Oualid M. Benkarim

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 23

Top Topics

Segmentation Method

Weighted Voting

Mri Segmentation

Top Venues

Medical Image Anal.

Patch-MI@MICCAI

Publications

Bo-yong Park, Oualid M. Benkarim, Clara F. Weber, Valeria Kebets, Serena Fett, Seulki Yoo, Adriana Di Martino, Michael P. Milham, Bratislav Misic, Sofie L. Valk, Seok-Jun Hong, Boris C. Bernhardt
Connectome-wide structure-function coupling models implicate polysynaptic alterations in autism. NeuroImage 285 (2024)
Andrea Urru, Ayako Nakaki, Oualid M. Benkarim, Francesca Crovetto, Laura Segalés, Valentin Comte, Nadine Hahner, Elisenda Eixarch, Eduard Gratacós, Fátima Crispi, Gemma Piella, Miguel Ángel González Ballester
An automatic pipeline for atlas-based fetal and neonatal brain segmentation and analysis. Comput. Methods Programs Biomed. 230 (2023)
Sara Larivière, Seyma Bayrak, Reinder Vos de Wael, Oualid M. Benkarim, Peer Herholz, Raúl Rodríguez-Cruces, Casey Paquola, Seok-Jun Hong, Bratislav Misic, Alan C. Evans, Sofie L. Valk, Boris C. Bernhardt
BrainStat: A toolbox for brain-wide statistics and multimodal feature associations. NeuroImage 266 (2023)
Raúl Rodríguez-Cruces, Jessica Royer, Peer Herholz, Sara Larivière, Reinder Vos de Wael, Casey Paquola, Oualid M. Benkarim, Bo-yong Park, Janie Degré-Pelletier, Mark C. Nelson, Jordan DeKraker, Ilana R. Leppert, Christine L. Tardif, Jean-Baptiste Poline, Luis Concha, Boris C. Bernhardt
Micapipe: A pipeline for multimodal neuroimaging and connectome analysis. NeuroImage 263 (2022)
Andrea Urru, Ayako Nakaki, Oualid M. Benkarim, Francesca Crovetto, Laura Segales, Valentin Comte, Nadine Hahner, Elisenda Eixarch, Eduard Gratacós, Fátima Crispi, Gemma Piella, Miguel Ángel González Ballester
An automatic pipeline for atlas-based fetal and neonatal brain segmentation and analysis. CoRR (2022)
Oualid M. Benkarim, Casey Paquola, Bo-yong Park, Jessica Royer, Raúl Rodríguez-Cruces, Reinder Vos de Wael, Bratislav Misic, Gemma Piella, Boris C. Bernhardt
A Riemannian approach to predicting brain function from the structural connectome. NeuroImage 257 (2022)
Bo-yong Park, Reinder Vos de Wael, Casey Paquola, Sara Larivière, Oualid M. Benkarim, Jessica Royer, Shahin Tavakol, Raúl Rodríguez-Cruces, Qiongling Li, Sofie L. Valk, Daniel S. Margulies, Bratislav Misic, Danilo Bzdok, Jonathan Smallwood, Boris C. Bernhardt
Signal diffusion along connectome gradients and inter-hub routing differentially contribute to dynamic human brain function. NeuroImage 224 (2021)
Brontë Mckeown, Will H. Strawson, Hao-Ting Wang, Theodoros Karapanagiotidis, Reinder Vos de Wael, Oualid M. Benkarim, Adam Turnbull, Daniel S. Margulies, Elizabeth Jefferies, Cade McCall, Boris C. Bernhardt, Jonathan Smallwood
The relationship between individual variation in macroscale functional gradients and distinct aspects of ongoing thought. NeuroImage 220 (2020)
Jessica Royer, Casey Paquola, Sara Larivière, Reinder Vos de Wael, Shahin Tavakol, Alexander J. Lowe, Oualid M. Benkarim, Alan C. Evans, Danilo Bzdok, Jonathan Smallwood, Birgit Frauscher, Boris C. Bernhardt
Myeloarchitecture gradients in the human insula: Histological underpinnings and association to intrinsic functional connectivity. NeuroImage 216 (2020)
Gabriel Bernardino, Oualid M. Benkarim, María Sanz-de la Garza, Susanna Prat-Gonzàlez, Álvaro Sepúlveda-Martínez, Fátima Crispi, Marta Sitges, Constantine Butakoff, Mathieu De Craene, Bart H. Bijnens, Miguel Ángel González Ballester
Handling confounding variables in statistical shape analysis - application to cardiac remodelling. Medical Image Anal. 65 (2020)
Oualid M. Benkarim, Gemma Piella, Islem Rekik, Nadine Hahner, Elisenda Eixarch, Dinggang Shen, Gang Li, Miguel Ángel González Ballester, Gerard Sanroma
