Abhinav Nellore

Publication Activity (10 Years)

Years Active: 2013-2022
Publications (10 Years): 10

Top Topics

String Matching

Tens Of Thousands

Multidimensional Databases

Top Venues

Publications

Abhinav Nellore, Rachel Ward
Arbitrary-Length Analogs to de Bruijn Sequences. CPM (2022)
Benjamin R. Weeder, Mary A Wood, Ellysia Li, Abhinav Nellore, Reid F. Thompson
pepsickle rapidly and accurately predicts proteasomal cleavage sites for improved neoantigen identification. Bioinform. 37 (21) (2021)
Abhinav Nellore, Rachel Ward
Arbitrary-length analogs to de Bruijn sequences. CoRR (2021)
Abhinav Nellore, Austin Nguyen, Reid F. Thompson
An Invertible Transform for Efficient String Matching in Labeled Digraphs. CPM (2021)
Mary A Wood, Austin Nguyen, Adam J. Struck, Kyle Ellrott, Abhinav Nellore, Reid F. Thompson
neoepiscope improves neoepitope prediction with multivariant phasing. Bioinform. 36 (3) (2020)
Abhinav Nellore, Austin Nguyen, Reid F. Thompson
A multidimensional analog to the Burrows-Wheeler transform. CoRR (2019)
Christopher Wilks, Phani Gaddipati, Abhinav Nellore, Ben Langmead
Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples. Bioinform. 34 (1) (2018)
Abhinav Nellore, Leonardo Collado-Torres, Andrew E. Jaffe, José Alquicira-Hernández, Christopher Wilks, Jacob Pritt, James Morton, Jeffrey T. Leek, Ben Langmead
Rail-RNA: scalable analysis of RNA-seq splicing and coverage. Bioinform. 33 (24) (2017)
Abhinav Nellore, Christopher Wilks, Kasper D. Hansen, Jeffrey T. Leek, Ben Langmead
Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce. Bioinform. 32 (16) (2016)
Abhinav Nellore, Rachel Ward
Recovery guarantees for exemplar-based clustering. Inf. Comput. 245 (2015)
Abhinav Nellore, Rachel Ward
Recovery guarantees for exemplar-based clustering. CoRR (2013)