Kasper D. Hansen

Publication Activity (10 Years)

Years Active: 2010-2022
Publications (10 Years): 4

Top Topics

Gene Expression

Preprocessing Steps

Top Venues

Briefings Bioinform.

PLoS Comput. Biol.

Publications

Yi Wang, Stephanie C. Hicks, Kasper D. Hansen
Addressing the mean-correlation relationship in co-expression analysis. PLoS Comput. Biol. 18 (3) (2022)
Jean-Philippe Fortin, Timothy Triche, Kasper D. Hansen
Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi. Bioinform. 33 (4) (2017)
Abhinav Nellore, Christopher Wilks, Kasper D. Hansen, Jeffrey T. Leek, Ben Langmead
Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce. Bioinform. 32 (16) (2016)
Lavanya Kannan, Marcel Ramos, Angela Re, Nehme Hachem, Zhaleh Safikhani, Deena M. A. Gendoo, Sean R. Davis, David Gomez-Cabrero, Robert Castelo, Kasper D. Hansen, Vincent J. Carey, Martin Morgan, Aedín C. Culhane, Benjamin Haibe-Kains, Levi Waldron
Public data and open source tools for multi-assay genomic investigation of disease. Briefings Bioinform. 17 (4) (2016)
Martin J. Aryee, Andrew E. Jaffe, Héctor Corrada Bravo, Christine Ladd-Acosta, Andrew P. Feinberg, Kasper D. Hansen, Rafael A. Irizarry
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinform. 30 (10) (2014)
Mike L. Smith, Keith A. Baggerly, Henrik Bengtsson, Matthew E. Ritchie, Kasper D. Hansen
: An open source IDAT parsing tool for Illumina microarrays. F1000Research 2 (2013)
James H. Bullard, Elizabeth Purdom, Kasper D. Hansen, Sandrine Dudoit
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. BMC Bioinform. 11 (2010)