David Gomez-Cabrero

Publication Activity (10 Years)

Years Active: 2011-2023
Publications (10 Years): 15

Top Topics

Chronic Obstructive Pulmonary Disease

Data Integration

Top Venues

Briefings Bioinform.

BMC Syst. Biol.

Publications

Srijith Radhakrishnan, Chao-Han Huck Yang, Sumeer Ahmad Khan, Rohit Kumar, Narsis A. Kiani, David Gomez-Cabrero, Jesper Tegnér
Whispering LLaMA: A Cross-Modal Generative Error Correction Framework for Speech Recognition. EMNLP (2023)
Srijith Radhakrishnan, Chao-Han Huck Yang, Sumeer Ahmad Khan, Rohit Kumar, Narsis A. Kiani, David Gomez-Cabrero, Jesper N. Tegnér
Whispering LLaMA: A Cross-Modal Generative Error Correction Framework for Speech Recognition. CoRR (2023)
Srijith Radhakrishnan, Chao-Han Huck Yang, Sumeer Ahmad Khan, Narsis Aftab Kiani, David Gomez-Cabrero, Jesper N. Tegnér
A Parameter-Efficient Learning Approach to Arabic Dialect Identification with Pre-Trained General-Purpose Speech Model. CoRR (2023)
Srijith Radhakrishnan, Chao-Han Huck Yang, Sumeer Ahmad Khan, Narsis A. Kiani, David Gomez-Cabrero, Jesper N. Tegnér
A Parameter-Efficient Learning Approach to Arabic Dialect Identification with Pre-Trained General-Purpose Speech Model. INTERSPEECH (2023)
Sumeer Ahmad Khan, Alberto Maillo, Vincenzo Lagani, Robert Lehmann, Narsis A. Kiani, David Gomez-Cabrero, Jesper Tegnér
Reusability report: Learning the transcriptional grammar in single-cell RNA-sequencing data using transformers. Nat. Mac. Intell. 5 (12) (2023)
Xabier Martinez-de-morentin, Sumeer Ahmad Khan, Robert Lehmann, Sally Sisi Qu, Alberto Maillo, Narsis A. Kiani, Felipe Prósper, Jesper Tegnér, David Gomez-Cabrero
LIBRA: an adaptative integrative tool for paired single-cell multi-omics data. Quant. Biol. 11 (3) (2023)
Ewoud Ewing, Nuria Planell-Picola, Maja Jagodic, David Gomez-Cabrero
GeneSetCluster: a tool for summarizing and integrating gene-set analysis results. BMC Bioinform. 21 (1) (2020)
Camden Jansen, Ricardo N. Ramirez, Nicole C. El-Ali, David Gomez-Cabrero, Jesper Tegnér, Matthias Merkenschlager, Ana Conesa, Ali Mortazavi
Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps. PLoS Comput. Biol. 15 (11) (2019)
Rise Ooi, Chao-Han Huck Yang, Pin-Yu Chen, Víctor M. Eguíluz, Narsis Aftab Kiani, Hector Zenil, David Gomez-Cabrero, Jesper Tegnér
Controllability, Multiplexing, and Transfer Learning in Networks using Evolutionary Learning. CoRR (2018)
Maria Needhamsen, Ewoud Ewing, Harald Lund, David Gomez-Cabrero, Robert Adam Harris, Lara Kular, Maja Jagodic
Usability of human Infinium MethylationEPIC BeadChip for mouse DNA methylation studies. BMC Bioinform. 18 (1) (2017)
Lavanya Kannan, Marcel Ramos, Angela Re, Nehme Hachem, Zhaleh Safikhani, Deena M. A. Gendoo, Sean R. Davis, David Gomez-Cabrero, Robert Castelo, Kasper D. Hansen, Vincent J. Carey, Martin Morgan, Aedín C. Culhane, Benjamin Haibe-Kains, Levi Waldron
Public data and open source tools for multi-assay genomic investigation of disease. Briefings Bioinform. 17 (4) (2016)
Vincenzo Lagani, Argyro D. Karozou, David Gomez-Cabrero, Gilad Silberberg, Ioannis Tsamardinos
Erratum to: A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions. BMC Bioinform. 17 (2016)
Ákos Tényi, Pedro de Atauri, David Gomez-Cabrero, Isaac Cano, Kim Clarke, Francesco Falciani, Marta Cascante, Josep Roca, Dieter Maier
ChainRank, a chain prioritisation method for contextualisation of biological networks. BMC Bioinform. 17 (2016)
David Gomez-Cabrero, Jörg Menche, Claudia Vargas, Isaac Cano, Dieter Maier, Albert-László Barabási, Jesper Tegnér, Josep Roca
From comorbidities of chronic obstructive pulmonary disease to identification of shared molecular mechanisms by data integration. BMC Bioinform. 17 (1) (2016)
Vincenzo Lagani, Argyro D. Karozou, David Gomez-Cabrero, Gilad Silberberg, Ioannis Tsamardinos
A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions. BMC Bioinform. 17 (S-5) (2016)
Frida Danielsson, Tojo James, David Gomez-Cabrero, Mikael Huss
Assessing the consistency of public human tissue RNA-seq data sets. Briefings Bioinform. 16 (6) (2015)
David Gomez-Cabrero, Imad Abugessaisa, Dieter Maier, Andrew E. Teschendorff, Matthias Merkenschlager, Andreas Gisel, Esteban Ballestar, Erik Bongcam-Rudloff, Ana Conesa, Jesper Tegnér
Data integration in the era of omics: current and future challenges. BMC Syst. Biol. 8 (S-2) (2014)
Rafael Hernández-de-Diego, Noemi Boix-Chova, David Gomez-Cabrero, Jesper Tegnér, Imad Abugessaisa, Ana Conesa
STATegra EMS: an Experiment Management System for complex next-generation omics experiments. BMC Syst. Biol. 8 (S-2) (2014)
Andrew E. Teschendorff, Francesco Marabita, Matthias Lechner, Thomas E. Bartlett, Jesper Tegnér, David Gomez-Cabrero, Stephan Beck
A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data. Bioinform. 29 (2) (2013)
Cristian Taccioli, Vincenza Maselli, Jesper Tegnér, David Gomez-Cabrero, Gioia Altobelli, Warren Emmett, Francesco Lescai, Stefano Gustincich, Elia Stupka
ParkDB: a Parkinson's disease gene expression database. Database J. Biol. Databases Curation 2011 (2011)