José V. Manjón

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 42

Top Topics

Multiple Sclerosis

Top Venues

Patch-MI@MICCAI

Medical Image Anal.

Publications

Marina Ruiz-Perez, Sergio Morell-Ortega, Marien Gadea, Roberto Vivó Hernando, Gregorio Rubio, Fernando Aparici-Robles, María de la Iglesia-Vayá, Thomas Tourdias, Pierrick Coupé, José V. Manjón
DeepThalamus: A novel deep learning method for automatic segmentation of brain thalamic nuclei from multimodal ultra-high resolution MRI. CoRR (2024)
Sergio Morell-Ortega, Marina Ruiz-Perez, Marien Gadea, Roberto Vivó Hernando, Gregorio Rubio, Fernando Aparici-Robles, María de la Iglesia-Vayá, Gwenaelle Catheline, Pierrick Coupé, José V. Manjón
DeepCERES: A Deep learning method for cerebellar lobule segmentation using ultra-high resolution multimodal MRI. CoRR (2024)
José V. Manjón, José E. Romero, Roberto Vivó Hernando, Gregorio Rubio, Fernando Aparici-Robles, María de la Iglesia-Vayá, Pierrick Coupé
vol2Brain: A New Online Pipeline for Whole Brain MRI Analysis. Frontiers Neuroinformatics 16 (2022)
Reda Abdellah Kamraoui, Boris Mansencal, José V. Manjón, Pierrick Coupé
Longitudinal detection of new MS lesions using Deep Learning. CoRR (2022)
Reda Abdellah Kamraoui, Vinh-Thong Ta, Thomas Tourdias, Boris Mansencal, José V. Manjón, Pierrick Coupé
DeepLesionBrain: Towards a broader deep-learning generalization for multiple sclerosis lesion segmentation. Medical Image Anal. 76 (2022)
Kilian Hett, Vinh-Thong Ta, Ipek Oguz, José V. Manjón, Pierrick Coupé
Multi-scale graph-based grading for Alzheimer's disease prediction. Medical Image Anal. 67 (2021)
Reda Abdellah Kamraoui, Vinh-Thong Ta, Nicolas Papadakis, Fanny Compaire, José V. Manjón, Pierrick Coupé
POPCORN: Progressive Pseudo-labeling with Consistency Regularization and Neighboring. CoRR (2021)
Reda Abdellah Kamraoui, Vinh-Thong Ta, Nicolas Papadakis, Fanny Compaire, José V. Manjón, Pierrick Coupé
POPCORN: Progressive Pseudo-Labeling with Consistency Regularization and Neighboring. MICCAI (2) (2021)
José V. Manjón, José E. Romero, Roberto Vivó Hernando, Gregorio Rubio, Fernando Aparici, María de la Iglesia-Vayá, Thomas Tourdias, Pierrick Coupé
Blind MRI Brain Lesion Inpainting Using Deep Learning. SASHIMI@MICCAI (2020)
Reda Abdellah Kamraoui, Vinh-Thong Ta, Thomas Tourdias, Boris Mansencal, José V. Manjón, Pierrick Coupé
Towards broader generalization of deep learning methods for multiple sclerosis lesion segmentation. CoRR (2020)
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V. Manjón
AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. NeuroImage 219 (2020)
Baudouin Denis de Senneville, José V. Manjón, Pierrick Coupé
RegQCNET: Deep Quality Control for Image-to-template Brain MRI Registration. CoRR (2020)
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V. Manjón
AssemblyNet: A Novel Deep Decision-Making Process for Whole Brain MRI Segmentation. CoRR (2019)
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V. Manjón
AssemblyNet: A large ensemble of CNNs for 3D Whole Brain MRI Segmentation. CoRR (2019)
Kilian Hett, Vinh-Thong Ta, José V. Manjón, Pierrick Coupé
Multi-scale Graph-based Grading for Alzheimer's Disease Prediction. CoRR (2019)
Rémi Giraud, Vinh-Thong Ta, Nicolas Papadakis, José V. Manjón, D. Louis Collins, Pierrick Coupé, Alzheimer's Disease Neuroimaging Initiative
An Optimized PatchMatch for Multi-scale and Multi-feature Label Fusion. CoRR (2019)
José V. Manjón, Pierrick Coupé
MRI denoising using Deep Learning and Non-local averaging. CoRR (2019)
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V. Manjón
AssemblyNet: A Novel Deep Decision-Making Process for Whole Brain MRI Segmentation. MICCAI (3) (2019)
Pierrick Coupé, Thomas Tourdias, Pierre Linck, José E. Romero, José V. Manjón
LesionBrain: An Online Tool for White Matter Lesion Segmentation. Patch-MI@MICCAI (2018)
José E. Romero, Pierrick Coupé, José V. Manjón
Corrigendum to "HIPS: A new hippocampus subfield segmentation method" [NeuroImage 163 (2017) 286-295]. NeuroImage 172 (2018)
