Paul A. Yushkevich

ORCID

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 52

Top Venues

Publications

Pulkit Khandelwal, Michael Tran Duong, Constanza Fuentes, Amanda Denning, Winifred Trotman, Ranjit Ittyerah, Alejandra Bahena, Theresa Schuck, Marianna Gabrielyan, Karthik Prabhakaran, Daniel T. Ohm, Gabor Mizsei, John L. Robinson, Mónica Muñoz López, John A. Detre, Edward B. Lee, David J. Irwin, Corey McMillan, M. Dylan Tisdall, Sandhitsu R. Das, David A. Wolk, Paul A. Yushkevich
Surface-based parcellation and vertex-wise analysis of ultra high-resolution ex vivo 7 tesla MRI in neurodegenerative diseases. CoRR (2024)
Pulkit Khandelwal, Michael Tran Duong, Shokufeh Sadaghiani, Sydney Lim, Amanda Denning, Eunice Chung, Sadhana Ravikumar, Sanaz Arezoumandan, Claire Peterson, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, Winifred Trotman, John L. Robinson, Daniel T. Ohm, Edward B. Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David J. Irwin, John A. Detre, M. Dylan Tisdall, Sandhitsu R. Das, Laura E. M. Wisse, David A. Wolk, Paul A. Yushkevich
Automated deep learning segmentation of high-resolution 7 T ex vivo MRI for quantitative analysis of structure-pathology correlations in neurodegenerative diseases. CoRR (2023)
Long Xie, Laura E. M. Wisse, Jiancong Wang, Sadhana Ravikumar, Pulkit Khandelwal, Trevor Glenn, Anica Luther, Sydney Lim, David A. Wolk, Paul A. Yushkevich
Deep label fusion: A generalizable hybrid multi-atlas and deep convolutional neural network for medical image segmentation. Medical Image Anal. 83 (2023)
Sadhana Ravikumar, Ranjit Ittyerah, Sydney Lim, Long Xie, Sandhitsu R. Das, Pulkit Khandelwal, Laura E. M. Wisse, Madigan L. Bedard, John L. Robinson, Terry Schuck, Murray Grossman, John Q. Trojanowski, Edward B. Lee, M. Dylan Tisdall, Karthik Prabhakaran, John A. Detre, David J. Irwin, Winifred Trotman, Gabor Mizsei, Emilio Artacho-Pérula, Maria Mercedes Iñiguez de Onzoño Martin, María del Mar Arroyo Jiménez, Mónica Muñoz López, Francisco Javier Molina Romero, Maria del Pilar Marcos Rabal, Sandra Cebada Sánchez, José Carlos Delgado González, Carlos de la Rosa Prieto, Marta Córcoles Parada, David A. Wolk, Ricardo Insausti, Paul A. Yushkevich
Improved Segmentation of Deep Sulci in Cortical Gray Matter Using a Deep Learning Framework Incorporating Laplace's Equation. IPMI (2023)
Sadhana Ravikumar, Ranjit Ittyerah, Sydney Lim, Long Xie, Sandhitsu R. Das, Pulkit Khandelwal, Laura E. M. Wisse, Madigan L. Bedard, John L. Robinson, Terry Schuck, Murray Grossman, John Q. Trojanowski, Edward B. Lee, M. Dylan Tisdall, Karthik Prabhakaran, John A. Detre, David J. Irwin, Winifred Trotman, Gabor Mizsei, Emilio Artacho-Pérula, Maria Mercedes Iñiguez de Onzoño Martin, María del Mar Arroyo Jiménez, Monica Muñoz López, Francisco Javier Molina Romero, Maria del Pilar Marcos Rabal, Sandra Cebada Sánchez, José Carlos Delgado González, Carlos de la Rosa Prieto, Marta Córcoles Parada, David A. Wolk, Ricardo Insausti, Paul A. Yushkevich
Improved Segmentation of Deep Sulci in Cortical Gray Matter Using a Deep Learning Framework Incorporating Laplace's Equation. CoRR (2023)
Michael Tran Duong, Sandhitsu R. Das, Pulkit Khandelwal, Xueying Lyu, Long Xie, Paul A. Yushkevich, David A. Wolk, Ilya M. Nasrallah
Image-to-Image Translation Between Tau Pathology and Neuronal Metabolism PET in Alzheimer Disease with Multi-domain Contrastive Learning. MLCN@MICCAI (2023)
