Nils Blüthgen

Publication Activity (10 Years)

Years Active: 2004-2021
Publications (10 Years): 7

Top Topics

Mixed Integer Programming

Logical Inference

Drosophila Melanogaster

Experimental Designs

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Mathurin Dorel, Bertram Klinger, Tommaso Mari, Joern Toedling, Eric Blanc, Clemens Messerschmidt, Michal Nadler-Holly, Matthias Ziehm, Anja Sieber, Falk Hertwig, Dieter Beule, Angelika Eggert, Johannes H. Schulte, Matthias Selbach, Nils Blüthgen
Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance. PLoS Comput. Biol. 17 (11) (2021)
Mattias Rydenfelt, Bertram Klinger, Martina Klünemann, Nils Blüthgen
SPEED2: inferring upstream pathway activity from differential gene expression. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Torsten Gross, Nils Blüthgen
Identifiability and experimental design in perturbation studies. Bioinform. 36 (Supplement-1) (2020)
Torsten Gross, Matthew Wongchenko, Yibing Yan, Nils Blüthgen
Robust network inference using response logic. Bioinform. 35 (14) (2019)
Evert Bosdriesz, Anirudh Prahallad, Bertram Klinger, Anja Sieber, Astrid Bosma, René Bernards, Nils Blüthgen, Lodewyk F. A. Wessels
Comparative Network Reconstruction using mixed integer programming. Bioinform. 34 (17) (2018)
Mathurin Dorel, Bertram Klinger, Torsten Gross, Anja Sieber, Anirudh Prahallad, Evert Bosdriesz, Lodewyk F. A. Wessels, Nils Blüthgen
Modelling signalling networks from perturbation data. Bioinform. 34 (23) (2018)
Torsten Gross, Nils Blüthgen
Sorting sums of binary decision summands. CoRR (2017)
Franziska Witzel, Raphaela Fritsche-Guenther, Nadine Lehmann, Anja Sieber, Nils Blüthgen
Analysis of impedance-based cellular growth assays. Bioinform. 31 (16) (2015)
Philippe Thomas, Pawel Durek, Illés Solt, Bertram Klinger, Franziska Witzel, Pascal Schulthess, Yvonne Mayer, Domonkos Tikk, Nils Blüthgen, Ulf Leser
Computer-assisted curation of a human regulatory core network from the biological literature. Bioinform. 31 (8) (2015)
Szymon M. Kielbasa, Holger Klein, Helge G. Roider, Martin Vingron, Nils Blüthgen
TransFind - predicting transcriptional regulators for gene sets. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Jignesh R. Parikh, Bertram Klinger, Yu Xia, Jarrod A. Marto, Nils Blüthgen
Discovering causal signaling pathways through gene-expression patterns. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Szymon M. Kielbasa, Nils Blüthgen, Michael Fähling, Ralf Mrowka
Targetfinder.org: a resource for systematic discovery of transcription factor target genes. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Frank J. Bruggeman, Nils Blüthgen, Hans V. Westerhoff
Noise Management by Molecular Networks. PLoS Comput. Biol. 5 (9) (2009)
Stefan Legewie, Nils Blüthgen, Hanspeter Herzel
Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. PLoS Comput. Biol. 2 (9) (2006)
Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel
Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction. PLoS Comput. Biol. 1 (5) (2005)
Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel
HOMGL - comparing genelists across species and with different accession numbers. Bioinform. 20 (1) (2004)
Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics (2004)