Szymon M. Kielbasa

Publication Activity (10 Years)

Years Active: 2000-2019
Publications (10 Years): 2

Top Topics

Grand Challenges

User Friendly Interface

Top Venues

Publications

David Laehnemann, Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos, Niko Beerenwinkel, Kieran R. Campbell, Ahmed Mahfouz, Luca Pinello, Pavel Skums, Alexandros Stamatakis, Camille Stephan-Otto Attolini, Samuel Aparicio, Jasmijn A. Baaijens, Marleen Balvert, Buys de Barbanson, Antonio Cappuccio, Giacomo Corleone, Bas E. Dutilh, Maria Florescu, Victor Guryev, Rens Holmer, Katharina Jahn, Thamar Jessurun Lobo, Emma M. Keizer, Indu Khatri, Szymon M. Kielbasa, Jan O. Korbel, Alexey M. Kozlov, Tzu-Hao Kuo, Boudewijn P. F. Lelieveldt, Ion I. Mandoiu, John C. Marioni, Tobias Marschall, Felix Mölder, Amir Niknejad, Lukasz Raczkowski, Marcel J. T. Reinders, Jeroen de Ridder, Antoine-Emmanuel Saliba, Antonios Somarakis, Oliver Stegle, Fabian J. Theis, Huan Yang, Alex Zelikovsky, Alice C. McHardy, Benjamin J. Raphael, Sohrab P. Shah, Alexander Schönhuth
12 Grand Challenges in Single-Cell Data Science. PeerJ Prepr. 7 (2019)
Peter van't Hof, Szymon M. Kielbasa, Wibowo Arindrarto, Jeroen F. J. Laros, Sander Bollen, Hailiang Mei
BIOPET: towards Scalable, Maintainable, User-friendly, Robust and Flexible NGS data analysis pipelines. CCGrid (2017)
Szymon M. Kielbasa, Holger Klein, Helge G. Roider, Martin Vingron, Nils Blüthgen
TransFind - predicting transcriptional regulators for gene sets. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Szymon M. Kielbasa, Nils Blüthgen, Michael Fähling, Ralf Mrowka
Targetfinder.org: a resource for systematic discovery of transcription factor target genes. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier
HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res. 33 (Database-Issue) (2005)
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
Measuring similarities between transcription factor binding sites. BMC Bioinform. 6 (2005)
Zhenjun Hu, Yutao Fu, Anason S. Halees, Szymon M. Kielbasa, Zhiping Weng
SeqVISTA: a new module of integrated computational tools for studying transcriptional regulation. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel
HOMGL - comparing genelists across species and with different accession numbers. Bioinform. 20 (1) (2004)
Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics (2004)
Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel
Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics (2003)
E. W. Wolski, Christoph K. Wierling, Thomas Kreitler, Szymon M. Kielbasa, U. Schneider, Johan Gobom, Hans Lehrach, Holger Eickhoff
Visualization and analysis of gene expression data using freeware and GPL-Software. German Conference on Bioinformatics (2001)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Combining frequency and positional information to predict transcription factor binding sites. Bioinform. 17 (11) (2001)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics (2000)