Mengjin Dong, Long Xie, Sandhitsu R. Das, Jiancong Wang, Laura E. M. Wisse, Robin DeFlores, David A. Wolk, Paul A. Yushkevich
Regional Deep Atrophy: a Self-Supervised Learning Method to Automatically Identify Regions Associated With Alzheimer's Disease Progression From Longitudinal MRI. CoRR (2023)
Ahmed H. Aly, Pulkit Khandelwal, Abdullah H. Aly, Takayuki Kawashima, Kazuki Mori, Yoshiaki Saito, Judy Hung, Joseph H. Gorman III, Alison M. Pouch, Robert C. Gorman, Paul A. Yushkevich
Fully Automated 3D Segmentation and Diffeomorphic Medial Modeling of the Left Ventricle Mitral Valve Complex in Ischemic Mitral Regurgitation. Medical Image Anal. 80 (2022)
Yifan Wu, Tom Z. Jiahao, Jiancong Wang, Paul A. Yushkevich, M. Ani Hsieh, James C. Gee
NODEO: A Neural Ordinary Differential Equation Based Optimization Framework for Deformable Image Registration. CVPR (2022)
Long Xie, Laura E. M. Wisse, Jiancong Wang, Sadhana Ravikumar, Trevor Glenn, Anica Luther, Sydney Lim, David A. Wolk, Paul A. Yushkevich
Deep Label Fusion: A 3D End-To-End Hybrid Multi-atlas Segmentation and Deep Learning Pipeline. IPMI (2021)
Sadhana Ravikumar, Laura E. M. Wisse, Sydney Lim, David J. Irwin, Ranjit Ittyerah, Long Xie, Sandhitsu R. Das, Edward B. Lee, M. Dylan Tisdall, Karthik Prabhakaran, John A. Detre, Gabor Mizsei, John Q. Trojanowski, John L. Robinson, Theresa Schuck, Murray Grossman, Emilio Artacho-Pérula, Maria Mercedes Iñiguez de Onzoño Martin, María del Mar Arroyo Jiménez, Mónica Muñoz López, Francisco Javier Molina Romero, Maria del Pilar Marcos Rabal, Sandra Cebada Sánchez, José Carlos Delgado González, Carlos de la Rosa Prieto, Marta Córcoles Parada, David A. Wolk, Ricardo Insausti, Paul A. Yushkevich
Unfolding the Medial Temporal Lobe Cortex to Characterize Neurodegeneration Due to Alzheimer's Disease Pathology Using Ex vivo Imaging. MLCN@MICCAI (2021)
Yifan Wu, Tom Z. Jiahao, Jiancong Wang, Paul A. Yushkevich, James C. Gee, M. Ani Hsieh
Deformable Image Registration using Neural ODEs. CoRR (2021)
Long Xie, Laura E. M. Wisse, Jiancong Wang, Sadhana Ravikumar, Trevor Glenn, Anica Luther, Sydney Lim, David A. Wolk, Paul A. Yushkevich
Deep Label Fusion: A 3D End-to-End Hybrid Multi-Atlas Segmentation and Deep Learning Pipeline. CoRR (2021)
Pulkit Khandelwal, Shokufeh Sadaghiani, Sadhana Ravikumar, Sydney Lim, Sanaz Arezoumandan, Claire Peterson, Eunice Chung, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John L. Robinson, Daniel T. Ohm, Edward B. Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David J. Irwin, M. Dylan Tisdall, Sandhitsu R. Das, Laura E. M. Wisse, David A. Wolk, Paul A. Yushkevich
Gray Matter Segmentation in Ultra High Resolution 7 Tesla ex vivo T2w MRI of Human Brain Hemispheres. CoRR (2021)
Mengjin Dong, Long Xie, Sandhitsu R. Das, Jiancong Wang, Laura E. M. Wisse, Robin DeFlores, David A. Wolk, Paul A. Yushkevich
DeepAtrophy: Teaching a neural network to detect progressive changes in longitudinal MRI of the hippocampal region in Alzheimer's disease. NeuroImage 243 (2021)
Pulkit Khandelwal, Paul A. Yushkevich
Domain Generalizer: A Few-Shot Meta Learning Framework for Domain Generalization in Medical Imaging. DART/DCL@MICCAI (2020)
Pulkit Khandelwal, Paul A. Yushkevich
Domain Generalizer: A Few-shot Meta Learning Framework for Domain Generalization in Medical Imaging. CoRR (2020)
Alison M. Pouch, Paul A. Yushkevich, Abdullah H. Aly, Alexander H. F. Woltersom, Edidiong Okon, Ahmed H. Aly, Natalie Yushkevich, Shobhana Parameshwaran, Jiancong Wang, Baris U. Oguz, James C. Gee, Ipek Oguz, Nadav Schwartz
