Ipek Oguz

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 82

Top Venues

CoRR

Medical Imaging: Image Processing

ISBI

Medical Image Anal.

Publications

Dewei Hu, Hao Li, Han Liu, Ipek Oguz
Domain generalization for retinal vessel segmentation via Hessian-based vector field. Medical Image Anal. 95 (2024)
Han Liu, Hao Li, Jiacheng Wang, Yubo Fan, Zhoubing Xu, Ipek Oguz
Predicting fluorescent labels in label-free microscopy images with pix2pix and adaptive loss in Light My Cells challenge. CoRR (2024)
Hao Li, Han Liu, Dewei Hu, Jiacheng Wang, Ipek Oguz
PRISM: A Promptable and Robust Interactive Segmentation Model with Visual Prompts. CoRR (2024)
Jiacheng Wang, Hao Li, Dewei Hu, Rui Xu, Xing Yao, Yuankai K. Tao, Ipek Oguz
Retinal IPA: Iterative KeyPoints Alignment for Multimodal Retinal Imaging. CoRR (2024)
Han Liu, Zhoubing Xu, Riqiang Gao, Hao Li, Jianing Wang, Guillaume Chabin, Ipek Oguz, Sasa Grbic
COSST: Multi-Organ Segmentation With Partially Labeled Datasets Using Comprehensive Supervisions and Self-Training. IEEE Trans. Medical Imaging 43 (5) (2024)
Hao Li, Baris U. Oguz, Gabriel Arenas, Xing Yao, Jiacheng Wang, Alison M. Pouch, Brett C. Byram, Nadav Schwartz, Ipek Oguz
Interactive Segmentation Model for Placenta Segmentation from 3D Ultrasound images. CoRR (2024)
Jiacheng Wang, Hao Li, Han Liu, Dewei Hu, Daiwei Lu, Keejin Yoon, Kelsey Barter, Francesca Bagnato, Ipek Oguz
SSL^2: Self-Supervised Learning meets Semi-Supervised Learning: Multiple Sclerosis Segmentation in 7T-MRI from large-scale 3T-MRI. CoRR (2023)
Jiacheng Wang, Kathleen E. Larson, Ipek Oguz
Self-Supervised CSF Inpainting for Improved Accuracy Validation of Cortical Surface Analyses. MIDL (2023)
Xing Yao, Han Liu, Dewei Hu, Daiwei Lu, Ange Lou, Hao Li, Ruining Deng, Gabriel Arenas, Baris U. Oguz, Nadav Schwartz, Brett C. Byram, Ipek Oguz
False Negative/Positive Control for SAM on Noisy Medical Images. CoRR (2023)
Han Liu, Yubo Fan, Zhoubing Xu, Benoit M. Dawant, Ipek Oguz
Learning Site-specific Styles for Multi-institutional Unsupervised Cross-modality Domain Adaptation. CoRR (2023)
Dewei Hu, Xing Yao, Jiacheng Wang, Yuankai K. Tao, Ipek Oguz
Deep angiogram: trivializing retinal vessel segmentation. Medical Imaging: Image Processing (2023)
Huahong Zhang, Hao Li, Kathleen E. Larson, Kilian Hett, Ipek Oguz
Domain generalization for robust MS lesion segmentation. Medical Imaging: Image Processing (2023)
Hao Li, Han Liu, Dewei Hu, Xing Yao, Jiacheng Wang, Ipek Oguz
CATS v2: Hybrid encoders for robust medical segmentation. CoRR (2023)
Dewei Hu, Hao Li, Han Liu, Xing Yao, Jiacheng Wang, Ipek Oguz
MAP: Domain Generalization via Meta-Learning on Anatomy-Consistent Pseudo-Modalities. ISIC/Care-AI/MedAGI/DeCaF@MICCAI (2023)
Han Liu, Hao Li, Xing Yao, Yubo Fan, Dewei Hu, Benoit M. Dawant, Vishwesh Nath, Zhoubing Xu, Ipek Oguz
COLosSAL: A Benchmark for Cold-start Active Learning for 3D Medical Image Segmentation. CoRR (2023)
