Dieter Beule

Publication Activity (10 Years)

Years Active: 1998-2022
Publications (10 Years): 10

Top Topics

Colorectal Cancer

File Management

Signature Recognition

Top Venues

J. Open Source Softw.

Publications

Vinzenz May, Leonard Koch, Björn Fischer-Zirnsak, Denise Horn, Petra Gehle, Uwe Kornak, Dieter Beule, Manuel Holtgrewe
ClearCNV: CNV calling from NGS panel data in the presence of ambiguity and noise. Bioinform. 38 (16) (2022)
Mathurin Dorel, Bertram Klinger, Tommaso Mari, Joern Toedling, Eric Blanc, Clemens Messerschmidt, Michal Nadler-Holly, Matthias Ziehm, Anja Sieber, Falk Hertwig, Dieter Beule, Angelika Eggert, Johannes H. Schulte, Matthias Selbach, Nils Blüthgen
Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance. PLoS Comput. Biol. 17 (11) (2021)
Christopher Schiefer, Marc Bux, Jörgen Brandt, Clemens Messerschmidt, Knut Reinert, Dieter Beule, Ulf Leser
Portability of Scientific Workflows in NGS Data Analysis: A Case Study. CoRR (2020)
Mikko Nieminen, Oliver Stolpe, Franziska Schumann, Manuel Holtgrewe, Dieter Beule
SODAR Core: a Django-based framework for scientific data management and analysis web apps. J. Open Source Softw. 5 (55) (2020)
Manuel Holtgrewe, Oliver Stolpe, Mikko Nieminen, Stefan Mundlos, Alexej Knaus, Uwe Kornak, Dominik Seelow, Lara Segebrecht, Malte Spielmann, Björn Fischer-Zirnsak, Felix Boschann, Ute Scholl, Nadja Ehmke, Dieter Beule
VarFish: comprehensive DNA variant analysis for diagnostics and research. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Manuel Holtgrewe, Clemens Messerschmidt, Mikko Nieminen, Dieter Beule
DigestiFlow: from BCL to FASTQ with ease. Bioinform. 36 (6) (2020)
Franziska Schumann, Eric Blanc, Clemens Messerschmidt, Thomas Blankenstein, Antonia Busse, Dieter Beule
SigsPack, a package for cancer mutational signatures. BMC Bioinform. 20 (1) (2019)
Mathias Kuhring, Mikko Nieminen, Jennifer Kirwan, Dieter Beule, Manuel Holtgrewe
AltamISA: a Python API for ISA-Tab files. J. Open Source Softw. 4 (40) (2019)
Clemens Messerschmidt, Manuel Holtgrewe, Dieter Beule
HLA-MA: simple yet powerful matching of samples using HLA typing results. Bioinform. 33 (14) (2017)
Manuel Holtgrewe, Dieter Beule
VCFPy: a Python 3 library with good support for both reading and writing VCF. J. Open Source Softw. 1 (6) (2016)
Chris Bauer, Frank Kleinjung, Celia J. Smith, Mark W. Towers, Ali Tiss, Alexandra Chadt, Tanja Dreja, Dieter Beule, Hadi Al-Hasani, Knut Reinert, Johannes Schuchhardt, Rainer Cramer
Biomarker Discovery and Redundancy Reduction towards Classification using a Multi-factorial MALDI-TOF MS T2DM Mouse Model Dataset. BMC Bioinform. 12 (2011)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Combining frequency and positional information to predict transcription factor binding sites. Bioinform. 17 (11) (2001)
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics (2000)
Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel
Reliability of Microarray Data and Clustering. German Conference on Bioinformatics (2000)
Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel
Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics (1999)
Burkhard Militzer, Michele Zamparelli, Dieter Beule
Evolutionary search for low autocorrelated binary sequences. IEEE Trans. Evol. Comput. 2 (1) (1998)