Automated Meshing of Anatomical Shapes for Deformable Medial Modeling: Application to the Placenta in 3D Ultrasound. ISBI (2020)
Mengjin Dong, Long Xie, Sandhitsu R. Das, Jiancong Wang, Laura E. M. Wisse, Robin DeFlores, David A. Wolk, Paul A. Yushkevich
DeepAtrophy: Teaching a Neural Network to Differentiate Progressive Changes from Noise on Longitudinal MRI in Alzheimer's Disease. CoRR (2020)
Paul A. Yushkevich, Maria Mercedes Iñiguez de Onzoño Martin, Ranjit Ittyerah, Sydney Lim, Madigan Lavery, Jiancong Wang, Ling Yu Hung, Nicolas Vergnet, Sadhana Ravikumar, Long Xie, Mengjin Dong, Robin DeFlores, Salena Cui, Lauren McCollum, Daniel T. Ohm, John L. Robinson, Theresa Schuck, Murray Grossman, M. Dylan Tisdall, Karthik Prabhakaran, Gabor Mizsei, Sandhitsu R. Das, Emilio Artacho-Pérula, María del Mar Arroyo Jiménez, Mónica Muñoz López, Maria del Pilar Marcos Rabal, Francisco Javier Molina Romero, Edward B. Lee, John Q. Trojanowski, Laura E. M. Wisse, David A. Wolk, David J. Irwin, Ricardo Insausti
3D Mapping of TAU Neurofibrillary Tangle Pathology in the Human Medial Temporal Lobe. ISBI (2020)
Jirí Borovec, Jan Kybic, Ignacio Arganda-Carreras, Dmitry V. Sorokin, Gloria Bueno, Alexander V. Khvostikov, Spyridon Bakas, Eric I-Chao Chang, Stefan Heldmann, Kimmo Kartasalo, Leena Latonen, Johannes Lotz, Michelle Noga, Sarthak Pati, Kumaradevan Punithakumar, Pekka Ruusuvuori, Andrzej Skalski, Nazanin Tahmasebi, Masi Valkonen, Ludovic Venet, Yizhe Wang, Nick Weiss, Marek Wodzinski, Yu Xiang, Yan Xu, Yan Yan, Paul A. Yushkevich, Shengyu Zhao, Arrate Muñoz-Barrutia
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge. IEEE Trans. Medical Imaging 39 (10) (2020)
Sadhana Ravikumar, Laura E. M. Wisse, Ranjit Ittyerah, Sydney Lim, Madigan Lavery, Long Xie, John L. Robinson, Theresa Schuck, Murray Grossman, Edward B. Lee, M. Dylan Tisdall, Karthik Prabhakaran, John A. Detre, Sandhitsu R. Das, Gabor Mizsei, Emilio Artacho-Pérula, Maria Mercedes Iñiguez de Onzoño Martin, María del Mar Arroyo Jiménez, Mónica Muñoz López, Francisco Javier Molina Romero, Maria del Pilar Marcos Rabal, David J. Irwin, John Q. Trojanowski, David A. Wolk, Ricardo Insausti, Paul A. Yushkevich
Building an Ex Vivo Atlas of the Earliest Brain Regions Affected by Alzheimer's Disease Pathology. ISBI (2020)
Paul A. Yushkevich, Ahmed H. Aly, Jiancong Wang, Long Xie, Robert C. Gorman, Laurent Younes, Alison M. Pouch
Diffeomorphic Medial Modeling. IPMI (2019)
Ludovic Venet, Sarthak Pati, Paul A. Yushkevich, Spyridon Bakas
Accurate and Robust Alignment of Variable-stained Histologic Images Using a General-purpose Greedy Diffeomorphic Registration Tool. CoRR (2019)
Long Xie, Jiancong Wang, Mengjin Dong, David A. Wolk, Paul A. Yushkevich
Improving Multi-atlas Segmentation by Convolutional Neural Network Based Patch Error Estimation. MICCAI (3) (2019)
Paul A. Yushkevich, Ahmed H. Aly, Jiancong Wang, Long Xie, Robert C. Gorman, Alison M. Pouch, Laurent Younes
Diffeomorphic Medial Modeling. CoRR (2019)
Sarthak Pati, Ashish Singh, Saima Rathore, Aimilia Gastounioti, Mark Bergman, Phuc Ngo, Sung Min Ha, Dimitrios Bounias, James Minock, Grayson Murphy, Hongming Li, Amit Bhattarai, Adam Wolf, Patmaa Sridaran, Ratheesh Kalarot, Hamed Akbari, Aristeidis Sotiras, Siddhesh P. Thakur, Ragini Verma, Russell T. Shinohara, Paul A. Yushkevich, Yong Fan, Despina Kontos, Christos Davatzikos, Spyridon Bakas
