Shinn-Ying Ho

Publication Activity (10 Years)

Years Active: 1991-2020
Publications (10 Years): 8

Top Topics

Gene Regulatory

Protein Complexes

Confidence Levels

Top Venues

Int. J. Document Anal. Recognit.

Publications

Ming-Ju Tsai, Jyun-Rong Wang, Shinn-Jang Ho, Li-Sun Shu, Wen-Lin Huang, Shinn-Ying Ho
GREMA: modelling of emulated gene regulatory networks with confidence levels based on evolutionary intelligence to cope with the underdetermined problem. Bioinform. 36 (12) (2020)
Tzu-Yun Lo, Pei-Yin Wei, Chia-Heng Yen, Jiing-Feng Lirng, Muh-Hwa Yang, Pen-Yuan Chu, Shinn-Ying Ho
Prediction of Metastasis in Head and Neck Cancer from Computed Tomography Images. ICRAI (2018)
Papangkorn Inkeaw, Jakramate Bootkrajang, Phasit Charoenkwan, Sanparith Marukatat, Shinn-Ying Ho, Jeerayut Chaijaruwanich
Recognition-based character segmentation for multi-level writing style. Int. J. Document Anal. Recognit. 21 (1-2) (2018)
Papangkorn Inkeaw, Phasit Charoenkwan, Hui-Ling Huang, Sanparith Marukatat, Shinn-Ying Ho, Jeerayut Chaijaruwanich
Recognition of handwritten Lanna Dhamma characters using a set of optimally designed moment features. Int. J. Document Anal. Recognit. 20 (4) (2017)
Jyun-Rong Wang, Wen-Lin Huang, Ming-Ju Tsai, Kai-Ti Hsu, Hui-Ling Huang, Shinn-Ying Ho
ESA-UbiSite: accurate prediction of human ubiquitination sites by identifying a set of effective negatives. Bioinform. 33 (5) (2017)
Papangkorn Inkeaw, Jakramate Bootkrajang, Phasit Charoenkwan, Sanparith Marukatat, Shinn-Ying Ho, Jeerayut Chaijaruwanich
Rule-Based Page Segmentation for Palm Leaf Manuscript on Color Image. ICADL (2016)
Yi-Fan Liou, Hui-Ling Huang, Shinn-Ying Ho
A hydrophobic spine stabilizes a surface-exposed α-helix according to analysis of the solvent-accessible surface area. BMC Bioinform. 17 (S-19) (2016)
Tamara Vasylenko, Yi-Fan Liou, Po-Chin Chiou, Hsiao-Wei Chu, Yung-Sung Lai, Yu-Ling Chou, Hui-Ling Huang, Shinn-Ying Ho
SCMBYK: prediction and characterization of bacterial tyrosine-kinases based on propensity scores of dipeptides. BMC Bioinform. 17 (S-19) (2016)
Tamara Vasylenko, Yi-Fan Liou, Hong-An Chen, Phasit Charoenkwan, Hui-Ling Huang, Shinn-Ying Ho
SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method. BMC Bioinform. 16 (S-1) (2015)
Hui-Ling Huang, Yu-Chung Wu, Li-Jen Su, Yun-Ju Huang, Phasit Charoenkwan, Wen-Liang Chen, Hua-Chin Lee, William C. Chu, Shinn-Ying Ho
Discovery of prognostic biomarkers for predicting lung cancer metastasis using microarray and survival data. BMC Bioinform. 16 (2015)
Yerukala Sathipati Srinivasulu, Jyun-Rong Wang, Kai-Ti Hsu, Ming-Ju Tsai, Phasit Charoenkwan, Wen-Lin Huang, Hui-Ling Huang, Shinn-Ying Ho
Characterizing informative sequence descriptors and predicting binding affinities of heterodimeric protein complexes. BMC Bioinform. 16 (S18) (2015)
Yi-Hsiung Chen, Chi-Dung Yang, Ching-Ping Tseng, Hsien-Da Huang, Shinn-Ying Ho
GeNOSA: inferring and experimentally supporting quantitative gene regulatory networks in prokaryotes. Bioinform. 31 (13) (2015)
Yi-Fan Liou, Phasit Charoenkwan, Yerukala Sathipati Srinivasulu, Tamara Vasylenko, Shih-Chung Lai, Hua-Chin Lee, Yi-Hsiung Chen, Hui-Ling Huang, Shinn-Ying Ho
SCMHBP: prediction and analysis of heme binding proteins using propensity scores of dipeptides. BMC Bioinform. 15 (S-16) (2014)
