Jan Kybic

Publication Activity (10 Years)

Years Active: 1996-2023
Publications (10 Years): 35

Top Topics

Microscopy Images

Top Venues

Medical Imaging: Image Processing

Publications

Denis Barucic, Jan Kybic
Learning to Segment From Object Thickness Annotations. ISBI (2023)
Denis Barucic, Jan Kybic
Learning to Segment from Object Sizes. ITAT (2022)
Denis Barucic, Jan Kybic
Fast Learning from Label Proportions with Small Bags. ICIP (2022)
Denis Barucic, Sumit Kaushik, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch
Characterization of drug effects on cell cultures from phase-contrast microscopy images. Comput. Biol. Medicine 151 (Part) (2022)
Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.
Biomedical image analysis competitions: The state of current participation practice. CoRR (2022)
Denis Barucic, Jan Kybic
Learning to segment from object sizes. CoRR (2022)
Hana Mertanová, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch
Learning to segment cell nuclei in phase-contrast microscopy from fluorescence images for drug discovery. Medical Imaging: Image Processing (2022)
Denis Barucic, Jan Kybic
Fast learning from label proportions with small bags. CoRR (2021)
Denis Barucic, Jan Kybic, Olga Teplá, Zinovij Topurko, Irena Kratochvílová
Automatic evaluation of human oocyte developmental potential from microscopy images. CoRR (2021)
Sumit Kaushik, Jan Kybic, Avinash Bansal, Temesgen Bihonegn, Jan Slovak
Potential Biomarkers From Positive Definite 4th Order Tensors In Hardi. ISBI (2021)
Jan Hering, Jan Kybic
Generalized Multiple Instance Learning for Cancer Detection in Digital Histopathology. ICIAR (2) (2020)
Jan Hering, Jan Kybic
Multiple Instance Learning Via Deep Hierarchical Exploration for Histology Image Classification. ISBI (2020)
Jirí Borovec, Jan Kybic, Ignacio Arganda-Carreras, Dmitry V. Sorokin, Gloria Bueno, Alexander V. Khvostikov, Spyridon Bakas, Eric I-Chao Chang, Stefan Heldmann, Kimmo Kartasalo, Leena Latonen, Johannes Lotz, Michelle Noga, Sarthak Pati, Kumaradevan Punithakumar, Pekka Ruusuvuori, Andrzej Skalski, Nazanin Tahmasebi, Masi Valkonen, Ludovic Venet, Yizhe Wang, Nick Weiss, Marek Wodzinski, Yu Xiang, Yan Xu, Yan Yan, Paul A. Yushkevich, Shengyu Zhao, Arrate Muñoz-Barrutia
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge. IEEE Trans. Medical Imaging 39 (10) (2020)
Miguel Amável Pinheiro, Jan Kybic
Incremental B-spline deformation model for geometric graph matching. ISBI (2018)
Jan Kybic, Jirí Borovec
Fast Registration by Boundary Sampling and Linear Programming. MICCAI (1) (2018)
Jan Hering, Jan Kybic, Lukás Lambert
Detecting multiple myeloma via generalized multiple-instance learning. Medical Imaging: Image Processing (2018)
Przemyslaw Glowacki, Miguel Amável Pinheiro, Agata Mosinska, Engin Türetken, Daniel Lebrecht, Raphael Sznitman, Anthony Holtmaat, Jan Kybic, Pascal Fua
Reconstructing Evolving Tree Structures in Time Lapse Sequences by Enforcing Time-Consistency. IEEE Trans. Pattern Anal. Mach. Intell. 40 (3) (2018)
Jirí Borovec, Arrate Muñoz-Barrutia, Jan Kybic
Benchmarking of Image Registration Methods for Differently Stained Histological Slides. ICIP (2018)
Jirí Borovec, Jan Svihlík, Jan Kybic, David Habart
Supervised and unsupervised segmentation using superpixels, model estimation, and graph cut. J. Electronic Imaging 26 (6) (2017)
Jirí Borovec, Jan Kybic, Rodrigo Nava
Detection and Localization of Drosophila Egg Chambers in Microscopy Images. MLMI@MICCAI (2017)