Jiacheng Wang, Hao Li, Han Liu, Dewei Hu, Daiwei Lu, Keejin Yoon, Kelsey Barter, Francesca Bagnato, Ipek Oguz
SSL2: self-supervised learning meets semi-supervised learning: multiple sclerosis segmentation in 7T-MRI from large-scale 3T-MRI. Medical Imaging: Image Processing (2023)
Reuben Dorent, Aaron Kujawa, Marina Ivory, Spyridon Bakas, Nicola Rieke, Samuel Joutard, Ben Glocker, Jorge Cardoso, Marc Modat, Kayhan Batmanghelich, Arseniy Belkov, Maria G. Baldeon Calisto, Jae Won Choi, Benoit M. Dawant, Hexin Dong, Sergio Escalera, Yubo Fan, Lasse Hansen, Mattias P. Heinrich, Smriti Joshi, Victoriya Kashtanova, Hyeongyu Kim, Satoshi Kondo, Christian N. Kruse, Susana K. Lai-Yuen, Hao Li, Han Liu, Buntheng Ly, Ipek Oguz, Hyungseob Shin, Boris Shirokikh, Zixian Su, Guotai Wang, Jianghao Wu, Yanwu Xu, Kai Yao, Li Zhang, Sébastien Ourselin, Jonathan Shapey, Tom Vercauteren
CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation. Medical Image Anal. 83 (2023)
Jiacheng Wang, Hao Li, Dewei Hu, Yuankai K. Tao, Ipek Oguz
Novel OCT mosaicking pipeline with Feature- and Pixel-based registration. CoRR (2023)
Dewei Hu, Hao Li, Han Liu, Xing Yao, Jiacheng Wang, Ipek Oguz
MAP: Domain Generalization via Meta-Learning on Anatomy-Consistent Pseudo-Modalities. CoRR (2023)
Hao Li, Han Liu, Dewei Hu, Jiacheng Wang, Ipek Oguz
Assessing Test-time Variability for Interactive 3D Medical Image Segmentation with Diverse Point Prompts. CoRR (2023)
Yue Liu, Shunxing Bao, Dario J. Englot, Victoria L. Morgan, Warren D. Taylor, Ying Wei, Ipek Oguz, Bennett A. Landman, Ilwoo Lyu
Hierarchical particle optimization for cortical shape correspondence in temporal lobe resection. Comput. Biol. Medicine 152 (2023)
Dewei Hu, Xing Yao, Jiacheng Wang, Yuankai K. Tao, Ipek Oguz
Deep Angiogram: Trivializing Retinal Vessel Segmentation. CoRR (2023)
Hao Li, Han Liu, Dewei Hu, Jiacheng Wang, Ipek Oguz
Promise: Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models. CoRR (2023)
Dewei Hu, Hao Li, Han Liu, Xing Yao, Jiacheng Wang, Ipek Oguz
VesselMorph: Domain-Generalized Retinal Vessel Segmentation via Shape-Aware Representation. CoRR (2023)
Xing Yao, Ange Lou, Hao Li, Dewei Hu, Daiwei Lu, Han Liu, Jiacheng Wang, Zachary A. Stoebner, Hans J. Johnson, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
Novel application of the attention mechanism on medical image harmonization. Medical Imaging: Image Processing (2023)
Han Liu, Zhoubing Xu, Riqiang Gao, Hao Li, Jianing Wang, Guillaume Chabin, Ipek Oguz, Sasa Grbic
COSST: Multi-organ Segmentation with Partially Labeled Datasets Using Comprehensive Supervisions and Self-training. CoRR (2023)
Han Liu, Hao Li, Xing Yao, Yubo Fan, Dewei Hu, Benoit M. Dawant, Vishwesh Nath, Zhoubing Xu, Ipek Oguz
COLosSAL: A Benchmark for Cold-Start Active Learning for 3D Medical Image Segmentation. MICCAI (2) (2023)
Jiacheng Wang, Kathleen E. Larson, Ipek Oguz
