ki Ching, Tatsuya Akutsu
Exact Identification of the Structure of a Probabilistic Boolean Network from Samples. IEEE ACM Trans. Comput. Biol. Bioinform. 13 (6) (2016)
Tomoya Mori, Atsuhiro Takasu, Jesper Jansson, Jaewook Hwang, Takeyuki Tamura, Tatsuya Akutsu
Similar subtree search using extended tree inclusion. ICDE (2016)
Takanori Hasegawa, Atsushi Niida, Tomoya Mori, Teppei Shimamura, Rui Yamaguchi, Satoru Miyano, Tatsuya Akutsu, Seiya Imoto
A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models. Comput. Stat. Data Anal. 94 (2016)
Takanori Hasegawa, Tomoya Mori, Rui Yamaguchi, Teppei Shimamura, Satoru Miyano, Seiya Imoto, Tatsuya Akutsu
Genomic data assimilation using a higher moment filtering technique for restoration of gene regulatory networks. BMC Syst. Biol. 9 (2015)
Tomoya Mori, Max Flöttmann, Marcus Krantz, Tatsuya Akutsu, Edda Klipp
Stochastic simulation of Boolean rxncon models: towards quantitative analysis of large signaling networks. BMC Syst. Biol. 9 (2015)
Tomoya Mori, Shinsuke Kajioka, Takahiro Uchiya, Ichi Takumi, Hiroshi Matsuo
Experiments of position estimation by BLE beacons on actual situations. GCCE (2015)
Tomoya Mori, Atsuhiro Takasu, Jesper Jansson, Jaewook Hwang, Takeyuki Tamura, Tatsuya Akutsu
Similar Subtree Search Using Extended Tree Inclusion. IEEE Trans. Knowl. Data Eng. 27 (12) (2015)
Takanori Hasegawa, Tomoya Mori, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Tatsuya Akutsu
An Efficient Data Assimilation Schema for Restoration and Extension of Gene Regulatory Networks Using Time-Course Observation Data. J. Comput. Biol. 21 (11) (2014)
Shinsuke Kajioka, Tomoya Mori, Takahiro Uchiya, Ichi Takumi, Hiroshi Matsuo
Experiment of indoor position presumption based on RSSI of Bluetooth LE beacon. GCCE (2014)
Tomoya Mori, Takeyuki Tamura, Daiji Fukagawa, Atsuhiro Takasu, Etsuji Tomita, Tatsuya Akutsu
A Clique-Based Method Using Dynamic Programming for Computing Edit Distance Between Unordered Trees. J. Comput. Biol. 19 (10) (2012)
Tatsuya Akutsu, Tomoya Mori, Takeyuki Tamura, Daiji Fukagawa, Atsuhiro Takasu, Etsuji Tomita
An Improved Clique-Based Method for Computing Edit Distance between Unordered Trees and Its Application to Comparison of Glycan Structures. CISIS (2011)