Kyle Ellrott

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 4

Top Topics

Linear Prediction

Change Detection

Partial Occlusion

Top Venues

Publications

Alexander Kanitz, Matthew H. McLoughlin, Liam Beckman, Venkat S. Malladi, Kyle Ellrott
The GA4GH Task Execution API: Enabling Easy Multi Cloud Task Execution. CoRR (2024)
Mary A Wood, Austin Nguyen, Adam J. Struck, Kyle Ellrott, Abhinav Nellore, Reid F. Thompson
neoepiscope improves neoepitope prediction with multivariant phasing. Bioinform. 36 (3) (2020)
Dorota H. Sendorek, Cristian Caloian, Kyle Ellrott, J. Christopher Bare, Takafumi N. Yamaguchi, Adam D. Ewing, Kathleen E. Houlahan, Thea C. Norman, Adam A. Margolin, Joshua M. Stuart, Paul C. Boutros
Germline contamination and leakage in whole genome somatic single nucleotide variant detection. BMC Bioinform. 19 (1) (2018)
Christopher I Cooper, Delia Yao, Dorota H. Sendorek, Takafumi N. Yamaguchi, Christine P'ng, Kathleen E. Houlahan, Cristian Caloian, Michael Fraser, Kyle Ellrott, Adam A. Margolin, Robert G. Bristow, Joshua M. Stuart, Paul C. Boutros
Valection: design optimization for validation and verification studies. BMC Bioinform. 19 (1) (2018)
Mary Goldman, Brian Craft, Teresa Swatloski, Kyle Ellrott, Melissa S. Cline, Mark Diekhans, Singer Ma, Chris Wilks, Joshua M. Stuart, David Haussler, Jingchun Zhu
The UCSC Cancer Genomics Browser: update 2013. Nucleic Acids Res. 41 (Database-Issue) (2013)
Kyle Ellrott, Christian M. Zmasek, Dana Weekes, S. Sri Krishna, Constantina Bakolitsa, Adam Godzik, John C. Wooley
TOPSAN: a dynamic web database for structural genomics. Nucleic Acids Res. 39 (Database-Issue) (2011)
Kyle Ellrott, Lukasz Jaroszewski, Weizhong Li, John C. Wooley, Adam Godzik
Expansion of the Protein Repertoire in Newly Explored Environments: Human Gut Microbiome Specific Protein Families. PLoS Comput. Biol. 6 (6) (2010)
Kyle Ellrott, Jun-tao Guo, Victor Olman, Ying Xu
Improving the Performance of protein Threading Using Insertion/Deletion Frequency Arrays. J. Bioinform. Comput. Biol. 6 (3) (2008)
Jun-tao Guo, Kyle Ellrott, Won Jae Chung, Dong Xu, Sergei Passovets, Ying Xu
PROSPECT-PSPP: an automatic computational pipeline for protein structure prediction. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang, Inna Vokler, Philip F. LoCascio, Dong Xu, Ying Xu
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale. BIBE (2003)
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang, Inna Vokler, Philip F. LoCascio, Dong Xu, Ying Xu
A computational pipeline for protein structure prediction and analysis at genome scale. Bioinform. 19 (15) (2003)
Kyle Ellrott, Chuhu Yang, Frances M. Sladek, Tao Jiang
Identifying transcription factor binding sites through Markov chain optimization. ECCB (2002)