Jimena Olveres, Rodrigo Nava, Boris Escalante-Ramírez, Enrique Vallejo, Jan Kybic
Left ventricle Hermite-based segmentation. Comput. Biol. Medicine 87 (2017)
Jirí Borovec, Jan Kybic, Akihiro Sugimoto
Region growing using superpixels with learned shape prior. J. Electronic Imaging 26 (6) (2017)
Miguel Amável Pinheiro, Jan Kybic, Pascal Fua
Geometric Graph Matching Using Monte Carlo Tree Search. IEEE Trans. Pattern Anal. Mach. Intell. 39 (11) (2017)
Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert, Zuzana Mecková
Fully automated classification of bone marrow infiltration in low-dose CT of patients with multiple myeloma based on probabilistic density model and supervised learning. Comput. Biol. Medicine 71 (2016)
Jan Svihlík, Jan Kybic, David Habart
Automated separation of merged Langerhans islets. Medical Imaging: Image Processing (2016)
Jirí Borovec, Jan Kybic
Binary Pattern Dictionary Learning for Gene Expression Representation in Drosophila Imaginal Discs. ACCV Workshops (2) (2016)
Jan Svihlík, Jan Kybic, David Habart, Hanna Hlushak, Jirí Dvorák, Barbora Radochová
Langerhans Islet Volume Estimation from 3D Optical Projection Tomography. ACCV Workshops (2) (2016)
Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez
Characterization of hematologic malignancies based on discrete orthogonal moments. IPTA (2016)
Jirí Dvorák, Jan Svihlík, David Habart, Jan Kybic
Comparison of volume estimation methods for pancreatic islet cells. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2016)
Miguel Amável Pinheiro, Jan Kybic
Geometrical graph matching using Monte Carlo tree search. ICIP (2015)
Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez
Classification of Tumor Epithelium and Stroma in Colorectal Cancer Based on Discrete Tchebichef Moments. CLIP@MICCAI (2015)
Rodrigo Nava, Jan Kybic
Supertexton-based segmentation in early Drosophila oogenesis. ICIP (2015)
Jan Kybic, Martin Dolejsi, Jirí Borovec
Fast registration of segmented images by normal sampling. CVPR Workshops (2015)
Eduard Serradell, Miguel Amável Pinheiro, Raphael Sznitman, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua
Non-Rigid Graph Registration Using Active Testing Search. IEEE Trans. Pattern Anal. Mach. Intell. 37 (3) (2015)
Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert
Automatic detection of bone marrow infiltration by multiple myeloma detection in low-dose CT. ICIP (2015)
Jan Kybic
Registration of segmented histological images using thin plate splines and belief propagation. Medical Imaging: Image Processing (2014)
Przemyslaw Glowacki, Miguel Amável Pinheiro, Engin Türetken, Raphael Sznitman, Daniel Lebrecht, Jan Kybic, Anthony Holtmaat, Pascal Fua
Reconstructing Evolving Tree Structures in Time Lapse Sequences. CVPR (2014)
Jan Svihlík, Jan Kybic, David Habart, Zuzana Berková, Peter Girman, Jan Kríz, Klára Zacharovová
Classification of microscopy images of Langerhans islets. Medical Imaging: Image Processing (2014)
Thomas Dietenbeck, François Varray, Jan Kybic, Olivier Basset, Christian Cachard
Neuromuscular fiber segmentation through particle filtering and discrete optimization. Medical Imaging: Image Processing (2014)
Jan Kybic, Jirí Borovec
Automatic simultaneous segmentation and fast registration of histological images. ISBI (2014)
Miguel Amável Pinheiro, Jan Kybic
Path Descriptors for Geometric Graph Matching and Registration. ICIAR (1) (2014)
Laura Fernandez-de-Manuel, Gert Wollny, Jan Kybic, Daniel Jimenez-Carretero, Jose M. Tellado, Enrique Ramon, Manuel Desco, Andrés Santos, Javier Pascau, María J. Ledesma-Carbayo
