Hrvoje Bogunovic

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 69

Top Topics

Volumetric Data

Optical Coherence Tomography

Top Venues

IEEE Trans. Medical Imaging

IEEE J. Biomed. Health Informatics

Publications

Guilherme Aresta, Teresa Araújo, Botond Fazekas, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Interactive Deep Learning-Based Retinal OCT Layer Segmentation Refinement by Regressing Translation Maps. IEEE Access 12 (2024)
José Morano, Guilherme Aresta, Christoph Grechenig, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Deep Multimodal Fusion of Data with Heterogeneous Dimensionality via Projective Networks. CoRR (2024)
Philipp Seeböck, José Ignacio Orlando, Martin Michl, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Anomaly guided segmentation: Introducing semantic context for lesion segmentation in retinal OCT using weak context supervision from anomaly detection. Medical Image Anal. 93 (2024)
José Morano, Guilherme Aresta, Christoph Grechenig, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Deep Multimodal Fusion of Data With Heterogeneous Dimensionality via Projective Networks. IEEE J. Biomed. Health Informatics 28 (4) (2024)
Robbie Holland, Thomas R. P. Taylor, Christopher Holmes, Sophie Riedl, Julia Mai, Maria Patsiamanidi, Dimitra Mitsopoulou, Paul Hager, Philip Müller, Hendrik P. N. Scholl, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Daniel Rueckert, Sobha Sivaprasad, Andrew J. Lotery, Martin J. Menten
Specialist vision-language models for clinical ophthalmology. CoRR (2024)
Dmitrii A. Lachinov, Arunava Chakravarty, Christoph Grechenig, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Learning Spatio-Temporal Model of Disease Progression With NeuralODEs From Longitudinal Volumetric Data. IEEE Trans. Medical Imaging 43 (3) (2024)
Coen de Vente, Koenraad A. Vermeer, Nicolas Jaccard, He Wang, Hongyi Sun, Firas Khader, Daniel Truhn, Temirgali Aimyshev, Yerkebulan Zhanibekuly, Tien-Dung Le, Adrian Galdran, Miguel Ángel González Ballester, Gustavo Carneiro, Devika R. G, Hrishikesh Panikkasseril Sethumadhavan, Densen Puthussery, Hong Liu, Zekang Yang, Satoshi Kondo, Satoshi Kasai, Edward Wang, Ashritha Durvasula, Jónathan Heras, Miguel Ángel Zapata, Teresa Araújo, Guilherme Aresta, Hrvoje Bogunovic, Mustafa Arikan, Yeong Chan Lee, Hyun Bin Cho, Yoon Ho Choi, Abdul Qayyum, Imran Razzak, Bram van Ginneken, Hans G. Lemij, Clara I. Sánchez
AIROGS: Artificial Intelligence for Robust Glaucoma Screening Challenge. IEEE Trans. Medical Imaging 43 (1) (2024)
Taha Emre, Arunava Chakravarty, Dmitrii A. Lachinov, Antoine Rivail, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Time-Equivariant Contrastive Learning for Degenerative Disease Progression in Retinal OCT. CoRR (2024)
José Morano, Guilherme Aresta, Hrvoje Bogunovic
RRWNet: Recursive Refinement Network for Effective Retinal Artery/Vein Segmentation and Classification. CoRR (2024)
José Morano, Guilherme Aresta, Hrvoje Bogunovic
RRWNet: Recursive Refinement Network for effective retinal artery/vein segmentation and classification. Expert Syst. Appl. 256 (2024)
Chengzhi Shen, Martin J. Menten, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Hendrik P. N. Scholl, Sobha Sivaprasad, Andrew J. Lotery, Daniel Rueckert, Paul Hager, Robbie Holland
Spatiotemporal Representation Learning for Short and Long Medical Image Time Series. CoRR (2024)
Robbie Holland, Rebecca Kaye, Ahmed M. Hagag, Oliver Leingang, Thomas R. P. Taylor, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Hendrik P. N. Scholl, Daniel Rueckert, Andrew J. Lotery, Sobha Sivaprasad, Martin J. Menten