The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview. BrainLes@MICCAI (2) (2019)
Paul A. Yushkevich, Artem Pashchinskiy, Ipek Oguz, Suyash Mohan, J. Eric Schmitt, Joel M. Stein, Dzenan Zukic, Jared Vicory, Matthew McCormick, Natalie Yushkevich, Nadav Schwartz, Yang Gao, Guido Gerig
User-Guided Segmentation of Multi-modality Medical Imaging Datasets with ITK-SNAP. Neuroinformatics 17 (1) (2019)
Sadhana Ravikumar, Laura E. M. Wisse, Yang Gao, Guido Gerig, Paul A. Yushkevich
Facilitating Manual Segmentation of 3D Datasets Using Contour And Intensity Guided Interpolation. ISBI (2019)
Jiancong Wang, Long Xie, Paul A. Yushkevich, James C. Gee
Barnes-Hut Approximation for Point SetGeodesic Shooting. CoRR (2019)
Baris U. Oguz, Jiancong Wang, Natalie Yushkevich, Alison M. Pouch, James C. Gee, Paul A. Yushkevich, Nadav Schwartz, Ipek Oguz
Combining Deep Learning and Multi-atlas Label Fusion for Automated Placenta Segmentation from 3DUS. DATRA/PIPPI@MICCAI (2018)
Long Xie, Laura E. M. Wisse, Sandhitsu R. Das, Ranjit Ittyerah, Jiancong Wang, David A. Wolk, Paul A. Yushkevich
Characterizing Anatomical Variability and Alzheimer's Disease Related Cortical Thinning in the Medial Temporal Lobe Using Graph-Based Groupwise Registration and Point Set Geodesic Shooting. ShapeMI@MICCAI (2018)
Daniel H. Adler, Laura E. M. Wisse, Ranjit Ittyerah, John Pluta, Song-Lin Ding, Long Xie, Jiancong Wang, Salmon Kadivar, John L. Robinson, Theresa Schuck, John Q. Trojanowski, Murray Grossman, John A. Detre, Mark A. Elliott, Jon B. Toledo, Weixia Liu, Stephen Pickup, Michael I. Miller, Sandhitsu R. Das, David A. Wolk, Paul A. Yushkevich
Characterizing the human hippocampus in aging and Alzheimer's disease using a computational atlas derived from ex vivo MRI and histology. Proc. Natl. Acad. Sci. USA 115 (16) (2018)
Ahmed H. Aly, Abdullah H. Aly, Mahmoud Elrakhawy, Kirlos Haroun, Luis Prieto-Riascos, Robert C. Gorman Jr., Natalie Yushkevich, Yoshiaki Saito, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich, Alison M. Pouch
Semi-automated Image Segmentation of the Midsystolic Left Ventricular Mitral Valve Complex in Ischemic Mitral Regurgitation. STACOM@MICCAI (2018)
Greg M. Fleishman, Alessandra Valcarcel, Dzung L. Pham, Snehashis Roy, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Ipek Oguz
Joint Intensity Fusion Image Synthesis Applied to Multiple Sclerosis Lesion Segmentation. BrainLes@MICCAI (2017)
Long Xie, John Pluta, Sandhitsu R. Das, Laura E. M. Wisse, Hongzhi Wang, Lauren Mancuso, Dasha Kliot, Brian B. Avants, Song-Lin Ding, José V. Manjón, David A. Wolk, Paul A. Yushkevich
Multi-template analysis of human perirhinal cortex in brain MRI: Explicitly accounting for anatomical variability. NeuroImage 144 (2017)
Diliana Pecheva, Paul A. Yushkevich, Dafnis Batalle, Emer J. Hughes, Paul Aljabar, Julia Wurie, Joseph V. Hajnal, A. David Edwards, Daniel C. Alexander, Serena J. Counsell, Hui Zhang
A tract-specific approach to assessing white matter in preterm infants. NeuroImage 157 (2017)
Ipek Oguz, Aaron Carass, Dzung L. Pham, Snehashis Roy, Nagesh Subbana, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Jerry L. Prince
Dice Overlap Measures for Objects of Unknown Number: Application to Lesion Segmentation. BrainLes@MICCAI (2017)
Baris U. Oguz, Russell T. Shinohara, Paul A. Yushkevich, Ipek Oguz
Gradient Boosted Trees for Corrective Learning. MLMI@MICCAI (2017)