Self-Supervised CSF Inpainting with Synthetic Atrophy for Improved Accuracy Validation of Cortical Surface Analyses. CoRR (2023)
Hao Li, Qibang Zhu, Dewei Hu, Manasvi R. Gunnala, Hans J. Johnson, Omar Sherbini, Francesco Gavazzi, Russell D'Aiello, Adeline Vanderver, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
Human brain extraction with deep learning. Medical Imaging: Image Processing (2022)
Han Liu, Yubo Fan, Hao Li, Jiacheng Wang, Dewei Hu, Can Cui, Ho Hin Lee, Ipek Oguz
ModDrop++: A Dynamic Filter Network with Intra-subject Co-training for Multiple Sclerosis Lesion Segmentation with Missing Modalities. CoRR (2022)
Reuben Dorent, Aaron Kujawa, Marina Ivory, Spyridon Bakas, Nicola Rieke, Samuel Joutard, Ben Glocker, Jorge Cardoso, Marc Modat, Kayhan Batmanghelich, Arseniy Belkov, Maria G. Baldeon Calisto, Jae Won Choi, Benoit M. Dawant, Hexin Dong, Sergio Escalera, Yubo Fan, Lasse Hansen, Mattias P. Heinrich, Smriti Joshi, Victoriya Kashtanova, Hyeongyu Kim, Satoshi Kondo, Christian N. Kruse, Susana K. Lai-Yuen, Hao Li, Han Liu, Buntheng Ly, Ipek Oguz, Hyungseob Shin, Boris Shirokikh, Zixian Su, Guotai Wang, Jianghao Wu, Yanwu Xu, Kai Yao, Li Zhang, Sébastien Ourselin, Jonathan Shapey, Tom Vercauteren
CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwnannoma and Cochlea Segmentation. CoRR (2022)
Qibang Zhu, Hao Li, Nathan D. Cass, Nathan R. Lindquist, Kareem O. Tawfik, Ipek Oguz
Acoustic neuroma segmentation using ensembled convolutional neural networks. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2022)
Dewei Hu, Hao Li, Han Liu, Ipek Oguz
Domain Generalization for Retinal Vessel Segmentation with Vector Field Transformer. MIDL (2022)
Dewei Hu, Yuankai K. Tao, Ipek Oguz
Unsupervised denoising of retinal OCT with diffusion probabilistic model. Medical Imaging: Image Processing (2022)
Hao Li, Dewei Hu, Han Liu, Jiacheng Wang, Ipek Oguz
Cats: Complementary CNN and Transformer Encoders for Segmentation. CoRR (2022)
Zachary A. Stoebner, Daiwei Lu, Seok Hee Hong, Nicholas L. Kavoussi, Ipek Oguz
Segmentation of kidney stones in endoscopic video feeds. CoRR (2022)
Hao Li, Han Liu, Dewei Hu, Jiacheng Wang, Hans J. Johnson, Omar Sherbini, Francesco Gavazzi, Russell D'Aiello, Adeline Vanderver, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
Self-supervised Test-Time Adaptation for Medical Image Segmentation. MLCN@MICCAI (2022)
Han Liu, Yubo Fan, Ipek Oguz, Benoit M. Dawant
Enhancing Data Diversity for Self-training Based Unsupervised Cross-Modality Vestibular Schwannoma and Cochlea Segmentation. BrainLes@MICCAI (2) (2022)
Dewei Hu, Yuankai K. Tao, Ipek Oguz
Unsupervised Denoising of Retinal OCT with Diffusion Probabilistic Model. CoRR (2022)
Han Liu, Yubo Fan, Hao Li, Jiacheng Wang, Dewei Hu, Can Cui, Ho Hin Lee, Huahong Zhang, Ipek Oguz
ModDrop++: A Dynamic Filter Network with Intra-subject Co-training for Multiple Sclerosis Lesion Segmentation with Missing Modalities. MICCAI (5) (2022)