Phasit Charoenkwan, Eric Hwang, Robert W. Cutler, Hua-Chin Lee, Li-Wei Ko, Hui-Ling Huang, Shinn-Ying Ho
HCS-Neurons: identifying phenotypic changes in multi-neuron images upon drug treatments of high-content screening. BMC Bioinform. 14 (S-16) (2013)
Watshara Shoombuatong, Hui-Ling Huang, Jeerayut Chaijaruwanich, Phasit Charoenkwan, Hua-Chin Lee, Shinn-Ying Ho
Predicting protein crystallization using a simple scoring card method. CIBCB (2013)
Hui-Ling Huang, Yerukala Sathipati Srinivasulu, Phasit Charoenkwan, Hua-Chin Lee, Shinn-Ying Ho
Designing predictors of halophilic and non-halophilic proteins using support vector machines. CIBCB (2013)
Li-Wei Ko, Hua-Chin Lee, Shu-Fang Tsai, Tsung-Chin Shih, Ya-Ting Chuang, Hui-Ling Huang, Shinn-Ying Ho, Chin-Teng Lin
EEG-based motion sickness classification system with genetic feature selection. CCMB (2013)
Tse-Chuan Hsu, Chih-Hung Chang, William C. Chu, Shinn-Ying Ho, Nien-Lin Hsueh, Wei-Bin Lee
Applying Cloud Computing Technologies to Gerontology and Geriatrics Health Care System (GGHCS). QSIC (2013)
Hui-Ling Huang, Ming-Hsin Hsu, Hua-Chin Lee, Phasit Charoenkwan, Shinn-Jang Ho, Shinn-Ying Ho
Prediction of Mouse Senescence from HE-Stain Liver Images Using an Ensemble SVM Classifier. ACIIDS (2) (2013)
Hui-Ling Huang, Phasit Charoenkwan, Te-Fen Kao, Hua-Chin Lee, Fang-Lin Chang, Wen-Lin Huang, Shinn-Jang Ho, Li-Sun Shu, Wen-Liang Chen, Shinn-Ying Ho
Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition. BMC Bioinform. 13 (S-17) (2012)
Chin-Teng Lin, Shu-Fang Tsai, Hua-Chin Lee, Hui-Ling Huang, Shinn-Ying Ho, Li-Wei Ko
Motion sickness estimation system. IJCNN (2012)
Chun-Wei Tung, Matthias Ziehm, Andreas Kämper, Oliver Kohlbacher, Shinn-Ying Ho
POPISK: T-cell reactivity prediction using support vector machines and string kernels. BMC Bioinform. 12 (2011)
Shinn-Ying Ho, Chih-Yuan Chao, Hui-Ling Huang, Tzai-Wen Chiu, Phasit Charoenkwan, Eric Hwang
NeurphologyJ: an automatic neuronal morphology quantification method and its application in pharmacological discovery. BMC Bioinform. 12 (2011)
Hui-Ling Huang, I-Che Lin, Yi-Fan Liou, Chia-Ta Tsai, Kai-Ti Hsu, Wen-Lin Huang, Shinn-Jang Ho, Shinn-Ying Ho
Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties. BMC Bioinform. 12 (S-1) (2011)
Hsi-Yuan Huang, Heng-Yi Chang, Chih-Hung Chou, Ching-Ping Tseng, Shinn-Ying Ho, Chi-Dung Yang, Yih-Wei Ju, Hsien-Da Huang
sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes. Nucleic Acids Res. 37 (Database-Issue) (2009)
Wen-Lin Huang, Chun-Wei Tung, Hui-Ling Huang, Shinn-Ying Ho
Predicting protein subnuclear localization using GO-amino-acid composition features. Biosyst. 98 (2) (2009)
Hsin-Nan Lin, Ching-Tai Chen, Ting-Yi Sung, Shinn-Ying Ho, Wen-Lian Hsu
Protein subcellular localization prediction of eukaryotes using a knowledge-based approach. BMC Bioinform. 10 (S-15) (2009)
Shinn-Ying Ho, Hung-Sui Lin, Weei-Hurng Liauh, Shinn-Jang Ho
OPSO: Orthogonal Particle Swarm Optimization and Its Application to Task Assignment Problems. IEEE Trans. Syst. Man Cybern. Part A 38 (2) (2008)
Chun-Wei Tung, Shinn-Ying Ho
Computational identification of ubiquitylation sites from protein sequences. BMC Bioinform. 9 (2008)
Wen-Lin Huang, Chun-Wei Tung, Shih-Wen Ho, Shinn-Ying Ho
