Mirza Faisal Beg

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 34

Top Topics

Optical Coherence Tomography

Early Diagnosis

Top Venues

Comput. Medical Imaging Graph.

Medical Image Anal.

IEEE Trans. Medical Imaging

Publications

Cédric Beaulac, Sidi Wu, Erin Gibson, Michelle F. Miranda, Jiguo Cao, Leno Rocha, Mirza Faisal Beg, Farouk S. Nathoo
Neuroimaging feature extraction using a neural network classifier for imaging genetics. BMC Bioinform. 24 (1) (2023)
Timothy T. Yu, Da Ma, Jayden Cole, Myeong Jin Ju, Mirza Faisal Beg, Marinko V. Sarunic
Spectral Bandwidth Recovery of Optical Coherence Tomography Images using Deep Learning. CoRR (2023)
Shuo Chen, Da Ma, Sieun Lee, Timothy T. L. Yu, Gavin Xu, Donghuan Lu, Karteek Popuri, Myeong Jin Ju, Marinko V. Sarunic, Mirza Faisal Beg
Segmentation-guided domain adaptation and data harmonization of multi-device retinal optical coherence tomography using cycle-consistent generative adversarial networks. Comput. Biol. Medicine 159 (2023)
Ghazal Mirabnahrazam, Da Ma, Sieun Lee, Karteek Popuri, Hyunwoo Lee, Jiguo Cao, Lei Wang, James E. Galvin, Mirza Faisal Beg, Alzheimer's Disease Neuroimaging Initiative
Machine Learning Based Multimodal Neuroimaging Genomics Dementia Score for Predicting Future Conversion to Alzheimer's Disease. CoRR (2022)
Ghazal Mirabnahrazam, Da Ma, Cédric Beaulac, Sieun Lee, Karteek Popuri, Hyunwoo Lee, Jiguo Cao, James E. Galvin, Lei Wang, Mirza Faisal Beg, Alzheimer's Disease Neuroimaging Initiative
Predicting Time-to-conversion for Dementia of Alzheimer's Type using Multi-modal Deep Survival Analysis. CoRR (2022)
Da Ma, Meenakshi Kumar, Vikas Khetan, Parveen Sen, Muna Bhende, Shuo Chen, Timothy T. L. Yu, Sieun Lee, Eduardo V. Navajas, Joanne A. Matsubara, Myeong Jin Ju, Marinko V. Sarunic, Rajiv Raman, Mirza Faisal Beg
Clinical explainable differential diagnosis of polypoidal choroidal vasculopathy and age-related macular degeneration using deep learning. Comput. Biol. Medicine 143 (2022)
Shuo Chen, Da Ma, Sieun Lee, Timothy T. L. Yu, Gavin Xu, Donghuan Lu, Karteek Popuri, Myeong Jin Ju, Marinko V. Sarunic, Mirza Faisal Beg
Segmentation-guided Domain Adaptation and Data Harmonization of Multi-device Retinal Optical Coherence Tomography using Cycle-Consistent Generative Adversarial Networks. CoRR (2022)
Cédric Beaulac, Sidi Wu, Erin Gibson, Michelle F. Miranda, Jiguo Cao, Leno Rocha, Mirza Faisal Beg, Farouk S. Nathoo
Neuroimaging Feature Extraction using a Neural Network Classifier for Imaging Genetics. CoRR (2022)
Alexei Taylor, Fengqing (Zoe) Zhang, Xin Niu, Ashley Heywood, Jane Stocks, Gangyi Feng, Karteek Popuri, Mirza Faisal Beg, Lei Wang
Investigating the temporal pattern of neuroimaging-based brain age estimation as a biomarker for Alzheimer's Disease related neurodegeneration. NeuroImage 263 (2022)
Evangeline Yee, Da Ma, Karteek Popuri, Shuo Chen, Hyunwoo Lee, Vincent Chow, Cydney Ma, Lei Wang, Mirza Faisal Beg
3D hemisphere-based convolutional neural network for whole-brain MRI segmentation. Comput. Medical Imaging Graph. 95 (2022)
Haolun Shi, Yuping Yang, Liangliang Wang, Da Ma, Mirza Faisal Beg, Jian Pei, Jiguo Cao