Deep-learning-based clustering of OCT images for biomarker discovery in age-related macular degeneration (Pinnacle study report 4). CoRR (2024)
Marzieh Oghbaie, Teresa Araujo, Taha Emre, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Transformer-based end-to-end classification of variable-length volumetric data. CoRR (2023)
Botond Fazekas, Dmitry A. Lachinov, Guilherme Aresta, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Segmentation of Bruch's Membrane in Retinal OCT With AMD Using Anatomical Priors and Uncertainty Quantification. IEEE J. Biomed. Health Informatics 27 (1) (2023)
Junde Wu, Huihui Fang, Fei Li, Huazhu Fu, Fengbin Lin, Jiongcheng Li, Yue Huang, Qinji Yu, Sifan Song, Xinxing Xu, Yanyu Xu, Wensai Wang, Lingxiao Wang, Shuai Lu, Huiqi Li, Shihua Huang, Zhichao Lu, Chubin Ou, Xifei Wei, Bingyuan Liu, Riadh Kobbi, Xiaoying Tang, Li Lin, Qiang Zhou, Qiang Hu, Hrvoje Bogunovic, José Ignacio Orlando, Xiulan Zhang, Yanwu Xu
GAMMA challenge: Glaucoma grAding from Multi-Modality imAges. Medical Image Anal. 90 (2023)
Taha Emre, Marzieh Oghbaie, Arunava Chakravarty, Antoine Rivail, Sophie Riedl, Julia Mai, Hendrik P. N. Scholl, Sobha Sivaprasad, Daniel Rueckert, Andrew J. Lotery, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Pretrained Deep 2.5D Models for Efficient Predictive Modeling from Retinal OCT. CoRR (2023)
Robbie Holland, Oliver Leingang, Christopher Holmes, Philipp Anders, Rebecca Kaye, Sophie Riedl, Johannes C. Paetzold, Ivan Ezhov, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Hendrik P. N. Scholl, Sobha Sivaprasad, Andrew J. Lotery, Daniel Rueckert, Martin J. Menten
Clustering Disease Trajectories in Contrastive Feature Space for Biomarker Proposal in Age-Related Macular Degeneration. MICCAI (7) (2023)
José Morano, Guilherme Aresta, Dmitry A. Lachinov, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Self-supervised Learning via Inter-modal Reconstruction and Feature Projection Networks for Label-Efficient 3D-to-2D Segmentation. MICCAI (4) (2023)
Huihui Fang, Fei Li, Junde Wu, Huazhu Fu, Xu Sun, José Ignacio Orlando, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
PALM: Open Fundus Photograph Dataset with Pathologic Myopia Recognition and Anatomical Structure Annotation. CoRR (2023)
Taha Emre, Marzieh Oghbaie, Arunava Chakravarty, Antoine Rivail, Sophie Riedl, Julia Mai, Hendrik P. N. Scholl, Sobha Sivaprasad, Daniel Rueckert, Andrew J. Lotery, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Pretrained Deep 2.5D Models for Efficient Predictive Modeling from Retinal OCT: A PINNACLE Study Report. OMIA@MICCAI (2023)
Botond Fazekas, José Morano, Dmitrii A. Lachinov, Guilherme Aresta, Hrvoje Bogunovic
SAMedOCT: Adapting Segment Anything Model (SAM) for Retinal OCT. CoRR (2023)
Arunava Chakravarty, Taha Emre, Oliver Leingang, Sophie Riedl, Julia Mai, Hendrik P. N. Scholl, Sobha Sivaprasad, Daniel Rueckert, Andrew J. Lotery, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Morph-SSL: Self-Supervision with Longitudinal Morphing to Predict AMD Progression from OCT. CoRR (2023)
Coen de Vente, Koenraad A. Vermeer, Nicolas Jaccard, He Wang, Hongyi Sun, Firas Khader, Daniel Truhn, Temirgali Aimyshev, Yerkebulan Zhanibekuly, Tien-Dung Le, Adrian Galdran, Miguel Ángel González Ballester, Gustavo Carneiro, Devika R. G, Hrishikesh P. S, Densen Puthussery, Hong Liu, Zekang Yang, Satoshi Kondo, Satoshi Kasai, Edward Wang, Ashritha Durvasula, Jónathan Heras, Miguel Ángel Zapata, Teresa Araújo, Guilherme Aresta, Hrvoje Bogunovic, Mustafa Arikan, Yeong Chan Lee, Hyun Bin Cho, Yoon Ho Choi, Abdul Qayyum, Imran Razzak, Bram van Ginneken, Hans G. Lemij, Clara I. Sánchez