Alison M. Pouch, Ahmed H. Aly, Eric Lai, Natalie Yushkevich, Rutger H. Stoffers, Joseph H. Gorman IV, Albert T. Cheung, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich
Spatiotemporal Segmentation and Modeling of the Mitral Valve in Real-Time 3D Echocardiographic Images. MICCAI (1) (2017)
Mengjin Dong, Ipek Oguz, Nagesh Subbana, Peter A. Calabresi, Russell T. Shinohara, Paul A. Yushkevich
Multiple Sclerosis Lesion Segmentation Using Joint Label Fusion. Patch-MI@MICCAI (2017)
Alison M. Pouch, Ahmed H. Aly, Andras Lasso, Alexander V. Nguyen, Adam B. Scanlan, Francis X. McGowan, Gabor Fichtinger, Robert C. Gorman, Joseph H. Gorman III, Paul A. Yushkevich, Matthew A. Jolley
Image Segmentation and Modeling of the Pediatric Tricuspid Valve in Hypoplastic Left Heart Syndrome. FIMH (2017)
Paul A. Yushkevich, Yang Gao, Guido Gerig
ITK-SNAP: An interactive tool for semi-automatic segmentation of multi-modality biomedical images. EMBC (2016)
Long Xie, Laura E. M. Wisse, Sandhitsu R. Das, Hongzhi Wang, David A. Wolk, José V. Manjón, Paul A. Yushkevich
Accounting for the Confound of Meninges in Segmenting Entorhinal and Perirhinal Cortices in T1-Weighted MRI. MICCAI (2) (2016)
Ipek Oguz, Satyananda Kashyap, Hongzhi Wang, Paul A. Yushkevich, Milan Sonka
Globally Optimal Label Fusion with Shape Priors. MICCAI (2) (2016)
Paul A. Yushkevich, Laura E. M. Wisse, Daniel H. Adler, Ranjit Ittyerah, John Pluta, John L. Robinson, Theresa Schuck, John Q. Trojanowski, Murray Grossman, John A. Detre, Mark A. Elliott, Jon B. Toledo, Weixia Liu, Stephen Pickup, Sandhitsu R. Das, David A. Wolk
A framework for informing segmentation of in vivo MRI with information derived from ex vivo imaging: Application in the medial temporal lobe. EMBC (2016)
Ning Yu, Hongzhi Wang, Paul A. Yushkevich
Supervoxel-Based Hierarchical Markov Random Field Framework for Multi-atlas Segmentation. Patch-MI@MICCAI (2016)
Daniel H. Adler, Ranjit Ittyerah, John Pluta, Stephen Pickup, Weixia Liu, David A. Wolk, Paul A. Yushkevich
Probabilistic Atlas of the Human Hippocampus Combining Ex Vivo MRI and Histology. MICCAI (3) (2016)
Long Xie, Suman Sedai, Xi Liang, Colin B. Compas, Hongzhi Wang, Paul A. Yushkevich, Tanveer F. Syeda-Mahmood
Multi-atlas label fusion with augmented atlases for fast and accurate segmentation of cardiac MR images. ISBI (2015)
Paul A. Yushkevich, Robert S. C. Amaral, Jean C. Augustinack, Andrew R. Bender, Jeffrey D. Bernstein, Marina Boccardi, Martina Bocchetta, Alison C. Burggren, Valerie A. Carr, M. Mallar Chakravarty, Gaël Chételat, Ana M. Daugherty, Lila Davachi, Song-Lin Ding, Arne D. Ekstrom, Mirjam I. Geerlings, Abdul Hassan, Yushan Huang, Juan Eugenio Iglesias, Renaud La Joie, Geoffrey A. Kerchner, Karen F. LaRocque, Laura A. Libby, Nikolai Malykhin, Susanne G. Mueller, Rosanna K. Olsen, Daniela J. Palombo, Mansi B. Parekh
Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: Towards a harmonized segmentation protocol. NeuroImage 111 (2015)
David M. Cash, Chris Frost, Leonardo O. Iheme, Devrim Ünay, Melek Kandemir, Jurgen Fripp, Olivier Salvado, Pierrick Bourgeat, Martin Reuter, Bruce Fischl, Marco Lorenzi, Giovanni B. Frisoni, Xavier Pennec, Ronald K. Pierson, Jeffrey L. Gunter, Matthew L. Senjem, Clifford R. Jack Jr., Nicolas Guizard, Vladimir S. Fonov, D. Louis Collins, Marc Modat, M. Jorge Cardoso, Kelvin K. Leung, Hongzhi Wang, Sandhitsu R. Das, Paul A. Yushkevich, Ian B. Malone, Nick C. Fox, Jonathan M. Schott, Sébastien Ourselin
Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge. NeuroImage 123 (2015)
Alison M. Pouch, Sijie Tian, Manabu Takabe, Jiefu Yuan, Robert C. Gorman Jr., Albert T. Cheung, Hongzhi Wang, Benjamin M. Jackson, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich
Medially constrained deformable modeling for segmentation of branching medial structures: Application to aortic valve segmentation and morphometry. Medical Image Anal. 26 (1) (2015)
Daniel H. Adler, John Pluta, Salmon Kadivar, Caryne Craige, James C. Gee, Brian B. Avants, Paul A. Yushkevich
Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI. NeuroImage 84 (2014)
Long Xie, John Pluta, Hongzhi Wang, Sandhitsu R. Das, Lauren Mancuso, Dasha Kliot, Brian B. Avants, Song-Lin Ding, David A. Wolk, Paul A. Yushkevich
Automatic Clustering and Thickness Measurement of Anatomical Variants of the Human Perirhinal Cortex. MICCAI (3) (2014)
Alison M. Pouch, Sijie Tian, Manabu Takabe, Hongzhi Wang, Jiefu Yuan, Albert T. Cheung, Benjamin M. Jackson, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich
Segmentation of the Aortic Valve Apparatus in 3D Echocardiographic Images: Deformable Modeling of a Branching Medial Structure. STACOM (2014)
Alison M. Pouch, Hongzhi Wang, Manabu Takabe, Benjamin M. Jackson, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich, Chandra M. Sehgal
Fully automatic segmentation of the mitral leaflets in 3D transesophageal echocardiographic images using multi-atlas joint label fusion and deformable medial modeling. Medical Image Anal. 18 (1) (2014)
Hongzhi Wang, Paul A. Yushkevich
Multi-atlas Segmentation without Registration: A Supervoxel-Based Approach. MICCAI (3) (2013)
Alison M. Pouch, Hongzhi Wang, Manabu Takabe, Benjamin M. Jackson, Chandra M. Sehgal, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich
Automated Segmentation and Geometrical Modeling of the Tricuspid Aortic Valve in 3D Echocardiographic Images. MICCAI (1) (2013)
Hongzhi Wang, Jung Wook Suh, Sandhitsu R. Das, John Pluta, Caryne Craige, Paul A. Yushkevich
Multi-Atlas Segmentation with Joint Label Fusion. IEEE Trans. Pattern Anal. Mach. Intell. 35 (3) (2013)
Hongzhi Wang, Paul A. Yushkevich
Multi-atlas segmentation with joint label fusion and corrective learning - an open source implementation. Frontiers Neuroinformatics 7 (2013)
Hongzhi Wang, Paul A. Yushkevich
Groupwise Segmentation with Multi-atlas Joint Label Fusion. MICCAI (1) (2013)
Hongzhi Wang, Alison M. Pouch, Manabu Takabe, Benjamin M. Jackson, Joseph H. Gorman III, Robert C. Gorman, Paul A. Yushkevich
Multi-atlas Segmentation with Robust Label Transfer and Label Fusion. IPMI (2013)
Paul A. Yushkevich, Hui Gary Zhang
Deformable Modeling Using a 3D Boundary Representation with Quadratic Constraints on the Branching Structure of the Blum Skeleton. IPMI (2013)
Hongzhi Wang, Paul A. Yushkevich
Guiding Automatic Segmentation with Multiple Manual Segmentations. MICCAI (2) (2012)
Daniel H. Adler, Alex Yang Liu, John Pluta, Salmon Kadivar, Sylvia Orozco, Hongzhi Wang, James C. Gee, Brian B. Avants, Paul A. Yushkevich
Reconstruction of the human hippocampus in 3D from histology and high-resolution ex-vivo MRI. ISBI (2012)
Hongzhi Wang, Paul A. Yushkevich
Spatial bias in multi-atlas based segmentation. CVPR (2012)
Paul A. Yushkevich, Hongzhi Wang, John Pluta, Brian B. Avants
