Guoqiang Yu

ORCID

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 37

Top Venues

Virginia Tech, Blacksburg, VA, USA (PHD)

Education History

Virginia Tech, Blacksburg, VA, USA

PHD

Publications

Chiung-Ting Wu, Dongping Du, Lulu Chen, Rujia Dai, Chunyu Liu, Guoqiang Yu, Saurabh Bhardwaj, Sarah J. Parker, Zhen Zhang, Robert Clarke, David M. Herrington, Yue Wang
CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution. Bioinform. 40 (3) (2024)
Guoqiang Yu, Xudong Zhou
Improving Nighttime Semantic Segmentation with Dual-Domain Mixed Attention and Shallow Feature Enhancement. CCIS (2023)
Md. Selim, Jie Zhang, Faraneh Fathi, Michael A. Brooks, Ge Wang, Guoqiang Yu, Jin Chen
Latent Diffusion Model for Medical Image Standardization and Enhancement. CoRR (2023)
Xuhui Liu, Daniel A. Irwin, Chong Huang, Yutong Gu, Li Chen, Kevin D. Donohue, Lei Chen, Guoqiang Yu
A Wearable Fiber-Free Optical Sensor for Continuous Monitoring of Cerebral Blood Flow in Freely Behaving Mice. IEEE Trans. Biomed. Eng. 70 (6) (2023)
Wei Zheng, Cheng Peng, Zeyuan Hou, Boyu Lyu, Mengfan Wang, Xuelong Mi, Shuoxuan Qiao, Yinan Wan, Guoqiang Yu
NIS3D: A Completely Annotated Benchmark for Dense 3D Nuclei Image Segmentation. NeurIPS (2023)
Yuting Liu, Albert Lee, Kun Qian, Peng Zhang, Haoran He, Zheyu Ren, Shun Kong Cheung, Yaoyin Li, Xu Zhang, Zichao Ma, Zhihua Xiao, Guoqiang Yu, Xin Wang, Junwei Liu, Zhongrui Wang, Kang L. Wang, Qiming Shao
Cryogenic in-memory computing using tunable chiral edge states. CoRR (2022)
Congchao Wang, Yizhi Wang, Guoqiang Yu
Efficient Global MOT Under Minimum-Cost Circulation Framework. IEEE Trans. Pattern Anal. Mach. Intell. 44 (4) (2022)
Huai Lin, Nuo Xu, Di Wang, Long Liu, Xuefeng Zhao, Yongjian Zhou, Xuming Luo, Cheng Song, Guoqiang Yu, Guozhong Xing
Implementation of Highly Reliable and Energy-Efficient Nonvolatile In-Memory Computing using Multistate Domain Wall Spin-Orbit Torque Device. Adv. Intell. Syst. 4 (9) (2022)
Zuolin Cheng, Songtao Wei, Guoqiang Yu
A Single-Cell-Resolution Quantitative Metric of Similarity to a Target Cell Type for scRNA-seq Data. BIBM (2022)
Xuelong Mi, Mengfan Wang, Alex Chen, Jing-Xuan Lim, Yizhi Wang, Misha B. Ahrens, Guoqiang Yu
BILCO: An Efficient Algorithm for Joint Alignment of Time Series. NeurIPS (2022)
Mengfan Wang, Kathleen Whiting, Fritz W. Lischka, Zygmunt Galdzicki, Guoqiang Yu
An Unsupervised Approach to Detect Microglia Tip in Volumetric Fluorescence Imaging Data. ISBI (2022)
Huai Lin, Nuo Xu, Di Wang, Long Liu, Xuefeng Zhao, Yongjian Zhou, Xuming Luo, Cheng Song, Guoqiang Yu, Guozhong Xing
Implementation of Highly Reliable and Energy-Efficient Nonvolatile In-Memory Computing using Multistate Domain Wall Spin-Orbit Torque Device. Adv. Intell. Syst. 4 (9) (2022)
Lulu Chen, Chiung-Ting Wu, Chia-Hsiang Lin, Rujia Dai, Chunyu Liu, Robert Clarke, Guoqiang Yu, Jennifer E. Van Eyk, David M. Herrington, Yue Wang
swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution. Bioinform. 38 (5) (2022)
Mengfan Wang, Boyu Lyu, Guoqiang Yu
ConvexVST: A Convex Optimization Approach to Variance-stabilizing Transformation. ICML (2021)
Chiung-Ting Wu, Yizhi Wang, Yinxue Wang, Timothy M. D. Ebbels, Ibrahim Karaman, Gonçalo Graça, Rui Pinto, David M. Herrington, Yue Wang, Guoqiang Yu
Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection. Bioinform. 36 (9) (2020)
Yizhi Wang, Congchao Wang, Petter Ranefall, Gerard Broussard, Yinxue Wang, Guilai Shi, Boyu Lyu, Chiung-Ting Wu, Yue Wang, Lin Tian, Guoqiang Yu
SynQuant: an automatic tool to quantify synapses from microscopy images. Bioinform. 36 (5) (2020)
Congchao Wang, Yizhi Wang, Guoqiang Yu
Efficient Global Multi-object Tracking Under Minimum-cost Circulation Framework. CoRR (2019)
Congchao Wang, Yizhi Wang, Yinxue Wang, Chiung-Ting Wu, Guoqiang Yu
muSSP: Efficient Min-cost Flow Algorithm for Multi-object Tracking. NeurIPS (2019)
Chong Huang, Siavash Mazdeyasna, Li Chen, Elie G. Abu Jawdeh, Henrietta S. Bada, Kathryn Saatman, Lei Chen, Guoqiang Yu
Noninvasive noncontact speckle contrast diffuse correlation tomography of cerebral blood flow in rats. NeuroImage 198 (2019)
Jun Ruan, Zhen Liu, Ming Sun, Yue Wang, Junqiu Yue, Guoqiang Yu
DBS: a fast and informative segmentation algorithm for DNA copy number analysis. BMC Bioinform. 20 (1) (2019)
Yinxue Wang, Maria Ali, Yue Joseph Wang, Sarah Kucenas, Guoqiang Yu
Detection and tracking of migrating oligodendrocyte progenitor cells from in vivo fluorescence time-lapse imaging data. ISBI (2018)
Siavash Mazdeyasna, Chong Huang, Mingjun Zhao, Alisha R. Bonaroti, Kathryn Saatman, Lei Chen, Elie G. Abu Jawdeh, Henrietta S. Bada, Brandon A. Miller, Lesley Wong, Guoqiang Yu
Noninvasive Noncontact 3D Optical Imaging of Blood Flow Distributions in Animals and Humans. ISSPIT (2018)
Siavash Mazdeyasna, Chong Huang, Mingjun Zhao, Alisha R. Bonaroti, Kathryn Saatman, Lei Chen, Elie G. Abu Jawdeh, Henrietta S. Bada, Brandon A. Miller, Lesley Wong, Guoqiang Yu
Noninvasive Noncontact 3D Optical Imaging of Blood Flow Distributions in Animals and Humans. ISSPIT (2018)
Qiming Shao, Guoqiang Yu, Lei Pan, Xiaoyu Che, Yabin Fan, Koichi Murata, Qing-Lin He, Tianxiao Nie, Xufeng Kou, Kang L. Wang
Large Room Temperature Charge-to-Spin Conversion Efficiency in Topological Insulator/CoFeB bilayers. DRC (2018)
Chong Huang, Daniel Irwin, Mingjun Zhao, Yu Shang, Nneamaka Agochukwu, Lesley Wong, Guoqiang Yu
Noncontact 3-D Speckle Contrast Diffuse Correlation Tomography of Tissue Blood Flow Distribution. IEEE Trans. Medical Imaging 36 (10) (2017)
Yiming Zuo, Yi Cui, Guoqiang Yu, Ruijiang Li, Habtom W. Ressom
Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO. BMC Bioinform. 18 (1) (2017)
Chase Haddix, Ahmed A. Bahrani, Aleksandra Kawala-Janik, Walter G. Besio, Guoqiang Yu, Sridhar Sunderam
Trial measurement of movement-related cortical dynamics using electroencephalography and diffuse correlation spectroscopy. MMAR (2017)
Yinxue Wang, Guilai Shi, David J. Miller, Yizhi Wang, Congchao Wang, Gerard Broussard, Yue Wang, Lin Tian, Guoqiang Yu
Automated Functional Analysis of Astrocytes from Chronic Time-Lapse Calcium Imaging Data. Frontiers Neuroinformatics 11 (2017)
Yizhi Wang, David J. Miller, Kira Poskanzer, Yue Wang, Lin Tian, Guoqiang Yu
Graphical Time Warping for Joint Alignment of Multiple Curves. NIPS (2016)
Ibrahim Youssef, Robert Clarke, Ie-Ming Shih, Yue Joseph Wang, Guoqiang Yu
Biologically inspired survival analysis based on integrating gene expression as mediator with genomic variants. Comput. Biol. Medicine 77 (2016)