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge. CoRR (2023)
José Morano, Guilherme Aresta, Dmitrii A. Lachinov, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Self-supervised learning via inter-modal reconstruction and feature projection networks for label-efficient 3D-to-2D segmentation. CoRR (2023)
Robbie Holland, Oliver Leingang, Christopher Holmes, Philipp Anders, Johannes C. Paetzold, Rebecca Kaye, Sophie Riedl, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Lars Fritsche, Hendrik P. N. Scholl, Sobha Sivaprasad, Andrew J. Lotery, Daniel Rueckert, Martin J. Menten
Clustering disease trajectories in contrastive feature space for biomarker discovery in age-related macular degeneration. CoRR (2023)
Taha Emre, Arunava Chakravarty, Antoine Rivail, Dmitrii A. Lachinov, Oliver Leingang, Sophie Riedl, Julia Mai, Hendrik P. N. Scholl, Sobha Sivaprasad, Daniel Rueckert, Andrew J. Lotery, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
3DTINC: Time-Equivariant Non-Contrastive Learning for Predicting Disease Progression from Longitudinal OCTs. CoRR (2023)
Marzieh Oghbaie, Teresa Araújo, Taha Emre, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Transformer-Based End-to-End Classification of Variable-Length Volumetric Data. MICCAI (6) (2023)
Botond Fazekas, José Morano, Dmitry A. Lachinov, Guilherme Aresta, Hrvoje Bogunovic
Adapting Segment Anything Model (SAM) for Retinal OCT. OMIA@MICCAI (2023)
Taha Emre, Arunava Chakravarty, Antoine Rivail, Sophie Riedl, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
TINC: Temporally Informed Non-contrastive Learning for Disease Progression Modeling in Retinal OCT Volumes. MICCAI (2) (2022)
Teresa Araújo, Guilherme Aresta, Hrvoje Bogunovic
Deep Dirichlet uncertainty for unsupervised out-of-distribution detection of eye fundus photographs in glaucoma screening. CoRR (2022)
Robbie Holland, Oliver Leingang, Hrvoje Bogunovic, Sophie Riedl, Lars Fritsche, Toby Prevost, Hendrik P. N. Scholl, Ursula Schmidt-Erfurth, Sobha Sivaprasad, Andrew J. Lotery, Daniel Rueckert, Martin J. Menten
Metadata-enhanced contrastive learning from retinal optical coherence tomography images. CoRR (2022)
Taha Emre, Arunava Chakravarty, Antoine Rivail, Sophie Riedl, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
TINC: Temporally Informed Non-Contrastive Learning for Disease Progression Modeling in Retinal OCT Volumes. CoRR (2022)
Simon Schürer-Waldheim, Philipp Seeböck, Hrvoje Bogunovic, Bianca S. Gerendas, Ursula Schmidt-Erfurth
Robust Fovea Detection in Retinal OCT Imaging Using Deep Learning. IEEE J. Biomed. Health Informatics 26 (8) (2022)
Huihui Fang, Fei Li, Huazhu Fu, Xu Sun, Xingxing Cao, Jaemin Son, Shuang Yu, Menglu Zhang, Chenglang Yuan, Cheng Bian, Baiying Lei, Benjian Zhao, Xinxing Xu, Shaohua Li, Francisco Fumero, José F. Sigut, Haidar Almubarak, Yakoub Bazi, Yuanhao Guo, Yating Zhou, Ujjwal Baid, Shubham Innani, Tianjiao Guo, Jie Yang, José Ignacio Orlando, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
REFUGE2 Challenge: Treasure for Multi-Domain Learning in Glaucoma Assessment. CoRR (2022)
Botond Fazekas, Guilherme Aresta, Dmitry A. Lachinov, Sophie Riedl, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