Two-Dimensional Functional Principal Component Analysis for Image Feature Extraction. J. Comput. Graph. Stat. 31 (4) (2022)
Timothy T. Yu, Da Ma, Jayden Cole, MyeongJin Ju, Mirza Faisal Beg, Marinko V. Sarunic
Spectral Bandwidth Recovery of Optical Coherence Tomography Images using Deep Learning. ISPA (2021)
Da Ma, Vincent Chow, Karteek Popuri, Mirza Faisal Beg
Comprehensive Validation of Automated Whole Body Skeletal Muscle, Adipose Tissue, and Bone Segmentation from 3D CT images for Body Composition Analysis: Towards Extended Body Composition. CoRR (2021)
Ricky Chen, Timothy T. Yu, Gavin Xu, Da Ma, Marinko V. Sarunic, Mirza Faisal Beg
Domain Adaptation via CycleGAN for Retina Segmentation in Optical Coherence Tomography. CoRR (2021)
Da Ma, Donghuan Lu, Shuo Chen, Morgan Heisler, Setareh Dabiri, Sieun Lee, Hyunwoo Lee, Gavin Weiguang Ding, Marinko V. Sarunic, Mirza Faisal Beg
LF-UNet - A novel anatomical-aware dual-branch cascaded deep neural network for segmentation of retinal layers and fluid from optical coherence tomography images. Comput. Medical Imaging Graph. 94 (2021)
Da Ma, Donghuan Lu, Karteek Popuri, Mirza Faisal Beg
Differential Diagnosis of Frontotemporal Dementia and Alzheimer's Disease using Generative Adversarial Network. CoRR (2021)
Julian Lo, Morgan Heisler, Vinicius Vanzan, Sonja Karst, Ivana Zadro Matovinovic, Sven Loncaric, Eduardo V. Navajas, Mirza Faisal Beg, Marinko V. Sarunic
Microvasculature Segmentation and Inter-capillary Area Quantification of the Deep Vascular Complex using Transfer Learning. CoRR (2020)
Da Ma, Donghuan Lu, Morgan Heisler, Setareh Dabiri, Sieun Lee, Gavin Weiguang Ding, Marinko V. Sarunic, Mirza Faisal Beg
Cascade Dual-branch Deep Neural Networks for Retinal Layer and fluid Segmentation of Optical Coherence Tomography Incorporating Relative Positional Map. MIDL (2020)
Da Ma, Manuel Jorge Cardoso, Maria A. Zuluaga, Marc Modat, Nick M. Powell, Frances K. Wiseman, Jon O. Cleary, Benjamin Sinclair, Ian F. Harrison, Bernard Siow, Karteek Popuri, Sieun Lee, Joanne A. Matsubara, Marinko V. Sarunic, Mirza Faisal Beg, Victor L. J. Tybulewicz, Elizabeth M. C. Fisher, Mark F. Lythgoe, Sébastien Ourselin
Substantially thinner internal granular layer and reduced molecular layer surface in the cerebellar cortex of the Tc1 mouse model of down syndrome - a comprehensive morphometric analysis with active staining contrast-enhanced MRI. NeuroImage 223 (2020)
Setareh Dabiri, Karteek Popuri, Cydney Ma, Vincent Chow, Elizabeth M. Cespedes Feliciano, Bette J. Caan, Vickie E. Baracos, Mirza Faisal Beg
Deep learning method for localization and segmentation of abdominal CT. Comput. Medical Imaging Graph. 85 (2020)
Hrvoje Bogunovic, Freerk G. Venhuizen, Sophie Klimscha, Stefanos Apostolopoulos, Alireza Bab-Hadiashar, Ulas Bagci, Mirza Faisal Beg, Loza Bekalo, Qiang Chen, Carlos Ciller, Karthik Gopinath, Amirali K. Gostar, Kiwan Jeon, Zexuan Ji, Sung Ho Kang, Dara D. Koozekanani, Donghuan Lu, Dustin Morley, Keshab K. Parhi, Hyoung Suk Park, Abdolreza Rashno, Marinko Sarunic, Saad Shaikh, Jayanthi Sivaswamy, Ruwan B. Tennakoon, Shivin Yadav, Sandro De Zanet, Sebastian M. Waldstein, Bianca S. Gerendas, Caroline Klaver, Clara I. Sánchez, Ursula Schmidt-Erfurth