Hao Li, Dewei Hu, Han Liu, Jiacheng Wang, Ipek Oguz
Cats: Complementary CNN and Transformer Encoders for Segmentation. ISBI (2022)
Zachary A. Stoebner, Daiwei Lu, Seok Hee Hong, Nicholas L. Kavoussi, Ipek Oguz
Segmentation of kidney stones in endoscopic video feeds. Medical Imaging: Image Processing (2022)
Hao Li, Dewei Hu, Qibang Zhu, Kathleen E. Larson, Huahong Zhang, Ipek Oguz
Unsupervised Cross-modality Domain Adaptation for Segmenting Vestibular Schwannoma and Cochlea with Data Augmentation and Model Ensemble. BrainLes@MICCAI (2) (2021)
Yue Liu, Dario J. Englot, Victoria L. Morgan, Warren D. Taylor, Ying Wei, Ipek Oguz, Bennett A. Landman, Ilwoo Lyu
Establishing surface correspondence for post-surgical cortical thickness changes in temporal lobe epilepsy. Medical Imaging: Image Processing (2021)
Dewei Hu, Joseph D. Malone, Yigit Atay, Yuankai K. Tao, Ipek Oguz
Retinal OCT Denoising with Pseudo-Multimodal Fusion Network. CoRR (2021)
Hao Li, Huahong Zhang, Hans J. Johnson, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
MRI subcortical segmentation in neurodegeneration with cascaded 3D CNNs. Medical Imaging: Image Processing (2021)
Dewei Hu, Can Cui, Hao Li, Kathleen E. Larson, Yuankai K. Tao, Ipek Oguz
LIFE: A Generalizable Autodidactic Pipeline for 3D OCT-A Vessel Segmentation. CoRR (2021)
Hao Li, Dewei Hu, Qibang Zhu, Kathleen E. Larson, Huahong Zhang, Ipek Oguz
Unsupervised Cross-Modality Domain Adaptation for Segmenting Vestibular Schwannoma and Cochlea with Data Augmentation and Model Ensemble. CoRR (2021)
Kilian Hett, Vinh-Thong Ta, Ipek Oguz, José V. Manjón, Pierrick Coupé
Multi-scale graph-based grading for Alzheimer's disease prediction. Medical Image Anal. 67 (2021)
Kathleen E. Larson, Ipek Oguz
Synthetic atrophy for longitudinal surface-based cortical thickness measurement. Medical Imaging: Image Processing (2021)
Hao Li, Huahong Zhang, Hans J. Johnson, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
Longitudinal subcortical segmentation with deep learning. Medical Imaging: Image Processing (2021)
Dewei Hu, Can Cui, Hao Li, Kathleen E. Larson, Yuankai K. Tao, Ipek Oguz
LIFE: A Generalizable Autodidactic Pipeline for 3D OCT-A Vessel Segmentation. MICCAI (1) (2021)
Ipek Oguz, Joseph D. Malone, Yigit Atay, Yuankai K. Tao
Self-fusion for OCT noise reduction. Medical Imaging: Image Processing (2020)
Kathryn Ufford, Simon Vandekar, Ipek Oguz
Joint intensity fusion with normalized cross-correlation metric for cross-modality MRI synthesis (Conference Presentation). Medical Imaging: Image Processing (2020)
Alison M. Pouch, Paul A. Yushkevich, Abdullah H. Aly, Alexander H. F. Woltersom, Edidiong Okon, Ahmed H. Aly, Natalie Yushkevich, Shobhana Parameshwaran, Jiancong Wang, Baris U. Oguz, James C. Gee, Ipek Oguz, Nadav Schwartz
Automated Meshing of Anatomical Shapes for Deformable Medial Modeling: Application to the Placenta in 3D Ultrasound. ISBI (2020)