SD-LayerNet: Semi-supervised Retinal Layer Segmentation in OCT Using Disentangled Representation with Anatomical Priors. MICCAI (8) (2022)
Huihui Fang, Fei Li, Huazhu Fu, Xu Sun, Xingxing Cao, Fengbin Lin, Jaemin Son, Sunho Kim, Gwenolé Quellec, Sarah Matta, Sharath M. Shankaranarayana, Yi-Ting Chen, Chuen-heng Wang, Nisarg A. Shah, Chia-Yen Lee, Chih-Chung Hsu, Hai Xie, Baiying Lei, Ujjwal Baid, Shubham Innani, Kang Dang, Wenxiu Shi, Ravi Kamble, Nitin Singhal, Ching-Wei Wang, Shih-Chang Lo, José Ignacio Orlando, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
ADAM Challenge: Detecting Age-Related Macular Degeneration From Fundus Images. IEEE Trans. Medical Imaging 41 (10) (2022)
Huihui Fang, Fei Li, Huazhu Fu, Xu Sun, Xingxing Cao, Fengbin Lin, Jaemin Son, Sunho Kim, Gwénolé Quellec, Sarah Matta, Sharath M. Shankaranarayana, Yi-Ting Chen, Chuen-heng Wang, Nisarg A. Shah, Chia-Yen Lee, Chih-Chung Hsu, Hai Xie, Baiying Lei, Ujjwal Baid, Shubham Innani, Kang Dang, Wenxiu Shi, Ravi Kamble, Nitin Singhal, José Ignacio Orlando, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
ADAM Challenge: Detecting Age-related Macular Degeneration from Fundus Images. CoRR (2022)
Junde Wu, Huihui Fang, Fei Li, Huazhu Fu, Fengbin Lin, Jiongcheng Li, Lexing Huang, Qinji Yu, Sifan Song, Xingxing Xu, Yanyu Xu, Wensai Wang, Lingxiao Wang, Shuai Lu, Huiqi Li, Shihua Huang, Zhichao Lu, Chubin Ou, Xifei Wei, Bingyuan Liu, Riadh Kobbi, Xiaoying Tang, Li Lin, Qiang Zhou, Qiang Hu, Hrvoje Bogunovic, José Ignacio Orlando, Xiulan Zhang, Yanwu Xu
GAMMA Challenge: Glaucoma grAding from Multi-Modality imAges. CoRR (2022)
Dmitrii A. Lachinov, Arunava Chakravarty, Christoph Grechenig, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Learning Spatio-Temporal Model of Disease Progression with NeuralODEs from Longitudinal Volumetric Data. CoRR (2022)
Botond Fazekas, Dmitrii A. Lachinov, Guilherme Aresta, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Segmentation of Bruch's Membrane in retinal OCT with AMD using anatomical priors and uncertainty quantification. CoRR (2022)
Botond Fazekas, Guilherme Aresta, Dmitrii A. Lachinov, Sophie Riedl, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
SD-LayerNet: Semi-supervised retinal layer segmentation in OCT using disentangled representation with anatomical priors. CoRR (2022)
Osama N. Hassan, Martin J. Menten, Hrvoje Bogunovic, Ursula Schmidt-Erfurth, Andrew Lotery, Daniel Rueckert
Deep Learning Prediction Of Age And Sex From Optical Coherence Tomography. ISBI (2021)
Dmitrii A. Lachinov, Philipp Seeböck, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Projective Skip-Connections for Segmentation Along a Subset of Dimensions in Retinal OCT. CoRR (2021)
Dmitrii A. Lachinov, Philipp Seeböck, Julia Mai, Felix Goldbach, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Projective Skip-Connections for Segmentation Along a Subset of Dimensions in Retinal OCT. MICCAI (1) (2021)
Huazhu Fu, Fei Li, Xu Sun, Xingxing Cao, Jingan Liao, José Ignacio Orlando, Xing Tao, Yuexiang Li, Shihao Zhang, Mingkui Tan, Chenglang Yuan, Cheng Bian, Ruitao Xie, Jiongcheng Li, Xiaomeng Li, Jing Wang, Le Geng, Panming Li, Huaying Hao, Jiang Liu, Yan Kong, Yongyong Ren, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
AGE Challenge: Angle Closure Glaucoma Evaluation in Anterior Segment Optical Coherence Tomography. CoRR (2020)
Philipp Seeböck, José Ignacio Orlando, Thomas Schlegl, Sebastian M. Waldstein, Hrvoje Bogunovic, Sophie Klimscha, Georg Langs, Ursula Schmidt-Erfurth