RETOUCH: The Retinal OCT Fluid Detection and Segmentation Benchmark and Challenge. IEEE Trans. Medical Imaging 38 (8) (2019)
Donghuan Lu, Morgan Heisler, Da Ma, Setareh Dabiri, Sieun Lee, Gavin Weiguang Ding, Marinko V. Sarunic, Mirza Faisal Beg
Cascaded Deep Neural Networks for Retinal Layer Segmentation of Optical Coherence Tomography with Fluid Presence. CoRR (2019)
Morgan Heisler, Forson Chan, Zaid Mammo, Chandrakumar Balaratnasingam, Pavle Prentasic, Gavin Docherty, MyeongJin Ju, Sanjeeva Rajapakse, Sieun Lee, Andrew B. Merkur, Andrew W. Kirker, David A. Albiani, David Maberley, K. Bailey Freund, Mirza Faisal Beg, Sven Loncaric, Marinko V. Sarunic, Eduardo V. Navajas
Deep learning vessel segmentation and quantification of the foveal avascular zone using commercial and prototype OCT-A platforms. CoRR (2019)
Setareh Dabiri, Karteek Popuri, Elizabeth M. Cespedes Feliciano, Bette J. Caan, Vickie E. Baracos, Mirza Faisal Beg
Muscle segmentation in axial computed tomography (CT) images at the lumbar (L3) and thoracic (T4) levels for body composition analysis. Comput. Medical Imaging Graph. 75 (2019)
Donghuan Lu, Morgan Heisler, Sieun Lee, Gavin Weiguang Ding, Eduardo Navajas, Marinko V. Sarunic, Mirza Faisal Beg
Deep-learning based multiclass retinal fluid segmentation and detection in optical coherence tomography images using a fully convolutional neural network. Medical Image Anal. 54 (2019)
Donghuan Lu, Karteek Popuri, Gavin Weiguang Ding, Rakesh Balachandar, Mirza Faisal Beg
Multiscale deep neural network based analysis of FDG-PET images for the early diagnosis of Alzheimer's disease. Medical Image Anal. 46 (2018)
Sieun Lee, Nicolas Charon, Benjamin Charlier, Karteek Popuri, Evgeniy Lebed, Marinko V. Sarunic, Alain Trouvé, Mirza Faisal Beg
Atlas-based shape analysis and classification of retinal optical coherence tomography images using the functional shape (fshape) framework. Medical Image Anal. 35 (2017)
Amanmeet Garg, Donghuan Lu, Karteek Popuri, Mirza Faisal Beg
Topology of Surface Displacement Shape Feature in Subcortical Structures. GRAIL/MFCA/MICGen@MICCAI (2017)
Donghuan Lu, Karteek Popuri, Gavin Weiguang Ding, Rakesh Balachandar, Mirza Faisal Beg
Multimodal and Multiscale Deep Neural Networks for the Early Diagnosis of Alzheimer's Disease using structural MR and FDG-PET images. CoRR (2017)
Donghuan Lu, Gavin Weiguang Ding, Andrew B. Merkur, Marinko V. Sarunic, Mirza Faisal Beg
Multiple instance learning for age-related macular degeneration diagnosis in optical coherence tomography images. ISBI (2017)
Amanmeet Garg, Donghuan Lu, Karteek Popuri, Mirza Faisal Beg
Brain geometry persistent homology marker for Parkinson's disease. ISBI (2017)
Donghuan Lu, Morgan Heisler, Sieun Lee, Gavin Weiguang Ding, Marinko V. Sarunic, Mirza Faisal Beg
Retinal Fluid Segmentation and Detection in Optical Coherence Tomography Images using Fully Convolutional Neural Network. CoRR (2017)
Karteek Popuri, Rakesh Balachandar, Kathryn I. Alpert, Donghuan Lu, Mahadev Bhalla, Ian Mackenzie, Robin Ging-Yuek Hsiung, Lei Wang, Mirza Faisal Beg