ProLoc-rGO: Using rule-based knowledge with Gene Ontology terms for prediction of protein subnuclear localization. CIBCB (2008)
Ming-Hao Hung, Li-Sun Shu, Shinn-Jang Ho, Shiow-Fen Hwang, Shinn-Ying Ho
A Novel Intelligent Multiobjective Simulated Annealing Algorithm for Designing Robust PID Controllers. IEEE Trans. Syst. Man Cybern. Part A 38 (2) (2008)
Wen-Lin Huang, Chun-Wei Tung, Shih-Wen Ho, Shiow-Fen Hwang, Shinn-Ying Ho
ProLoc-GO: Utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization. BMC Bioinform. 9 (2008)
Hui-Ling Huang, Kuan-Wei Chen, Shinn-Jang Ho, Shinn-Ying Ho
Inferring S-system models of genetic networks from a time-series real data set of gene expression profiles. IEEE Congress on Evolutionary Computation (2008)
Shinn-Ying Ho, Chih-Hung Hsieh, Fu-Chieh Yu, Hui-Ling Huang
An Intelligent Two-Stage Evolutionary Algorithm for Dynamic Pathway Identification From Gene Expression Profiles. IEEE ACM Trans. Comput. Biol. Bioinform. 4 (4) (2007)
Hung-Ming Chen, Bo-Fu Liu, Hui-Ling Huang, Shiow-Fen Hwang, Shinn-Ying Ho
SODOCK: Swarm optimization for highly flexible protein-ligand docking. J. Comput. Chem. 28 (2) (2007)
Shinn-Jang Ho, Chia-Yun Chang, Liang-Tsung Huang, Shiow-Fen Hwang, Shinn-Ying Ho
Acquisition of rule-based knowledge for analyzing DNA-binding sites in proteins. Infoscale (2007)
Hui-Ling Huang, Chong-Cheng Lee, Shinn-Ying Ho
Selecting a minimal number of relevant genes from microarray data to design accurate tissue classifiers. Biosyst. 90 (1) (2007)
Wen-Lin Huang, Hung-Ming Chen, Shiow-Fen Hwang, Shinn-Ying Ho
Accurate prediction of enzyme subfamily class using an adaptive fuzzy k-nearest neighbor method. Biosyst. 90 (2) (2007)
Shinn-Ying Ho, Fu-Chieh Yu, Chia-Yun Chang, Hui-Ling Huang
Design of accurate predictors for DNA-binding sites in proteins using hybrid SVM-PSSM method. Biosyst. 90 (1) (2007)
Wen-Lin Huang, Chun-Wei Tung, Hui-Ling Huang, Shiow-Fen Hwang, Shinn-Ying Ho
ProLoc: Prediction of protein subnuclear localization using SVM with automatic selection from physicochemical composition features. Biosyst. 90 (2) (2007)
Liang-Tsung Huang, M. Michael Gromiha, Shinn-Ying Ho
iPTREE-STAB: interpretable decision tree based method for predicting protein stability changes upon mutations. Bioinform. 23 (10) (2007)
Hui-Ling Huang, Yi-Hsiung Chen, Dwight D. Koeberl, Shinn-Ying Ho
Boosting Evolutionary Support Vector Machine for Designing Tumor Classifiers from Microarray Data. CIBCB (2007)
Chun-Wei Tung, Shinn-Ying Ho
POPI: predicting immunogenicity of MHC class I binding peptides by mining informative physicochemical properties. Bioinform. 23 (8) (2007)
Shinn-Jang Ho, Li-Sun Shu, Shinn-Ying Ho
Optimizing fuzzy neural networks for tuning PID controllers using an orthogonal simulated annealing algorithm OSA. IEEE Trans. Fuzzy Syst. 14 (3) (2006)
Shinn-Jang Ho, Wen-Yuan Ku, Jun-Wun Jou, Ming-Hao Hung, Shinn-Ying Ho
Intelligent Particle Swarm Optimization in Multi-objective Problems. PAKDD (2006)
Liang-Tsung Huang, M. Michael Gromiha, Shiow-Fen Hwang, Shinn-Ying Ho
Knowledge acquisition and development of accurate rules for predicting protein stability changes. Comput. Biol. Chem. 30 (6) (2006)
Shinn-Ying Ho, Chih-Hung Hsieh, Kuan-Wei Chen, Hui-Ling Huang, Hung-Ming Chen, Shinn-Jang Ho