Exploiting Epistemic Uncertainty of Anatomy Segmentation for Anomaly Detection in Retinal OCT. IEEE Trans. Medical Imaging 39 (1) (2020)
Philipp Seeböck, José Ignacio Orlando, Thomas Schlegl, Sebastian M. Waldstein, Hrvoje Bogunovic, Sophie Klimscha, Georg Langs, Ursula Schmidt-Erfurth
Correction to "Exploiting Epistemic Uncertainty of Anatomy Segmentation for Anomaly Detection in Retinal OCT". IEEE Trans. Medical Imaging 39 (4) (2020)
David Romo-Bucheli, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
End-to-End Deep Learning Model for Predicting Treatment Requirements in Neovascular AMD From Longitudinal Retinal OCT Imaging. IEEE J. Biomed. Health Informatics 24 (12) (2020)
José Ignacio Orlando, Huazhu Fu, João Barbosa Breda, Karel van Keer, Deepti R. Bathula, Andrés Diaz-Pinto, Ruogu Fang, Pheng-Ann Heng, Jeyoung Kim, Joonho Lee, Joonseok Lee, Xiaoxiao Li, Peng Liu, Shuai Lu, Balamurali Murugesan, Valery Naranjo, Sai Samarth R. Phaye, Sharath M. Shankaranarayana, Hrvoje Bogunovic
REFUGE Challenge: A unified framework for evaluating automated methods for glaucoma assessment from fundus photographs. Medical Image Anal. 59 (2020)
Rhona Asgari, José Ignacio Orlando, Sebastian M. Waldstein, Ferdinand Schlanitz, Magdalena Baratsits, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Multiclass Segmentation as Multitask Learning for Drusen Segmentation in Retinal Optical Coherence Tomography. MICCAI (1) (2019)
Antoine Rivail, Ursula Schmidt-Erfurth, Wolf-Dieter Vogl, Sebastian M. Waldstein, Sophie Riedl, Christoph Grechenig, Zhichao Wu, Hrvoje Bogunovic
Modeling Disease Progression in Retinal OCTs with Longitudinal Self-supervised Learning. PRIME@MICCAI (2019)
Rhona Asgari, José Ignacio Orlando, Sebastian M. Waldstein, Ferdinand Schlanitz, Magdalena Baratsits, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Multiclass segmentation as multitask learning for drusen segmentation in retinal optical coherence tomography. CoRR (2019)
Antoine Rivail, Ursula Schmidt-Erfurth, Wolf-Dieter Vogl, Sebastian M. Waldstein, Sophie Riedl, Christoph Grechenig, Zhichao Wu, Hrvoje Bogunovic
Modeling Disease Progression In Retinal OCTs With Longitudinal Self-Supervised Learning. CoRR (2019)
Hrvoje Bogunovic, Freerk G. Venhuizen, Sophie Klimscha, Stefanos Apostolopoulos, Alireza Bab-Hadiashar, Ulas Bagci, Mirza Faisal Beg, Loza Bekalo, Qiang Chen, Carlos Ciller, Karthik Gopinath, Amirali K. Gostar, Kiwan Jeon, Zexuan Ji, Sung Ho Kang, Dara D. Koozekanani, Donghuan Lu, Dustin Morley, Keshab K. Parhi, Hyoung Suk Park, Abdolreza Rashno, Marinko Sarunic, Saad Shaikh, Jayanthi Sivaswamy, Ruwan B. Tennakoon, Shivin Yadav, Sandro De Zanet, Sebastian M. Waldstein, Bianca S. Gerendas, Caroline Klaver, Clara I. Sánchez, Ursula Schmidt-Erfurth
RETOUCH: The Retinal OCT Fluid Detection and Segmentation Benchmark and Challenge. IEEE Trans. Medical Imaging 38 (8) (2019)
José Ignacio Orlando, Huazhu Fu, João Barbosa Breda, Karel van Keer, Deepti R. Bathula, Andrés Diaz-Pinto, Ruogu Fang, Pheng-Ann Heng, Jeyoung Kim, Joonho Lee, Joonseok Lee, Xiaoxiao Li, Peng Liu, Shuai Lu, Balamurali Murugesan, Valery Naranjo, Sai Samarth R. Phaye, Sharath M. Shankaranarayana, Apoorva Sikka, Jaemin Son, Anton van den Hengel, Shujun Wang, Junyan Wu, Zifeng Wu, Guanghui Xu, Yong-Li Xu, Pengshuai Yin, Fei Li, Xiulan Zhang, Yanwu Xu, Hrvoje Bogunovic
REFUGE Challenge: A Unified Framework for Evaluating Automated Methods for Glaucoma Assessment from Fundus Photographs. CoRR (2019)