Development and validation of a novel dementia of Alzheimer's type (DAT) score based on metabolism FDG-PET imaging. CoRR (2017)
Amanmeet Garg, Ruth E. Grunau, Karteek Popuri, Steven P. Miller, Bruce Bjornson, Kenneth J. Poskitt, Mirza Faisal Beg
Surface displacement based shape analysis of central brain structures in preterm-born children. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2016)
Sieun Lee, Evgeniy Lebed, Marinko V. Sarunic, Mirza Faisal Beg
Exact Surface Registration of Retinal Surfaces From 3-D Optical Coherence Tomography Images. IEEE Trans. Biomed. Eng. 62 (2) (2015)
Gavin Weiguang Ding, Eric Lin, Amanda Ribeiro, Marinko V. Sarunic, Glen F. Tibbits, Mirza Faisal Beg
Automatic Cycle Averaging for Denoising Approximately Periodic Spatiotemporal Signals. IEEE Trans. Medical Imaging 33 (8) (2014)
Gavin Weiguang Ding, Eric Lin, Amanda Ribeiro, Marinko V. Sarunic, Glen F. Tibbits, Mirza Faisal Beg
On identification of sinoatrial node in zebrafish heart based on functional time series from optical mapping. EMBC (2013)
Ali R. Khan, Lei Wang, Mirza Faisal Beg
Multistructure Large Deformation Diffeomorphic Brain Registration. IEEE Trans. Biomed. Eng. 60 (2) (2013)
Gavin Weiguang Ding, Mei Young, Serge Bourgault, Sieun Lee, David A. Albiani, Andrew W. Kirker, Farzin Forooghian, Marinko V. Sarunic, Andrew B. Merkur, Mirza Faisal Beg
Automatic detection of subretinal fluid and sub-retinal pigment epithelium fluid in optical coherence tomography images. EMBC (2013)
Pradeep Reddy Raamana, Lei Wang, Mirza Faisal Beg
Thickness NETwork (ThickNet) Features for the Detection of Prodromal AD. MLMI (2013)
Evgeniy Lebed, Claudia Jacova, Lei Wang, Mirza Faisal Beg
Novel Surface-Smoothing Based Local Gyrification Index. IEEE Trans. Medical Imaging 32 (4) (2013)
Andy Bo Wu, Evgeniy Lebed, Marinko Sarunic, Mirza Faisal Beg
Quantitative Evaluation of Transform Domains for Compressive Sampling-Based Recovery of Sparsely Sampled Volumetric OCT Images. IEEE Trans. Biomed. Eng. 60 (2) (2013)
Yue Cui, Wei Wen, Darren M. Lipnicki, Mirza Faisal Beg, Jesse S. Jin, Suhuai Luo, Wanlin Zhu, Nicole A. Kochan, Simone Reppermund, Lin Zhuang, Pradeep Reddy Raamana, Tao Liu, Julian N. Trollor, Lei Wang, Henry Brodaty, Perminder S. Sachdev
Automated detection of amnestic mild cognitive impairment in community-dwelling elderly adults: A combined spatial atrophy and white matter alteration approach. NeuroImage 59 (2) (2012)
Ali R. Khan, Nicolas Cherbuin, Wei Wen, Kaarin Anstey, Perminder S. Sachdev, Mirza Faisal Beg
Optimal weights for local multi-atlas fusion using supervised learning and dynamic information (SuperDyn): Validation on hippocampus segmentation. NeuroImage 56 (1) (2011)
Jingyun Chen, Ali R. Khan, Martin J. McKeown, Mirza Faisal Beg
Momentum-based morphometric analysis with application to Parkinson's disease. Medical Imaging: Image-Guided Procedures (2011)
Elvan Ceyhan, Mirza Faisal Beg, Can Ceritoglu, Lei Wang, John C. Morris, John G. Csernansky, Michael I. Miller, J. Tilak Ratnanather
Quantization and analysis of hippocampal morphometric changes due to dementia of Alzheimer type using metric distances based on large deformation diffeomorphic metric mapping. Comput. Medical Imaging Graph. 35 (4) (2011)