Lee B. Reid, Ashley Gillman, Alex M. Pagnozzi, José V. Manjón, Jurgen Fripp
MRI Denoising and Artefact Removal Using Self-Organizing Maps for Fast Global Block-Matching. Patch-MI@MICCAI (2018)
José V. Manjón, Pierrick Coupé
MRI Denoising Using Deep Learning. Patch-MI@MICCAI (2018)
Kilian Hett, Vinh-Thong Ta, José V. Manjón, Pierrick Coupé
Graph of Hippocampal Subfields Grading for Alzheimer's Disease Prediction. MLMI@MICCAI (2018)
Kilian Hett, Vinh-Thong Ta, José V. Manjón, Pierrick Coupé, Alzheimer's Disease Neuroimaging Initiative
Adaptive fusion of texture-based grading for Alzheimer's disease classification. Comput. Medical Imaging Graph. 70 (2018)
José V. Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Patricia M. Desmond, Jurgen Fripp, Olivier Salvado
MRI white matter lesion segmentation using an ensemble of neural networks and overcomplete patch-based voting. Comput. Medical Imaging Graph. 69 (2018)
Kilian Hett, Vinh-Thong Ta, José V. Manjón, Pierrick Coupé
Graph of Brain Structures Grading for Early Detection of Alzheimer's Disease. MICCAI (3) (2018)
Aaron Carass, Jennifer L. Cuzzocreo, Shuo Han, Carlos R. Hernandez-Castillo, Paul E. Rasser, Melanie Ganz, Vincent Beliveau, Jose Dolz, Ismail Ben Ayed, Christian Desrosiers, Benjamin Thyreau, José E. Romero, Pierrick Coupé, José V. Manjón, Vladimir S. Fonov, D. Louis Collins, Sarah H. Ying, Chiadi U. Onyike, Jerry L. Prince
Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images. NeuroImage 183 (2018)
Kilian Hett, Vinh-Thong Ta, José V. Manjón, Pierrick Coupé
Adaptive Fusion of Texture-Based Grading: Application to Alzheimer's Disease Detection. Patch-MI@MICCAI (2017)
Long Xie, John Pluta, Sandhitsu R. Das, Laura E. M. Wisse, Hongzhi Wang, Lauren Mancuso, Dasha Kliot, Brian B. Avants, Song-Lin Ding, José V. Manjón, David A. Wolk, Paul A. Yushkevich
Multi-template analysis of human perirhinal cortex in brain MRI: Explicitly accounting for anatomical variability. NeuroImage 144 (2017)
Gerard Sanroma, Víctor Andrea, Oualid M. Benkarim, José V. Manjón, Pierrick Coupé, Oscar Camara, Gemma Piella, Miguel Ángel González Ballester
Early Prediction of Alzheimer's Disease with Non-local Patch-Based Longitudinal Descriptors. Patch-MI@MICCAI (2017)
José E. Romero, Pierrick Coupé, Rémi Giraud, Vinh-Thong Ta, Vladimir S. Fonov, Min Tae M. Park, M. Mallar Chakravarty, Aristotle N. Voineskos, José V. Manjón
CERES: A new cerebellum lobule segmentation method. NeuroImage 147 (2017)
José E. Romero, Pierrick Coupé, José V. Manjón
HIPS: A new hippocampus subfield segmentation method. NeuroImage 163 (2017)
Ying Xia, José V. Manjón, Craig Engstrom, Stuart Crozier, Olivier Salvado, Jurgen Fripp
Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks. ISBI (2017)
José V. Manjón, Pierrick Coupé
Hippocampus Subfield Segmentation Using a Patch-Based Boosted Ensemble of Autocontext Neural Networks. Patch-MI@MICCAI (2017)
José V. Manjón, Pierrick Coupé
volBrain: An Online MRI Brain Volumetry System. Frontiers Neuroinformatics 10 (2016)
Erhard T. Næss-Schmidt, Anna Tietze, Jakob Udby Blicher, Mikkel Petersen, Irene K. Mikkelsen, Pierrick Coupé, José V. Manjón, Simon F. Eskildsen
Automatic thalamus and hippocampus segmentation from MP2RAGE: comparison of publicly available methods and implications for DTI quantification. Int. J. Comput. Assist. Radiol. Surg. 11 (11) (2016)
Long Xie, Laura E. M. Wisse, Sandhitsu R. Das, Hongzhi Wang, David A. Wolk, José V. Manjón, Paul A. Yushkevich
Accounting for the Confound of Meninges in Segmenting Entorhinal and Perirhinal Cortices in T1-Weighted MRI. MICCAI (2) (2016)
José E. Romero, Pierrick Coupé, José V. Manjón
Non-local MRI Library-Based Super-Resolution: Application to Hippocampus Subfield Segmentation. Patch-MI@MICCAI (2016)
Kilian Hett, Vinh-Thong Ta, Rémi Giraud, Mary Mondino, José V. Manjón, Pierrick Coupé
Patch-Based DTI Grading: Application to Alzheimer's Disease Classification. Patch-MI@MICCAI (2016)
José V. Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Jurgen Fripp, Olivier Salvado