From label fusion to correspondence fusion: A new approach to unbiased groupwise registration. CVPR (2012)
Sandhitsu R. Das, Brian B. Avants, John Pluta, Hongzhi Wang, Jung Wook Suh, Michael W. Weiner, Susanne G. Mueller, Paul A. Yushkevich
Measuring longitudinal change in the hippocampal formation from in vivo high-resolution T2-weighted MRI. NeuroImage 60 (2) (2012)
Hongzhi Wang, Paul A. Yushkevich
Dependency prior for multi-atlas label fusion. ISBI (2012)
Hongzhi Wang, Jung Wook Suh, Sandhitsu R. Das, John Pluta, Murat Altinay, Paul A. Yushkevich
Regression-based label fusion for multi-atlas segmentation. CVPR (2011)
Hongzhi Wang, Jung Wook Suh, John Pluta, Murat Altinay, Paul A. Yushkevich
Optimal Weights for Multi-atlas Label Fusion. IPMI (2011)
Hongzhi Wang, Jung Wook Suh, Sandhitsu R. Das, Murat Altinay, John Pluta, Paul A. Yushkevich
Hippocampus segmentation using a stable maximum likelihood classifier ensemble algorithm. ISBI (2011)
Sandhitsu R. Das, Dawn Mechanic-Hamilton, John Pluta, Marc Korczykowski, John A. Detre, Paul A. Yushkevich
Heterogeneity of functional activation during memory encoding across hippocampal subfields in temporal lobe epilepsy. NeuroImage 58 (4) (2011)
Hongzhi Wang, Sandhitsu R. Das, Jung Wook Suh, Murat Altinay, John Pluta, Caryne Craige, Brian B. Avants, Paul A. Yushkevich
A learning-based wrapper method to correct systematic errors in automatic image segmentation: Consistently improved performance in hippocampus, cortex and brain segmentation. NeuroImage 55 (3) (2011)
Nicholas J. Tustison, Brian B. Avants, Philip A. Cook, Yuanjie Zheng, Alexander Egan, Paul A. Yushkevich, James C. Gee
N4ITK: Improved N3 Bias Correction. IEEE Trans. Medical Imaging 29 (6) (2010)
Paul A. Yushkevich, Hongzhi Wang, John Pluta, Sandhitsu R. Das, Caryne Craige, Brian B. Avants, Michael W. Weiner, Susanne G. Mueller
Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI. NeuroImage 53 (4) (2010)
Suyash P. Awate, Paul A. Yushkevich, Zhuang Song, Daniel J. Licht, James C. Gee
Cerebral cortical folding analysis with multivariate modeling and testing: Studies on gender differences and neonatal development. NeuroImage 53 (2) (2010)
Hui Sun, Alejandro F. Frangi, Hongzhi Wang, Federico Sukno, Catalina Tobon-Gomez, Paul A. Yushkevich
Automatic Cardiac MRI Segmentation Using a Biventricular Deformable Medial Model. MICCAI (1) (2010)
Hongzhi Wang, Sandhitsu R. Das, John Pluta, Caryne Craige, Murat Altinay, Brian B. Avants, Michael Weiner, Susanne G. Mueller, Paul A. Yushkevich
: Improving Medical Image Segmentation via Bias Correction. MICCAI (3) (2010)
Paul A. Yushkevich, Brian B. Avants, Sandhitsu R. Das, John Pluta, Murat Altinay, Caryne Craige
Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: An illustration in ADNI 3 T MRI data. NeuroImage 50 (2) (2010)
Brian B. Avants, Paul A. Yushkevich, John Pluta, David Minkoff, Marc Korczykowski, John A. Detre, James C. Gee
The optimal template effect in hippocampus studies of diseased populations. NeuroImage 49 (3) (2010)
Hui Zhang, Suyash P. Awate, Sandhitsu R. Das, John H. Woo, Elias R. Melhem, James C. Gee, Paul A. Yushkevich
A tract-specific framework for white matter morphometry combining macroscopic and microscopic tract features. Medical Image Anal. 14 (5) (2010)
Hongzhi Wang, Sandhitsu R. Das, John Pluta, Caryne Craige, Murat Altinay, Michael Weiner, Susanne G. Mueller, Paul A. Yushkevich
Shape-based semi-automatic hippocampal subfield segmentation with learning-based bias removal. ISBI (2010)