Philipp Seeböck, David Romo-Bucheli, Sebastian M. Waldstein, Hrvoje Bogunovic, José Ignacio Orlando, Bianca S. Gerendas, Georg Langs, Ursula Schmidt-Erfurth
Using Cyclegans for Effectively Reducing Image Variability Across OCT Devices and Improving Retinal Fluid Segmentation. ISBI (2019)
Rhona Asgari, Sebastian M. Waldstein, Ferdinand Schlanitz, Magdalena Baratsits, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
U-Net with spatial pyramid pooling for drusen segmentation in optical coherence tomography. CoRR (2019)
Philipp Seeböck, Sebastian M. Waldstein, Sophie Klimscha, Hrvoje Bogunovic, Thomas Schlegl, Bianca S. Gerendas, Rene Donner, Ursula Schmidt-Erfurth, Georg Langs
Unsupervised Identification of Disease Marker Candidates in Retinal OCT Imaging Data. IEEE Trans. Medical Imaging 38 (4) (2019)
José Ignacio Orlando, Anna Breger, Hrvoje Bogunovic, Sophie Riedl, Bianca S. Gerendas, Martin Ehler, Ursula Schmidt-Erfurth
An amplified-target loss approach for photoreceptor layer segmentation in pathological OCT scans. CoRR (2019)
Philipp Seeböck, David Romo-Bucheli, Sebastian M. Waldstein, Hrvoje Bogunovic, José Ignacio Orlando, Bianca S. Gerendas, Georg Langs, Ursula Schmidt-Erfurth
Using CycleGANs for effectively reducing image variability across OCT devices and improving retinal fluid segmentation. CoRR (2019)
Philipp Seeböck, José Ignacio Orlando, Thomas Schlegl, Sebastian M. Waldstein, Hrvoje Bogunovic, Sophie Klimscha, Georg Langs, Ursula Schmidt-Erfurth
Exploiting Epistemic Uncertainty of Anatomy Segmentation for Anomaly Detection in Retinal OCT. CoRR (2019)
José Ignacio Orlando, Anna Breger, Hrvoje Bogunovic, Sophie Riedl, Bianca S. Gerendas, Martin Ehler, Ursula Schmidt-Erfurth
An Amplified-Target Loss Approach for Photoreceptor Layer Segmentation in Pathological OCT Scans. OMIA@MICCAI (2019)
Rhona Asgari, Sebastian M. Waldstein, Ferdinand Schlanitz, Magdalena Baratsits, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
U-Net with Spatial Pyramid Pooling for Drusen Segmentation in Optical Coherence Tomography. OMIA@MICCAI (2019)
José Ignacio Orlando, Philipp Seeböck, Hrvoje Bogunovic, Sophie Klimscha, Christoph Grechenig, Sebastian M. Waldstein, Bianca S. Gerendas, Ursula Schmidt-Erfurth
U2-Net: A Bayesian U-Net model with epistemic uncertainty feedback for photoreceptor layer segmentation in pathological OCT scans. CoRR (2019)
José Ignacio Orlando, Philipp Seeböck, Hrvoje Bogunovic, Sophie Klimscha, Christoph Grechenig, Sebastian M. Waldstein, Bianca S. Gerendas, Ursula Schmidt-Erfurth
U2-Net: A Bayesian U-Net Model With Epistemic Uncertainty Feedback For Photoreceptor Layer Segmentation In Pathological OCT Scans. ISBI (2019)
Thomas Schlegl, Hrvoje Bogunovic, Sophie Klimscha, Philipp Seeböck, Amir Sadeghipour, Bianca S. Gerendas, Sebastian M. Waldstein, Georg Langs, Ursula Schmidt-Erfurth
Fully Automated Segmentation of Hyperreflective Foci in Optical Coherence Tomography Images. CoRR (2018)
Philipp Seeböck, Sebastian M. Waldstein, Sophie Klimscha, Hrvoje Bogunovic, Thomas Schlegl, Bianca S. Gerendas, René Donner, Ursula Schmidt-Erfurth, Georg Langs
Unsupervised Identification of Disease Marker Candidates in Retinal OCT Imaging Data. CoRR (2018)
Annika Reinke, Matthias Eisenmann, Sinan Onogur, Marko Stankovic, Patrick Scholz, Peter M. Full, Hrvoje Bogunovic, Bennett A. Landman, Oskar Maier, Bjoern H. Menze, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Fons van der Sommen, Guoyan Zheng, Henning Müller, Michal Kozubek, Tal Arbel, Andrew P. Bradley, Pierre Jannin, Annette Kopp-Schneider, Lena Maier-Hein