HIST: HyperIntensity Segmentation Tool. Patch-MI@MICCAI (2016)
José E. Romero, Pierrick Coupé, José V. Manjón
High Resolution Hippocampus Subfield Segmentation Using Multispectral Multiatlas Patch-Based Label Fusion. Patch-MI@MICCAI (2016)
Rémi Giraud, Vinh-Thong Ta, Nicolas Papadakis, José V. Manjón, D. Louis Collins, Pierrick Coupé
An Optimized PatchMatch for multi-scale and multi-feature label fusion. NeuroImage 124 (2016)
José V. Manjón, Pierrick Coupé, Antonio Buades
MRI noise estimation and denoising using non-local PCA. Medical Image Anal. 22 (1) (2015)
Erhard T. Næss-Schmidt, Anna Tietze, Irene K. Mikkelsen, Mikkel Petersen, Jakob Udby Blicher, Pierrick Coupé, José V. Manjón, Simon F. Eskildsen
Patch-Based Segmentation from MP2RAGE Images: Comparison to Conventional Techniques. Patch-MI@MICCAI (2015)
José V. Manjón, Simon F. Eskildsen, Pierrick Coupé, José E. Romero, D. Louis Collins, Montserrat Robles
Nonlocal Intracranial Cavity Extraction. Int. J. Biomed. Imaging 2014 (2014)
Pierrick Coupé, José V. Manjón, Maxime Chamberland, Maxime Descoteaux, Bassem Hiba
Collaborative patch-based super-resolution for diffusion-weighted images. NeuroImage 83 (2013)
Pierrick Coupé, Martin Munz, José V. Manjón, Edward S. Ruthazer, D. Louis Collins
A CANDLE for a deeper in vivo insight. Medical Image Anal. 16 (4) (2012)
José V. Manjón, Pierrick Coupé, Antonio Buades, D. Louis Collins, Montserrat Robles
New methods for MRI denoising based on sparseness and self-similarity. Medical Image Anal. 16 (1) (2012)
Pierrick Coupé, Simon F. Eskildsen, José V. Manjón, Vladimir S. Fonov, D. Louis Collins
Simultaneous segmentation and grading of anatomical structures for patient's classification: Application to Alzheimer's disease. NeuroImage 59 (4) (2012)
Simon F. Eskildsen, Pierrick Coupé, Vladimir S. Fonov, José V. Manjón, Kelvin K. Leung, Nicolas Guizard, Shafik N. Wassef, Lasse Riis Østergaard, D. Louis Collins
BEaST: Brain extraction based on nonlocal segmentation technique. NeuroImage 59 (3) (2012)
Pierrick Coupé, José V. Manjón, Vladimir S. Fonov, Jens C. Pruessner, Montserrat Robles, D. Louis Collins
Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation. NeuroImage 54 (2) (2011)
Pierrick Coupé, Simon F. Eskildsen, José V. Manjón, Vladimir S. Fonov, D. Louis Collins
Simultaneous Segmentation and Grading of Hippocampus for Patient Classification with Alzheimer's Disease. MICCAI (3) (2011)
José V. Manjón, Pierrick Coupé, Antonio Buades, D. Louis Collins, Montserrat Robles
MRI Superresolution Using Self-Similarity and Image Priors. Int. J. Biomed. Imaging 2010 (2010)
José V. Manjón, Pierrick Coupé, Antonio Buades, Vladimir S. Fonov, D. Louis Collins, Montserrat Robles
Non-local MRI upsampling. Medical Image Anal. 14 (6) (2010)
Pierrick Coupé, José V. Manjón, Vladimir S. Fonov, Jens C. Pruessner, Montserrat Robles, D. Louis Collins
Nonlocal Patch-Based Label Fusion for Hippocampus Segmentation. MICCAI (3) (2010)
Pierrick Coupé, José V. Manjón, Elias Gedamu, Douglas L. Arnold, Montserrat Robles, D. Louis Collins
Robust Rician noise estimation for MR images. Medical Image Anal. 14 (4) (2010)
José V. Manjón, Jussi Tohka, Montserrat Robles
Improved estimates of partial volume coefficients from noisy brain MRI using spatial context. NeuroImage 53 (2) (2010)
Pierrick Coupé, José V. Manjón, Elias Gedamu, Douglas L. Arnold, Montserrat Robles, D. Louis Collins
An Object-Based Method for Rician Noise Estimation in MR Images. MICCAI (1) (2009)
José V. Manjón, Neil A. Thacker, Juan José Lull, Gracián García-Martí, Luis Martí-Bonmatí, Montserrat Robles
Multicomponent MR Image Denoising. Int. J. Biomed. Imaging 2009 (2009)
José V. Manjón, José Carbonell-Caballero, Juan José Lull, Gracián García-Martí, Luis Martí-Bonmatí, Montserrat Robles
MRI denoising using Non-Local Means. Medical Image Anal. 12 (4) (2008)
José V. Manjón, Juan José Lull, José Carbonell-Caballero, Gracián García-Martí, Luis Martí-Bonmatí, Montserrat Robles
A nonparametric MRI inhomogeneity correction method. Medical Image Anal. 11 (4) (2007)