Kilian Hett, Rémi Giraud, Hans J. Johnson, Jane S. Paulsen, Jeffrey D. Long, Ipek Oguz
Patch-Based Abnormality Maps for Improved Deep Learning-Based Classification of Huntington's Disease. MICCAI (7) (2020)
Hao Li, Huahong Zhang, Dewei Hu, Hans J. Johnson, Jeffrey D. Long, Jane S. Paulsen, Ipek Oguz
Generalizing MRI Subcortical Segmentation to Neurodegeneration. MLCN/RNO-AI@MICCAI (2020)
Kilian Hett, Hans J. Johnson, Pierrick Coupé, Jane S. Paulsen, Jeffrey D. Long, Ipek Oguz
Tensor-Based Grading: A Novel Patch-Based Grading Approach for the Analysis of Deformation Fields in Huntington's Disease. CoRR (2020)
Kilian Hett, Hans J. Johnson, Pierrick Coupé, Jane S. Paulsen, Jeffrey D. Long, Ipek Oguz
Tensor-Based Grading: A Novel Patch-Based Grading Approach for the Analysis Of Deformation Fields in Huntington's Disease. ISBI (2020)
Dewei Hu, Joseph D. Malone, Yigit Atay, Yuankai K. Tao, Ipek Oguz
Retinal OCT Denoising with Pseudo-Multimodal Fusion Network. OMIA@MICCAI (2020)
Huahong Zhang, Ipek Oguz
Multiple Sclerosis Lesion Segmentation - A Survey of Supervised CNN-Based Methods. BrainLes@MICCAI (1) (2020)
Huahong Zhang, Rohit Bakshi, Francesca Bagnato, Ipek Oguz
Robust Multiple Sclerosis Lesion Inpainting with Edge Prior. MLMI@MICCAI (2020)
Huahong Zhang, Ipek Oguz
Multiple Sclerosis Lesion Segmentation - A Survey of Supervised CNN-Based Methods. CoRR (2020)
M. Jorge Cardoso, Aasa Feragen, Ben Glocker, Ender Konukoglu, Ipek Oguz, Gozde B. Unal, Tom Vercauteren
Medical Imaging with Deep Learning: MIDL 2019 - Extended Abstract Track. CoRR (2019)
Satyananda Kashyap, Ipek Oguz, Honghai Zhang, Milan Sonka
Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative. CoRR (2019)
Paul A. Yushkevich, Artem Pashchinskiy, Ipek Oguz, Suyash Mohan, J. Eric Schmitt, Joel M. Stein, Dzenan Zukic, Jared Vicory, Matthew McCormick, Natalie Yushkevich, Nadav Schwartz, Yang Gao, Guido Gerig
User-Guided Segmentation of Multi-modality Medical Imaging Datasets with ITK-SNAP. Neuroinformatics 17 (1) (2019)
Huahong Zhang, Alessandra M. Valcarcel, Rohit Bakshi, Renxin Chu, Francesca Bagnato, Russell T. Shinohara, Kilian Hett, Ipek Oguz
Multiple Sclerosis Lesion Segmentation with Tiramisu and 2.5D Stacked Slices. MICCAI (3) (2019)
Baris U. Oguz, Jiancong Wang, Natalie Yushkevich, Alison M. Pouch, James C. Gee, Paul A. Yushkevich, Nadav Schwartz, Ipek Oguz
Combining Deep Learning and Multi-atlas Label Fusion for Automated Placenta Segmentation from 3DUS. DATRA/PIPPI@MICCAI (2018)
Greg M. Fleishman, Alessandra Valcarcel, Dzung L. Pham, Snehashis Roy, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Ipek Oguz
Joint Intensity Fusion Image Synthesis Applied to Multiple Sclerosis Lesion Segmentation. BrainLes@MICCAI (2017)
Ipek Oguz, Aaron Carass, Dzung L. Pham, Snehashis Roy, Nagesh Subbana, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Jerry L. Prince
Dice Overlap Measures for Objects of Unknown Number: Application to Lesion Segmentation. BrainLes@MICCAI (2017)