A novel approach to multiple anatomical shape analysis: Application to fetal ventriculomegaly. Medical Image Anal. 64 (2020)
Gabriel Bernardino, Oualid M. Benkarim, María Sanz-de la Garza, Susanna Prat-Gonzàlez, Álvaro Sepúlveda-Martínez, Fátima Crispi, Marta Sitges, Mathieu De Craene, Bart H. Bijnens, Miguel Ángel González Ballester
Handling confounding variables in statistical shape analysis - application to cardiac remodelling. CoRR (2020)
Li Wang, Dong Nie, Guannan Li, Élodie Puybareau, Jose Dolz, Qian Zhang, Fan Wang, Jing Xia, Zhengwang Wu, Jiawei Chen, Kim-Han Thung, Toan Duc Bui, Jitae Shin, Guodong Zeng, Guoyan Zheng, Vladimir S. Fonov, Andrew Doyle, Yongchao Xu, Pim Moeskops, Josien P. W. Pluim, Christian Desrosiers, Ismail Ben Ayed, Gerard Sanroma, Oualid M. Benkarim, Adrià Casamitjana, Verónica Vilaplana, Weili Lin, Gang Li, Dinggang Shen
Benchmark on Automatic Six-Month-Old Infant Brain Segmentation Algorithms: The iSeg-2017 Challenge. IEEE Trans. Medical Imaging 38 (9) (2019)
Oualid M. Benkarim, Gemma Piella, Nadine Hahner, Elisenda Eixarch, Miguel Ángel González Ballester, Gerard Sanroma
Patch spaces and fusion strategies in patch-based label fusion. Comput. Medical Imaging Graph. 71 (2019)
Oualid M. Benkarim, Gerard Sanroma, Gemma Piella, Islem Rekik, Nadine Hahner, Elisenda Eixarch, Miguel Ángel González Ballester, Dinggang Shen, Gang Li
Revealing Regional Associations of Cortical Folding Alterations with In Utero Ventricular Dilation Using Joint Spectral Embedding. MICCAI (3) (2018)
Gerard Sanroma, Oualid M. Benkarim, Gemma Piella, Oscar Camara, Guorong Wu, Dinggang Shen, Juan Domingo Gispert, José Luis Molinuevo, Miguel Ángel González Ballester, Alzheimer's Disease Neuroimaging Initiative
Learning non-linear patch embeddings with neural networks for label fusion. Medical Image Anal. 44 (2018)
Gerard Sanroma, Oualid M. Benkarim, Gemma Piella, Karim Lekadir, Nadine Hahner, Elisenda Eixarch, Miguel Ángel González Ballester
Learning to combine complementary segmentation methods for fetal and 6-month infant brain MRI segmentation. Comput. Medical Imaging Graph. 69 (2018)
Jing Xia, Caiming Zhang, Fan Wang, Oualid M. Benkarim, Gerard Sanroma, Gemma Piella, Miguel Ángel González Ballester, Nadine Hahner, Elisenda Eixarch, Dinggang Shen, Gang Li
Fetal cortical parcellation based on growth patterns. ISBI (2018)
Oualid M. Benkarim, Gemma Piella, Miguel Ángel González Ballester, Gerard Sanroma
On the Role of Patch Spaces in Patch-Based Label Fusion. Patch-MI@MICCAI (2017)
Oualid M. Benkarim, Gemma Piella, Miguel Ángel González Ballester, Gerard Sanroma
Discriminative confidence estimation for probabilistic multi-atlas label fusion. Medical Image Anal. 42 (2017)
Gerard Sanroma, Víctor Andrea, Oualid M. Benkarim, José V. Manjón, Pierrick Coupé, Oscar Camara, Gemma Piella, Miguel Ángel González Ballester
Early Prediction of Alzheimer's Disease with Non-local Patch-Based Longitudinal Descriptors. Patch-MI@MICCAI (2017)
Oualid M. Benkarim, Gemma Piella, Miguel Ángel González Ballester, Gerard Sanroma
Enhanced Probabilistic Label Fusion by Estimating Label Confidences Through Discriminative Learning. MICCAI (2) (2016)
Gerard Sanroma, Oualid M. Benkarim, Gemma Piella, Miguel Ángel González Ballester
Building an Ensemble of Complementary Segmentation Methods by Exploiting Probabilistic Estimates. MLMI@MICCAI (2016)
Gerard Sanroma, Oualid M. Benkarim, Gemma Piella, Guorong Wu, Xiaofeng Zhu, Dinggang Shen, Miguel Ángel González Ballester
Discriminative Dimensionality Reduction for Patch-Based Label Fusion. MLMMI@ICML (2015)
Oualid M. Benkarim, Petia Radeva, Laura Igual
Label Consistent Multiclass Discriminative Dictionary Learning for MRI Segmentation. AMDO (2014)