Hui Zhang, Paul A. Yushkevich, Daniel Rueckert, James C. Gee
A Computational White Matter Atlas for Aging with Surface-Based Representation of Fasciculi. WBIR (2010)
Hui Zhang, Paul A. Yushkevich, Daniel Rueckert, James C. Gee
Tensor-Based Morphometry of Fibrous Structures with Application to Human Brain White Matter. MICCAI (1) (2009)
Hui Sun, Catalina Tobon-Gomez, Sandhitsu R. Das, Marina Huguet, Paul A. Yushkevich, Alejandro F. Frangi
Ventricular Wall Thickness Analysis in Acute Myocardial Infarction and Hypertrophic Cardiomyopathy. ISBI (2009)
Paul A. Yushkevich, Brian B. Avants, John Pluta, Sandhitsu R. Das, David Minkoff, Dawn Mechanic-Hamilton, Simon Glynn, Stephen Pickup, Weixia Liu, James C. Gee, Murray Grossman, John A. Detre
A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T. NeuroImage 44 (2) (2009)
Suyash P. Awate, Paul A. Yushkevich, Zhuang Song, Daniel J. Licht, James C. Gee
Multivariate High-Dimensional Cortical Folding Analysis, Combining Complexity and Shape, in Neonates with Congenital Heart Disease. IPMI (2009)
Paul A. Yushkevich
Continuous medial representation of brain structures using the biharmonic PDE. NeuroImage 45 (1) (2009)
Hui Zhang, Suyash P. Awate, Sandhitsu R. Das, John H. Woo, Elias R. Melhem, James C. Gee, Paul A. Yushkevich
A Tract-Specific Framework for White Matter Morphometry Combining Macroscopic and Microscopic Tract Features. MICCAI (1) (2009)
Suyash P. Awate, Paul A. Yushkevich, Daniel J. Licht, James C. Gee
Gender Differences in Cerebral Cortical Folding: Multivariate Complexity-Shape Analysis with Insights into Handling Brain-Volume Differences. MICCAI (1) (2009)
Suyash P. Awate, Lawrence Win, Paul A. Yushkevich, Robert T. Schultz, James C. Gee
3D Cerebral Cortical Morphometry in Autism: Increased Folding in Children and Adolescents in Frontal, Parietal, and Temporal Lobes. MICCAI (1) (2008)
Hui Sun, Brian B. Avants, Alejandro F. Frangi, Sebastián Ordas, James C. Gee, Paul A. Yushkevich
Branching medial models for cardiac shape representation. ISBI (2008)
Hui Zhang, Paul A. Yushkevich, Tony J. Simon, James C. Gee
Surface-based modeling of white matter fasciculi with orientation encoding. ISBI (2008)
Sandhitsu R. Das, Dawn Mechanic-Hamilton, Marc Korczykowski, Brian B. Avants, John A. Detre, James C. Gee, Paul A. Yushkevich
Spatial correspondence based asymmetry analysis in FMRI. ISBI (2008)
Paul A. Yushkevich, Hui Zhang, Tony J. Simon, James C. Gee
Structure-specific statistical mapping of white matter tracts. NeuroImage 41 (2) (2008)
Hui Sun, Brian B. Avants, Alejandro F. Frangi, Federico Sukno, James C. Gee, Paul A. Yushkevich
Cardiac Medial Modeling and Time-Course Heart Wall Thickness Analysis. MICCAI (2) (2008)
Paul A. Yushkevich, Brian B. Avants, John Pluta, David Minkoff, John A. Detre, Murray Grossman, James C. Gee
Shape-Based Alignment of Hippocampal Subfields: Evaluation in Postmortem MRI. MICCAI (1) (2008)
Paul A. Yushkevich, Brian B. Avants, John Pluta, David Minkoff, Stephen Pickup, Weixia Liu, John A. Detre, Murray Grossman, James C. Gee
Building an atlas of hippocampal subfields using postmortem MRI. ISBI (2008)
Hui Sun, Paul A. Yushkevich, Hui Zhang, Philip A. Cook, Jeffrey T. Duda, Tony J. Simon, James C. Gee
Shape-Based Normalization of the Corpus Callosum for DTI Connectivity Analysis. IEEE Trans. Medical Imaging 26 (9) (2007)

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Paul A. Yushkevich