Min Chen, Jiancong Wang, Ipek Oguz, Brian L. Vanderbeek, James C. Gee
Automated Segmentation of the Choroid in EDI-OCT Images with Retinal Pathology Using Convolution Neural Networks. FIFI/OMIA@MICCAI (2017)
Hossam N. Isack, Olga Veksler, Ipek Oguz, Milan Sonka, Yuri Boykov
Efficient Optimization for Hierarchically-Structured Interacting Segments (HINTS). CVPR (2017)
Baris U. Oguz, Russell T. Shinohara, Paul A. Yushkevich, Ipek Oguz
Gradient Boosted Trees for Corrective Learning. MLMI@MICCAI (2017)
Hossam N. Isack, Olga Veksler, Ipek Oguz, Milan Sonka, Yuri Boykov
Efficient optimization for Hierarchically-structured Interacting Segments (HINTS). CoRR (2017)
Zhihui Guo, Satyananda Kashyap, Milan Sonka, Ipek Oguz
Machine learning in a graph framework for subcortical segmentation. Medical Imaging: Image Processing (2017)
Mengjin Dong, Ipek Oguz, Nagesh Subbana, Peter A. Calabresi, Russell T. Shinohara, Paul A. Yushkevich
Multiple Sclerosis Lesion Segmentation Using Joint Label Fusion. Patch-MI@MICCAI (2017)
Satyananda Kashyap, Ipek Oguz, Milan Sonka
Statistical shape analysis of automatically segmented femur bones: Data from the osteoarthritis initiative. ISBI (2016)
Ipek Oguz, Satyananda Kashyap, Hongzhi Wang, Paul A. Yushkevich, Milan Sonka
Globally Optimal Label Fusion with Shape Priors. MICCAI (2) (2016)
Ipek Oguz, Li Zhang, Michael D. Abràmoff, Milan Sonka
Optimal retinal cyst segmentation from OCT images. Medical Imaging: Image Processing (2016)
Satyananda Kashyap, Ipek Oguz, Honghai Zhang, Milan Sonka
Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative. MICCAI (2) (2016)
Joohwi Lee, Sun Hyung Kim, Ipek Oguz, Martin Styner
Enhanced cortical thickness measurements for rodent brains via Lagrangian-based RK4 streamline computation. Medical Imaging: Image Processing (2016)
Ipek Oguz, Joshua E. Cates, Manasi Datar, Beatriz Paniagua, P. Thomas Fletcher, Clement Vachet, Martin Styner, Ross T. Whitaker
Entropy-based particle correspondence for shape populations. Int. J. Comput. Assist. Radiol. Surg. 11 (7) (2016)
Ipek Oguz, Martin Styner, Mar Sanchez, Yundi Shi, Milan Sonka
LOGISMOS-B for primates: primate cortical surface reconstruction and thickness measurement. Medical Imaging: Image Processing (2015)
Ipek Oguz, Milan Sonka
Robust Cortical Thickness Measurement with LOGISMOS-B. MICCAI (1) (2014)
Ipek Oguz, Milan Sonka
LOGISMOS-B: Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces for the Brain. IEEE Trans. Medical Imaging 33 (6) (2014)
Sean Skwerer, Elizabeth Bullitt, Stephan Huckemann, Ezra Miller, Ipek Oguz, Megan Owen, Vic Patrangenaru, J. Scott Provan, J. S. Marron
Tree-Oriented Analysis of Brain Artery Structure. J. Math. Imaging Vis. 50 (1-2) (2014)
Ipek Oguz, Mahshid Farzinfar, Joy T. Matsui, François Budin, Zhexing Liu, Guido Gerig, Hans J. Johnson, Martin Andreas Styner
DTIPrep: quality control of diffusion-weighted images. Frontiers Neuroinformatics 8 (2014)