Yinxue Wang, Guilai Shi, David J. Miller, Yizhi Wang, Gerard Broussard, Yue Wang, Lin Tian, Guoqiang Yu
FASP: A machine learning approach to functional astrocyte phenotyping from time-lapse calcium imaging data. ISBI (2016)
Kang L. Wang, Xufeng Kou, Pramey Upadhyaya, Yabin Fan, Qiming Shao, Guoqiang Yu, Pedram Khalili Amiri
Electric-Field Control of Spin-Orbit Interaction for Low-Power Spintronics. Proc. IEEE 104 (10) (2016)
Minkun Wang, Cristina Di Poto, Alessia Ferrarini, Guoqiang Yu, Habtom W. Ressom
Metabolomic data deconvolution using probabilistic purification models. BIBM (2016)
Minkun Wang, Guoqiang Yu, Habtom W. Ressom
Integrative Analysis of Proteomic, Glycomic, and Metabolomic Data for Biomarker Discovery. IEEE J. Biomed. Health Informatics 20 (5) (2016)
Minkun Wang, Tsung-Heng Tsai, Guoqiang Yu, Habtom W. Ressom
Purification of LC/GC-MS based biomolecular expression profiles using a topic model. BIBM (2015)
Yiming Zuo, Guoqiang Yu, Habtom W. Ressom
Integrating prior biological knowledge and graphical LASSO for network inference. BIBM (2015)
Minkun Wang, Guoqiang Yu, Habtom W. Ressom
Integrative analysis of LC-MS based glycomic and proteomic data. EMBC (2015)
Ye Tian, Bai Zhang, Yi Fu, Guoqiang Yu, Yue Wang
A statistical approach to identifying significant transgenerational methylation changes. GlobalSIP (2014)
Bai Zhang, Xuchu Hou, Xiguo Yuan, Ie-Ming Shih, Zhen Zhang, Robert Clarke, Roger R. Wang, Yi Fu, Subha Madhavan, Yue Joseph Wang, Guoqiang Yu
AISAIC: a software suite for accurate identification of significant aberrations in cancers. Bioinform. 30 (3) (2014)
Ibrahim Mohamed Ibrahim, Guoqiang Yu, Li Chen, Yue Wang
Enhancing the convex analysis of mixtures technique for estimating DCE-MRI pharmacokinetic parameters. EMBC (2014)
Yiming Zuo, Guoqiang Yu, Chi Zhang, Habtom W. Ressom
A new approach for multi-omic data integration. BIBM (2014)
Ye Tian, Sean S. Wang, Zhen Zhang, Olga C. Rodriguez, Emanuel Petricoin III, Ie-Ming Shih, Daniel Chan, Maria Avantaggiati, Guoqiang Yu, Shaozhen Ye, Robert Clarke, Chao Wang, Bai Zhang, Yue Joseph Wang, Chris Albanese
Integration of Network Biology and Imaging to Study Cancer Phenotypes and Responses. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (6) (2014)
Guoqiang Yu, Niya Wang, Roger R. Wang, Sean S. Wang, Yue Wang
A feasible roadmap to identifying significant intercellular genomic heterogeneity in deep sequencing data. GlobalSIP (2014)
Yinxue Wang, Luca Bello, Yue Wang, Craig M. McDonald, Eric P. Hoffman, Guoqiang Yu
Predicting age at loss of ambulation in Duchenne muscular dystrophy with deep phenotypic measures. GlobalSIP (2014)
Minkun Wang, Guoqiang Yu, Yehia Mechref, Habtom W. Ressom
GPA: An algorithm for LC/MS based glycan profile annotation. BIBM (2013)
Lixin Dong, Lian He, Yu Lin, Yu Shang, Guoqiang Yu
Simultaneously Extracting Multiple Parameters via Fitting One Single Autocorrelation Function Curve in Diffuse Correlation Spectroscopy. IEEE Trans. Biomed. Eng. 60 (2) (2013)
Yiming Zuo, Guoqiang Yu, Mahlet G. Tadesse, Habtom W. Ressom
Reconstructing biological networks using low order partial correlation. BIBM (2013)
Mohammed Elhenawy, Xuchu Hou, Guoqiang Yu
A non-parametric approach for estimating stromal contamination in cancer samples. GENSiPS (2012)