How to Exploit Weaknesses in Biomedical Challenge Design and Organization. MICCAI (4) (2018)
Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro J. Niessen, Nasir M. Rajpoot, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Christian Stock, Danail Stoyanov, Abdel Aziz Taha, Fons van der Sommen, Ching-Wei Wang, Marc-André Weber, Guoyan Zheng, Pierre Jannin, Annette Kopp-Schneider
Is the winner really the best? A critical analysis of common research practice in biomedical image analysis competitions. CoRR (2018)
Hrvoje Bogunovic, Milan Sonka, Young H. Kwon, Pavlina Kemp, Michael D. Abràmoff, Xiaodong Wu
Multi-Surface and Multi-Field Co-Segmentation of 3-D Retinal Optical Coherence Tomography. IEEE Trans. Medical Imaging 33 (12) (2014)
Hrvoje Bogunovic, José María Pozo, Rubén Cárdenes, Luis San-Román, Alejandro F. Frangi
Anatomical Labeling of the Circle of Willis Using Maximum A Posteriori Probability Estimation. IEEE Trans. Medical Imaging 32 (9) (2013)
Hrvoje Bogunovic, José María Pozo, Rubén Cárdenes, Maria-Cruz Villa-Uriol, Raphaël Blanc, Michel Piotin, Alejandro F. Frangi
Automated landmarking and geometric characterization of the carotid siphon. Medical Image Anal. 16 (4) (2012)
Ignacio Larrabide, Maria-Cruz Villa-Uriol, Rubén Cárdenes, Valeria Barbarito, Luigi Carotenuto, Arjan J. Geers, Hernán G. Morales, José María Pozo, Marco D. Mazzeo, Hrvoje Bogunovic, Pedro Omedas, Chiara Riccobene, Juan M. Macho, Alejandro F. Frangi
AngioLab - A software tool for morphological analysis and endovascular treatment planning of intracranial aneurysms. Comput. Methods Programs Biomed. 108 (2) (2012)
Rubén Cárdenes, José-Luis Díez, Ignacio Larrabide, Hrvoje Bogunovic, Alejandro F. Frangi
3D Modeling of Coronary Artery Bifurcations from CTA and Conventional Coronary Angiography. MICCAI (3) (2011)
Hrvoje Bogunovic, José María Pozo, Rubén Cárdenes, Alejandro F. Frangi
Anatomical Labeling of the Anterior Circulation of the Circle of Willis Using Maximum a Posteriori Classification. MICCAI (3) (2011)
Rubén Cárdenes, José María Pozo, Hrvoje Bogunovic, Ignacio Larrabide, Alejandro F. Frangi
Automatic Aneurysm Neck Detection Using Surface Voronoi Diagrams. IEEE Trans. Medical Imaging 30 (10) (2011)
Rubén Cárdenes, Hrvoje Bogunovic, Alejandro F. Frangi
Fast 3D centerline computation for tubular structures by front collapsing and fast marching. ICIP (2010)
Arjan J. Geers, Ignacio Larrabide, Alessandro Radaelli, Hrvoje Bogunovic, Hugo A. F. Gratama van Andel, Charles B. L. M. Majoie, Alejandro F. Frangi
Reproducibility of Image-Based Computational Hemodynamics in Intracranial Aneurysms: Comparison of CTA and 3DRA. ISBI (2009)
Michiel Schaap, Coert Metz, Theo van Walsum, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic, Carlos Castro-Gonzalez, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz, Maciej Orkisz, Örjan Smedby, Martin Styner, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen
Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. Medical Image Anal. 13 (5) (2009)
Hrvoje Bogunovic, Alessandro G. Radaelli, Mathieu De Craene, David Delgado-Gómez, Alejandro F. Frangi
Image intensity standardization in 3D rotational angiography and its application to vascular segmentation. Medical Imaging: Image Processing (2008)
Hrvoje Bogunovic, Sven Loncaric
Blood Flow and Velocity Estimation Based on Vessel Transit Time by Combining 2D and 3D X-Ray Angiography. MICCAI (2) (2006)
Hrvoje Bogunovic, Sven Loncaric
Denoising of Time-Density Data in Digital Subtraction Angiography. SCIA (2005)