Hanspeter Herzel

Publication Activity (10 Years)

Years Active: 1991-2019
Publications (10 Years): 4

Top Topics

High Throughput

Biological Systems

Top Venues

PLoS Comput. Biol.

BMC Syst. Biol.

Publications

Christoph Schmal, Daisuke Ono, Jihwan Myung, J. Patrick Pett, Sato Honma, Ken-ichi Honma, Hanspeter Herzel, Isao T. Tokuda
Weak coupling between intracellular feedback loops explains dissociation of clock gene dynamics. PLoS Comput. Biol. 15 (9) (2019)
Isao T. Tokuda, Daisuke Ono, Sato Honma, Ken-ichi Honma, Hanspeter Herzel
Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors. PLoS Comput. Biol. 14 (12) (2018)
Christoph Schmal, Jihwan Myung, Hanspeter Herzel, Grigory V. Bordyugov
Moran's I quantifies spatio-temporal pattern formation in neural imaging data. Bioinform. 33 (19) (2017)
J. Patrick Pett, Anja Korencic, Felix Wesener, Achim Kramer, Hanspeter Herzel
Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator. PLoS Comput. Biol. 12 (12) (2016)
Anuprabha Bhargava, Hanspeter Herzel, Bharath Ananthasubramaniam
Mining for novel candidate clock genes in the circadian regulatory network. BMC Syst. Biol. 9 (2015)
Willi Gottstein, Stefan Müller, Hanspeter Herzel, Ralf Steuer
Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution. Biosyst. 117 (2014)
Bharath Ananthasubramaniam, Erik D. Herzog, Hanspeter Herzel
Timing of Neuropeptide Coupling Determines Synchrony and Entrainment in the Mammalian Circadian Clock. PLoS Comput. Biol. 10 (4) (2014)
Angela Relógio, Pål O. Westermark, Thomas Wallach, Katja Schellenberg, Achim Kramer, Hanspeter Herzel
Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops. PLoS Comput. Biol. 7 (12) (2011)
Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel
Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules. PLoS Comput. Biol. 6 (3) (2010)
Pål O. Westermark, David K. Welsh, Hitoshi Okamura, Hanspeter Herzel
Quantification of Circadian Rhythms in Single Cells. PLoS Comput. Biol. 5 (11) (2009)
Matthias E. Futschik, Hanspeter Herzel
Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinform. 24 (8) (2008)
James C. W. Locke, Pål O. Westermark, Achim Kramer, Hanspeter Herzel
Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst. Biol. 2 (2008)
Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik
Flexible web-based integration of distributed large-scale human protein interaction maps. J. Integr. Bioinform. 4 (1) (2007)
Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik
UniHI: an entry gate to the human protein interactome. Nucleic Acids Res. 35 (Database-Issue) (2007)
Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer
Synchronization-Induced Rhythmicity of Circadian Oscillators in the Suprachiasmatic Nucleus. PLoS Comput. Biol. 3 (4) (2007)
Matthias E. Futschik, Gautam Chaurasia, Anna Tschaut, Jenny Russ, M. Madan Babu, Hanspeter Herzel
Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network . J. Integr. Bioinform. 4 (3) (2007)
Matthias E. Futschik, Gautam Chaurasia, Hanspeter Herzel
Comparison of human protein-protein interaction maps. Bioinform. 23 (5) (2007)
Matthias E. Futschik, Hanspeter Herzel
Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models. German Conference on Bioinformatics (2007)
Matthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel
Comparison of Human Protein-Protein Interaction Maps. German Conference on Bioinformatics (2006)
Lokesh Kumar, Matthias E. Futschik, Hanspeter Herzel
DNA Motifs and Sequence Periodicities. Silico Biol. 6 (1-2) (2006)
Stefan Legewie, Nils Blüthgen, Hanspeter Herzel
Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. PLoS Comput. Biol. 2 (9) (2006)
Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier
HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res. 33 (Database-Issue) (2005)
Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel
Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction. PLoS Comput. Biol. 1 (5) (2005)
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
Measuring similarities between transcription factor binding sites. BMC Bioinform. 6 (2005)
Riccardo Zaccarelli, Coen Elemans, W. Tecumseh Fitch, Hanspeter Herzel
Two-mass models of the bird syrinx. MAVEBA (2005)
Maciej Swat, Alexander E. Kel, Hanspeter Herzel
Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinform. 20 (10) (2004)
Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel
HOMGL - comparing genelists across species and with different accession numbers. Bioinform. 20 (1) (2004)
Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics (2004)
Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel
Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics (2003)
Olaf Weiss, Andreas Ziehe, Hanspeter Herzel
Optimizing Property Codes in Protein Data Reveals Structural Characteristics. ICANN (2003)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Combining frequency and positional information to predict transcription factor binding sites. Bioinform. 17 (11) (2001)
Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel
Peptide Binding Landscapes. German Conference on Bioinformatics (2000)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics (2000)
Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel
Reliability of Microarray Data and Clustering. German Conference on Bioinformatics (2000)
Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov
10-11 bp periodicities in complete genomes reflect protein structure and DNA folding. Bioinform. 15 (3) (1999)
Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel
Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics (1999)
Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov
Sequence Periodicities in Complete Genomes Reflect Supercoiling. German Conference on Bioinformatics (1998)
Olaf Weiss, Hanspeter Herzel
Property Codes in Sets of Protein Sequences. German Conference on Bioinformatics (1998)
Patrick Mergell, Hanspeter Herzel
Modelling biphonation - The role of the vocal tract. Speech Commun. 22 (2-3) (1997)
Hanspeter Herzel, J. Wendler
Evidence of chaos in phonatory samples. EUROSPEECH (1991)