Scoring Method for Tumor Prediction from Microarray Data Using an Evolutionary Fuzzy Classifier. PAKDD (2006)
Shinn-Ying Ho, Chong-Cheng Lee, Hung-Ming Chen, Hui-Ling Huang
Efficient gene selection for classification of microarray data. Congress on Evolutionary Computation (2005)
Jian-Hung Chen, Shinn-Ying Ho, David E. Goldberg
Quality-time analysis of multi-objective evolutionary algorithms. GECCO (2005)
Larry Huang, Wen-Lin Huang, Shinn-Ying Ho, Shiow-Fen Hwang
Interpretable Prediction of Protein Stability Changes upon Mutation by Using Decision Tree. CIBCB (2005)
Bo-Fu Liu, Hung-Ming Chen, Jian-Hung Chen, Shiow-Fen Hwang, Shinn-Ying Ho
MeSwarm: memetic particle swarm optimization. GECCO (2005)
Shinn-Ying Ho, Chih-Hung Hsieh, Fu-Chieh Yu, Hui-Ling Huang
Evolutionary divide-and-conquer approach to inferring S-system models of genetic networks. Congress on Evolutionary Computation (2005)
Bo-Fu Liu, Hung-Ming Chen, Hui-Ling Huang, Shiow-Fen Hwang, Shinn-Ying Ho
Flexible protein-ligand docking using particle swarm optimization. Congress on Evolutionary Computation (2005)
Jian-Hung Chen, Hung-Ming Chen, Shinn-Ying Ho
Design of nearest neighbor classifiers: multi-objective approach. Int. J. Approx. Reason. 40 (1-2) (2005)
Shinn-Ying Ho, Chih-Hung Hsieh, Fu-Chieh Yu
Inference of S-system Models for Large-Scale Genetic Networks. ICDE Workshops (2005)
Shinn-Jang Ho, Shinn-Ying Ho, Ming-Hao Hung, Li-Sun Shu, Hui-Ling Huang
optimal controllers using an intelligent genetic algorithm IGA. IEEE Trans. Control. Syst. Technol. 13 (6) (2005)
Shinn-Ying Ho, Hung-Ming Chen, Shinn-Jang Ho, Tai-Kang Chen
Design of accurate classifiers with a compact fuzzy-rule base using an evolutionary scatter partition of feature space. IEEE Trans. Syst. Man Cybern. Part B 34 (2) (2004)
Shinn-Ying Ho, Li-Sun Shu, Jian-Hung Chen
Intelligent evolutionary algorithms for large parameter optimization problems. IEEE Trans. Evol. Comput. 8 (6) (2004)
Li-Sun Shu, Shinn-Jang Ho, Shinn-Ying Ho, Jian-Hung Chen, Ming-Hao Hung
A Novel Multi-objective Orthogonal Simulated Annealing Algorithm for Solving Multi-objective Optimization Problems with a Large Number of Parameters. GECCO (1) (2004)
Jian-Hung Chen, Hung-Ming Chen, Shinn-Ying Ho
Design of Nearest Neighbor Classifiers Using an Intelligent Multi-objective Evolutionary Algorithm. PRICAI (2004)
Shinn-Ying Ho, Jian-Hung Chen, Meng-Hsun Huang
Inheritable genetic algorithm for biobjective 0/1 combinatorial optimization problems and its applications. IEEE Trans. Syst. Man Cybern. Part B 34 (1) (2004)
Shinn-Ying Ho, Shinn-Jang Ho, Yi-Kuang Lin, W. C.-C. Chu
An orthogonal simulated annealing algorithm for large floorplanning problems. IEEE Trans. Very Large Scale Integr. Syst. 12 (8) (2004)
Shin-Hang Ho, Shinn-Ying Ho, Li-Sun Shu
optimal controllers. IEEE Trans. Syst. Man Cybern. Part A 34 (5) (2004)
Shinn-Ying Ho, Kual-Zheng Lee
Design and Analysis of an Efficient Evolutionary Image Segmentation Algorithm. J. VLSI Signal Process. 35 (1) (2003)
Li-Sun Shu, Shinn-Jang Ho, Shinn-Ying Ho
A Novel Orthogonal Simulated Annealing Algorithm for Optimization of Electromagnetic Problems. IDEAL (2003)
Kual-Zheng Lee, Wei-Che Chuang, Shinn-Ying Ho
A Non-parametric Image Segmentation Algorithm Using an Orthogonal Experimental Design Based Hill-Climbing. IDEAL (2003)