Jing Wan, Sungeun Kim, Mark Inlow, Kwangsik Nho, Shanker Swaminathan, Shannon L. Risacher, Shiaofen Fang, Michael W. Weiner, Mirza Faisal Beg, Lei Wang, Andrew J. Saykin, Li Shen
Hippocampal Surface Mapping of Genetic Risk Factors in AD via Sparse Learning Models. MICCAI (2) (2011)
Eli Gibson, Mei Young, Marinko Sarunic, Mirza Faisal Beg
Optic Nerve Head Registration Via Hemispherical Surface and Volume Registration. IEEE Trans. Biomed. Eng. 57 (10) (2010)
Mirza Faisal Beg, Stephen Wong, Ali R. Khan, Teresa Cheung, Naznin Virji-Babul, Anthony Herdman
External landmark and head-shape-based functional data normalization. Comput. Medical Imaging Graph. 33 (7) (2009)
Eli Gibson, Ali R. Khan, Mirza Faisal Beg
A Combined Surface And VOlumetric Registration (SAVOR) Framework to Study Cortical Biomarkers and Volumetric Imaging Data. MICCAI (1) (2009)
Jingyun Chen, Samantha J. Palmer, Ali R. Khan, Martin J. McKeown, Mirza Faisal Beg
Freesurfer-initialized large deformation diffeomorphic metric mapping with application to Parkinson's disease. Medical Imaging: Image Processing (2009)
Ali R. Khan, Moo K. Chung, Mirza Faisal Beg
Robust Atlas-Based Brain Segmentation Using Multi-structure Confidence-Weighted Registration. MICCAI (1) (2009)
Ali R. Khan, Mirza Faisal Beg
Representation of time-varying shapes in the large deformation diffeomorphic framework. ISBI (2008)
Ryan Dickie, Mirza Faisal Beg
Two novel methods for computing the 3D cardiac midwall. ISBI (2008)
Ali R. Khan, Lei Wang, Mirza Faisal Beg
FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping. NeuroImage 41 (3) (2008)
Mirza Faisal Beg, Ryan Dickie, Gregory Golds, Laurent Younes
Consistent realignment of 3D diffusion tensor MRI eigenvectors. Medical Imaging: Image Processing (2007)
Mirza Faisal Beg, Ali R. Khan
Symmetric Data Attachment Terms for Large Deformation Image Registration. IEEE Trans. Medical Imaging 26 (9) (2007)
Lei Wang, Mirza Faisal Beg, J. Tilak Ratnanather, Can Ceritoglu, Laurent Younes, John C. Morris, John G. Csernansky, Michael I. Miller
Large Deformation Diffeomorphism and Momentum Based Hippocampal Shape Discrimination in Dementia of the Alzheimer type. IEEE Trans. Medical Imaging 26 (4) (2007)
Mirza Faisal Beg, Ali R. Khan
Computing an average anatomical atlas using LDDMM and geodesic shooting. ISBI (2006)
Jorge Jovicich, Mirza Faisal Beg, Steve Pieper, Carey E. Priebe, Michael I. Miller, Randy L. Buckner, Bruce R. Rosen
Biomedical Informatics Research Network: Integrating Multi-Site Neuroimaging Data Acquisition, Data Sharing and Brain Morphometric Processing. CBMS (2005)
Ali R. Khan, Elizabeth H. Aylward, Patrick Barta, Michael I. Miller, Mirza Faisal Beg
Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping. MICCAI (2005)
Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms. Int. J. Comput. Vis. 61 (2) (2005)
Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
The Euler-Lagrange Equation for Interpolating Sequence of Landmark Datasets. MICCAI (2) (2003)
Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
Computational anatomy: computing metrics on anatomical shapes. ISBI (2002)