Ran Cheng, Yu Shang, Don Hayes Jr., Sibu P. Saha, Guoqiang Yu
Noninvasive optical evaluation of spontaneous low frequency oscillations in cerebral hemodynamics. NeuroImage 62 (3) (2012)
Mohammed Elhenawy, Guoqiang Yu
NMF based approach for finding recurrent aberrations in DNA copy number data. GENSiPS (2012)
Xuchu Hou, Guoqiang Yu, Xiguo Yuan, Bai Zhang, Ie-Ming Shih, Zhen Zhang, Robert Clarke, Subha Madhavan
Accurate identification of significant aberrations in contaminated cancer genome. GENSiPS (2012)
Guoqiang Yu, Bai Zhang, G. Steven Bova, Jianfeng Xu, Ie-Ming Shih, Yue Joseph Wang
detection of genomic deletion types and correction of normal cell contamination in copy number data. Bioinform. 27 (11) (2011)
Guoqiang Yu, Huai Li, Sook S. Ha, Ie-Ming Shih, Robert Clarke, Eric P. Hoffman, Subha Madhavan, Jianhua Xuan, Yue Joseph Wang
analytical tool for multiclass gene selection and predictive classification. Bioinform. 27 (5) (2011)
Yuanjian Feng, Guoqiang Yu, Tian-Li Wang, Ie-Ming Shih, Yue Joseph Wang
Analysing DNA copy number changes using Fused Margin Regression. Int. J. Funct. Informatics Pers. Medicine 3 (1) (2010)
Guoqiang Yu, Yuanjian Feng, David J. Miller, Jianhua Xuan, Eric P. Hoffman, Robert Clarke, Ben Davidson, Ie-Ming Shih, Yue Joseph Wang
Matched Gene Selection and Committee Classifier for Molecular Classification of Heterogeneous Diseases. J. Mach. Learn. Res. 11 (2010)
David J. Miller, Yanxin Zhang, Guoqiang Yu, Yongmei Liu, Li Chen, Carl D. Langefeld, David M. Herrington, Yue Joseph Wang
An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions. Bioinform. 25 (19) (2009)
Yuanjian Feng, Guoqiang Yu, Tian-Li Wang, Ie-Ming Shih, Yue Joseph Wang
Analyzing DNA Copy Number Changes Using Fused Margin Regression. BIBM (2009)
Guoqiang Yu, Bai Zhang, Jianfeng Xu, Ie-Ming Shih, Yue Joseph Wang
Accurate Estimation of Genomic Deletions and Normal Cell Contamination by Bayesian Analysis of Mixtures. BIBM (2009)
Guoqiang Yu, Jin Zhang, Li Zhang, Zhiqiang Chen, Yuanjing Li
Combining Iterative Inverse Filter with Shock Filter for Baggage Inspection Image Deblurring. ACCV (2) (2006)
Jianwei Gu, Li Zhang, Guoqiang Yu, Yuxiang Xing, Zhiqiang Chen
Metal artifacts reduction in CT images through Euler's elastica and curvature based sinogram inpainting. Medical Imaging: Image Processing (2006)
Shiliang Sun, Changshui Zhang, Guoqiang Yu
A bayesian network approach to traffic flow forecasting. IEEE Trans. Intell. Transp. Syst. 7 (1) (2006)
Guoqiang Yu, Liang Li, Jianwei Gu, Li Zhang
Total Variation Based Iterative Image Reconstruction. CVBIA (2005)
Guoqiang Yu, Changshui Zhang
Switching ARIMA model based forecasting for traffic flow. ICASSP (2) (2004)
Shiliang Sun, Changshui Zhang, Guoqiang Yu, Naijiang Lu, Fei Xiao
Bayesian Network Methods for Traffic Flow Forecasting with Incomplete Data. ECML (2004)
Changshui Zhang, Shiliang Sun, Guoqiang Yu
Short-Term Traffic Flow Forecasting Using Expanded Bayesian Network for Incomplete Data. ISNN (2) (2004)
Jianming Hu, Jingyan Song, Guoqiang Yu, Yi Zhang
A novel networked traffic parameter forecasting method based on Markov chain model. SMC (2003)

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Publication Activity (10 Years)

Top Topics

Top Venues

Guoqiang Yu