Organ-focused mutual information for nonrigid multimodal registration of liver CT and Gd-EOB-DTPA-enhanced MRI. Medical Image Anal. 18 (1) (2014)
Marian Uhercik, Jan Kybic, Yue Zhao, Christian Cachard, Hervé Liebgott
Line filtering for surgical tool localization in 3D ultrasound images. Comput. Biol. Medicine 43 (12) (2013)
Miguel Amável Pinheiro, Raphael Sznitman, Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua
Active Testing Search for Point Cloud Matching. IPMI (2013)
Jirí Borovec, Jan Kybic, Michael Busta, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia
Registration of multiple stained histological sections. ISBI (2013)
Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua
Robust elastic 2D/3D geometric graph matching. Medical Imaging: Image Processing (2012)
Eduard Serradell, Przemyslaw Glowacki, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua
Robust non-rigid registration of 2D and 3D graphs. CVPR (2012)
Jan Kybic, Ivan Vnucko
Approximate all nearest neighbor search for high dimensional entropy estimation for image registration. Signal Process. 92 (5) (2012)
François Varray, Christian Cachard, Jan Kybic, Anthony Novell, Ayache Bouakaz, Olivier Basset
A multi-frequency approach to increase the native resolution of ultrasound images. EUSIPCO (2012)
Juan D. García-Arteaga, Jan Kybic, Wenjing Li
Automatic colposcopy video tissue classification using higher order entropy-based image registration. Comput. Biol. Medicine 41 (10) (2011)
Jan Kybic, Claudia Nieuwenhuis
Bootstrap optical flow confidence and uncertainty measure. Comput. Vis. Image Underst. 115 (10) (2011)
Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard
Model Fitting Using RANSAC for Surgical Tool Localization in 3-D Ultrasound Images. IEEE Trans. Biomed. Eng. 57 (8) (2010)
Jan Kybic
Bootstrap Resampling for Image Registration Uncertainty Estimation Without Ground Truth. IEEE Trans. Image Process. 19 (1) (2010)
Jef Vandemeulebroucke, Jan Kybic, Patrick Clarysse, David Sarrut
Respiratory Motion Estimation from Cone-Beam Projections Using a Prior Model. MICCAI (1) (2009)
Martin Dolejsi, Jan Kybic, Michal Polovincak, Stanislav Tuma
The Lung TIME: annotated lung nodule dataset and nodule detection framework. Medical Imaging: Computer-Aided Diagnosis (2009)
Jan Kybic, Jakub Kratky
Discrete curvature calculation for fast level set segmentation. ICIP (2009)
Jan Kybic
Fast no ground truth image registration accuracy evaluation: Comparison of bootstrap and Hessian approaches. ISBI (2008)
Martin Dolejsi, Jan Kybic, Stanislav Tuma, Michal Polovincak
Reducing false positive responses in lung nodule detector system by asymmetric adaboost. ISBI (2008)
Elisabeth Brusseau, Jan Kybic, Jean-François Deprez, Olivier Basset
2-D Locally Regularized Tissue Strain Estimation From Radio-Frequency Ultrasound Images: Theoretical Developments and Results on Experimental Data. IEEE Trans. Medical Imaging 27 (2) (2008)
Juan D. García-Arteaga, Jan Kybic
Regional image similarity criteria based on the Kozachenko-Leonenko entropy estimator. CVPR Workshops (2008)
Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard
Multi-resolution parallel integral projection for fast localization of a straight electrode in 3D ultrasound images. ISBI (2008)
Jakub Kratky, Jan Kybic
Three-dimensional segmentation of bones from CT and MRI using fast level sets. Medical Imaging: Image Processing (2008)
Juan D. García-Arteaga, Jan Kybic