François Budin, Marion Hoogstoel, Patrick Reynolds, Michael Grauer, Shonagh K. O'Leary-Moore, Ipek Oguz
Fully automated rodent brain MR image processing pipeline on a Midas server: from acquired images to region-based statistics. Frontiers Neuroinformatics 7 (2013)
Mahshid Farzinfar, Ipek Oguz, Rachel Gimpel Smith, Audrey R. Verde, Cheryl Dietrich, Aditya Gupta, Maria L. Escolar, Joseph Piven, Sonia Pujol, Clement Vachet, Sylvain Gouttard, Guido Gerig, Stephen Dager, Robert C. McKinstry, Sarah Paterson, Alan C. Evans, Martin Andreas Styner
Diffusion imaging quality control via entropy of principal direction distribution. NeuroImage 82 (2013)
Michael Grauer, Patrick Reynolds, Marion Hoogstoel, François Budin, Martin Andreas Styner, Ipek Oguz
A midas plugin to enable construction of reproducible web-based image processing pipelines. Frontiers Neuroinformatics 7 (2013)
Joohwi Lee, Ilwoo Lyu, Ipek Oguz, Martin Andreas Styner
Particle-Guided Image Registration. MICCAI (3) (2013)
Mahshid Farzinfar, Yin Li, Audrey R. Verde, Ipek Oguz, Guido Gerig, Martin A. Styner
DTI quality control assessment via error estimation from Monte Carlo simulations. Medical Imaging: Image Processing (2013)
Beatriz Paniagua, Abeer Alhadidi, Lucia H. S. Cevidanes, Martin Styner, Ipek Oguz
Mandibular asymmetry characterization using generalized tensor-based morphometry. ISBI (2011)
Joohwi Lee, Cindy Ehlers, Fulton Crews, Marc Niethammer, François Budin, Beatriz Paniagua, Kathy Sulik, Josephine Johns, Martin Styner, Ipek Oguz
Automatic cortical thickness analysis on rodent brain. Medical Imaging: Image Processing (2011)
Alexis Boucharin, Ipek Oguz, Clement Vachet, Yundi Shi, Mar Sanchez, Martin Styner
Efficient, graph-based white matter connectivity from orientation distribution functions via multi-directional graph propagation. Medical Imaging: Image Processing (2011)
Clement Vachet, Heather Cody Hazlett, Marc Niethammer, Ipek Oguz, Joshua E. Cates, Ross T. Whitaker, Joseph Piven, Martin Styner
Group-wise automatic mesh-based analysis of cortical thickness. Medical Imaging: Image Processing (2011)
Ipek Oguz, Joohwi Lee, François Budin, Ashley Rumple, Matthew McMurray, Cindy Ehlers, Fulton Crews, Josephine Johns, Martin Styner
Automatic skull-stripping of rat MRI/DTI scans and atlas building. Medical Imaging: Image Processing (2011)
Xiaoxiao Liu, Ipek Oguz, Stephen M. Pizer, Gig S. Mageras
Shape-correlated deformation statistics for respiratory motion prediction in 4D lung. Medical Imaging: Image-Guided Procedures (2010)
Ipek Oguz, Marc Niethammer, Joshua E. Cates, Ross T. Whitaker, P. Thomas Fletcher, Clement Vachet, Martin Styner
Cortical Correspondence with Probabilistic Fiber Connectivity. IPMI (2009)
Martin Styner, Ipek Oguz, Tobias Heimann, Guido Gerig
Minimum description length with local geometry. ISBI (2008)

Ipek Oguz.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Ipek Oguz