Kual-Zheng Lee, Ting-Wei Liu, Shinn-Ying Ho
Model-Based Pose Estimation of Human Motion Using Orthogonal Simulated Annealing. IDEAL (2003)
Hui-Ling Huang, Shinn-Ying Ho
Mesh optimization for surface approximation using an efficient coarse-to-fine evolutionary algorithm. Pattern Recognit. 36 (5) (2003)
Shinn-Ying Ho, Chia-Cheng Liu, Soundy Liu, Jun-Wen Jou
Design of an optimal nearest neighbor classifier using an intelligent genetic algorithm. IEEE Congress on Evolutionary Computation (2002)
Shinn-Ying Ho, Tai-Kang Chen, Shinn-Jang Ho
Design of high performance fuzzy controllers using flexible parameterized membership functions and intelligent genetic algorithms. IEEE Congress on Evolutionary Computation (2002)
Shinn-Ying Ho, Chia-Cheng Liu, Soundy Liu
Design of an optimal nearest neighbor classifier using an intelligent genetic algorithm. Pattern Recognit. Lett. 23 (13) (2002)
Jian-Hung Chen, David E. Goldberg, Shinn-Ying Ho, Kumara Sastry
Fitness Inheritance In Multi-objective Optimization. GECCO (2002)
Shinn-Ying Ho, Zhen-Bang Huang, Shinn-Jang Ho
An evolutionary approach for pose determination and interpretation of occluded articulated objects. IEEE Congress on Evolutionary Computation (2002)
Hui-Ling Huang, Shinn-Ying Ho
Mesh optimization for surface approximation using an efficient coarse-to-fine evolutionary algorithm. CEC (2001)
Shinn-Ying Ho, Hui-Ling Huang
Facial modeling from an uncalibrated face image using flexible generic parameterized facial models. IEEE Trans. Syst. Man Cybern. Part B 31 (5) (2001)
Shinn-Ying Ho, Kual-Zheng Lee
An efficient evolutionary image segmentation algorithm. CEC (2001)
Shinn-Ying Ho, Yeong-Chinq Chen
An efficient evolutionary algorithm for accurate polygonal approximation. Pattern Recognit. 34 (12) (2001)
Shinn-Ying Ho, Hui-Ling Huang
Facial modeling from an uncalibrated face image using a coarse-to-fine genetic algorithm. Pattern Recognit. 34 (5) (2001)
Shinn-Ying Ho, Kual-Zheng Lee
A Simple and Fast GA-SA hybrid Image Segmentation Algorithm. GECCO (2000)
Shinn-Ying Ho, Meng-Hsun Huang
An Efficient Quadratic Curve Approximation Using an Intelligent Genetic Algorithm. GECCO (2000)
Shinn-Ying Ho, Tai-Kang Chen, Shinn-Jang Ho
Designing an Efficient Fuzzy classifier Using an Intelligent Genetic Algorithm. COMPSAC (2000)
Shinn-Ying Ho, Hui-Ling Huang
An analytic solution for the pose determination of human faces from a monocular image. Pattern Recognit. Lett. 19 (11) (1998)
Zen Chen, Tsorng-Lin Chia, Shinn-Ying Ho
Measuring 3-D location and shape parameters of cylinders by a spatial encoding technique. IEEE Trans. Robotics Autom. 10 (5) (1994)
Zen Chen, Chao-Ming Wang, Shinn-Ying Ho
An effective search approach to camera parameter estimation using an arbitrary planar calibration object. Pattern Recognit. 26 (5) (1993)
Zen Chen, Shinn-Ying Ho
Incremental model building of polyhedral objects using structured light. Pattern Recognit. 26 (1) (1993)
Zen Chen, Shinn-Ying Ho, Din-Chang Tseng
Polyhedral face reconstruction and modeling from a single image with structured light. IEEE Trans. Syst. Man Cybern. 23 (3) (1993)
Zen Chen, Shinn-Ying Ho
Computer vision for robust 3D aircraft recognition with fast library search. Pattern Recognit. 24 (5) (1991)