Automatic landmark detection for cervical image registration validation. Medical Imaging: Computer-Aided Diagnosis (2007)
Martin Dolejsi, Jan Kybic
Automatic two-step detection of pulmonary nodules. Medical Imaging: Computer-Aided Diagnosis (2007)
Juan D. García-Arteaga, Jan Kybic, Jia Gu, Wenjing Li
Geometric and information constraints for automatic landmark selection in colposcopy sequences. VISAPP (1) (2007)
Jan Petr, Jan Kybic
Continuous criterion for parallel MRI reconstruction using B-spline approximation (PROBER). Medical Imaging: Image Processing (2007)
Jan Kybic
-NN Entropy Estimator. IPMI (2007)
Ignacio Arganda-Carreras, Carlos Oscar Sánchez Sorzano, Roberto Marabini, José María Carazo, Carlos Ortiz-de-Solorzano, Jan Kybic
Consistent and Elastic Registration of Histological Sections Using Vector-Spline Regularization. CVAMIA (2006)
Jan Kybic
Incremental Updating of Nearest Neighbor-Based High-Dimensional Entropy Estimation. ICASSP (3) (2006)
Jan Kybic, Daniel Smutek
Image Registration Accuracy Estimation Without Ground Truth Using Bootstrap. CVAMIA (2006)
Jan Kybic, Daniel Smutek
Computational Elastography from Standard Ultrasound Image Sequences by Global Trust Region Optimization. IPMI (2005)
Jan Kybic, Maureen Clerc, Touffic Abboud, Olivier D. Faugeras, Renaud Keriven, Théodore Papadopoulo
A common formalism for the Integral formulations of the forward EEG problem. IEEE Trans. Medical Imaging 24 (1) (2005)
Leila Muresan, Bettina Heise, Erich-Peter Klement, Jan Kybic
Quantitative analysis of microarray images. ICIP (2) (2005)
María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Sühling, Patrick R. Hunziker, Michael Unser
Spatio-temporal nonrigid registration for ultrasound cardiac motion estimation. IEEE Trans. Medical Imaging 24 (9) (2005)
Jan Kybic
High-dimensional mutual information estimation for image registration. ICIP (2004)
Geoffray Adde, Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo
Symmetric BEM Formulation for the M/EEG Forward Problem. IPMI (2003)
Jan Kybic, Michael Unser
Fast parametric elastic image registration. IEEE Trans. Image Process. 12 (11) (2003)
Jan Kybic, Thierry Blu, Michael Unser
Generalized sampling: a variational approach .II. Applications. IEEE Trans. Signal Process. 50 (8) (2002)
María J. Ledesma-Carbayo, Jan Kybic, Michael Sühling, Patrick R. Hunziker, Manuel Desco, Andrés Santos, Michael Unser
Cardiac ultrasound motion detection by elastic registration exploiting temporal coherence. ISBI (2002)
Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo
The fast multipole method for the direct E/MEG problem. ISBI (2002)
Jan Kybic, Thierry Blu, Michael Unser
Generalized sampling: a variational approach .I. Theory. IEEE Trans. Signal Process. 50 (8) (2002)
María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Unser
Cardiac Motion Analysis from Ultrasound Sequences Using Non-rigid Registration. MICCAI (2001)
Jan Kybic, Thierry Blu, Michael A. Unser
Variational approach to tomographic reconstruction. Medical Imaging: Image Processing (2001)
Jan Kybic, Philippe Thévenaz, Arto Nirkko, Michael Unser
Unwarping of Unidirectionally Distorted EPI Images. IEEE Trans. Medical Imaging 19 (2) (2000)
Jan Kybic, Michael Unser
Multidimensional Elastic Registration of Images Using Splines. ICIP (2000)
Jan Kybic, Philippe Thévenaz, Michael Unser
Compensation of Unidirectional Geometric Distortion in EPI Using Spline Warping. ICIP (2) (1999)
Pavel Sovka, Petr Pollák, Jan Kybic
Extended spectral subtraction. EUSIPCO (1996)