Patrick S. Schnable

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 15

Top Topics

Semi Global Matching

Collaborative Environment

Visual Exploration

Convolutional Neural Networks

Top Venues

J. Field Robotics

Comput. Electron. Agric.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Baskar Ganapathysubramanian, Jessica M. P. Bell, George Kantor, Nirav C. Merchant, Soumik Sarkar, Patrick S. Schnable, Michelle Segovia, Arti Singh, Asheesh K. Singh
AIIRA: AI Institute for Resilient Agriculture. AI Mag. 45 (1) (2024)
Jiale Feng, Mojdeh Saadati, Talukder Z. Jubery, Anushrut Jignasu, Aditya Balu, Yawei Li, Lakshmi Attigala, Patrick S. Schnable, Soumik Sarkar, Baskar Ganapathysubramanian, Adarsh Krishnamurthy
3D reconstruction of plants using probabilistic voxel carving. Comput. Electron. Agric. 213 (2023)
Lirong Xiang, Jingyao Gai, Yin Bao, Jianming Yu, Patrick S. Schnable, Lie Tang
Field-based robotic leaf angle detection and characterization of maize plants using stereo vision and deep convolutional neural networks. J. Field Robotics 40 (5) (2023)
Carolyn J. Lawrence-Dill, Robyn L. Allscheid, Albert Boaitey, Todd Bauman, Edward S. Buckler IV, Jennifer L. Clarke, Christopher Cullis, Jack Dekkers, Cassandra J. Dorius, Shawn F. Dorius, David Ertl, Matthew Homann, Guiping Hu, Mary Losch, Eric Lyons, Brenda Murdoch, Zahra-Katy Navabi, Somashekhar Punnuri, Fahad Rafiq, James M. Reecy, Patrick S. Schnable, Nicole M. Scott, Moira Sheehan, Xavier Sirault, Margaret Staton, Christopher K. Tuggle, Alison Van Eenennaam, Rachael Voas
Ten simple rules to ruin a collaborative environment. PLoS Comput. Biol. 18 (4) (2022)
Methun Kamruzzaman, Ananth Kalyanaraman, Bala Krishnamoorthy, Stefan Hey, Patrick S. Schnable
Hyppo-X: A Scalable Exploratory Framework for Analyzing Complex Phenomics Data. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (4) (2021)
Youjia Zhou, Methun Kamruzzaman, Patrick S. Schnable, Bala Krishnamoorthy, Ananth Kalyanaraman, Bei Wang
Pheno-Mapper: An Interactive Toolbox for the Visual Exploration of Phenomics Data. CoRR (2021)
Matthias Sander Frigau, Tianyi Zhang, Chen-Ye Lim, Hongwei Zhang, Ahmed E. Kamal, Arun K. Somani, Stefan Hey, Patrick S. Schnable
A Measurement Study of TVWS Wireless Channels in Crop Farms. MASS (2021)
Hongwei Zhang, Yong Guan, Ahmed E. Kamal, Daji Qiao, Mai Zheng, Anish Arora, Ozdal Boyraz, Brian Cox, Thomas Daniels, Matthew Darr, Doug Jacobson, Ashfaq A. Khokhar, Sang Wu Kim, James Koltes, Jia Liu, Mike Luby, Larysa Nadolny, Joshua M. Peschel, Patrick S. Schnable, Anuj Sharma, Arun Somani, Lie Tang
ARA: A Wireless Living Lab Vision for Smart and Connected Rural Communities. WiNTECH@MOBICOM (2021)
Youjia Zhou, Methun Kamruzzaman, Patrick S. Schnable, Bala Krishnamoorthy, Ananth Kalyanaraman, Bei Wang
Pheno-mapper: an interactive toolbox for the visual exploration of phenomics data. BCB (2021)
Yin Bao, Lie Tang, Matthew W. Breitzman, Maria G. Salas Fernandez, Patrick S. Schnable
Field-based robotic phenotyping of sorghum plant architecture using stereo vision. J. Field Robotics 36 (2) (2019)
Snehal Shete, Srikant Srinivasan, Seyed Vahid Mirnezami, Baskar Ganapathysubramanian, Patrick S. Schnable, Timothy Gonsalves
An automated tassel detection and trait extraction pipeline to support high-throughput field imaging of maize. ICVGIP (2018)
Seval Oren, Zhaokui Wang, Xinran Wang, Shawana Tabassum, Yueyi Jiao, Byron J. Montgomery, Nathan M. Neihart, Colton M. McNinch, Patrick S. Schnable, Liang Dong
Tracking of water movement dynamics inside plants using leaf surface humidity sensors. NEMS (2017)
Methun Kamruzzaman, Ananth Kalyanaraman, Bala Krishnamoorthy, Patrick S. Schnable
Toward A Scalable Exploratory Framework for Complex High-Dimensional Phenomics Data. CoRR (2017)
Vikas Chawla, Hsiang Sing Naik, Adedotun Akintayo, Dermot Hayes, Patrick S. Schnable, Baskar Ganapathysubramanian, Soumik Sarkar
A Bayesian Network approach to County-Level Corn Yield Prediction using historical data and expert knowledge. CoRR (2016)
Rong Shen, Kai Ying, Zhengdao Wang, Patrick S. Schnable
Algorithm for DNA copy number variation detection with read depth and paramorphism information. ICASSP (2016)
Lars Koesterke, Daniel Stanzione, Matthew W. Vaughn, Stephen M. Welch, Waclaw Kusnierczyk, Jinliang Yang, Cheng-Ting Yeh, Dan Nettleton, Patrick S. Schnable
An Efficient and Scalable Implementation of SNP-Pair Interaction Testing for Genetic Association Studies. IPDPS Workshops (2011)
Benjamin G. Jackson, Matthew Regennitter, Xiao Yang, Patrick S. Schnable, Srinivas Aluru
Parallel de novo assembly of large genomes from high-throughput short reads. IPDPS (2010)
Hui-Hsien Chou, Arunee Trisiriroj, Sunyoung Park, Yue-Ie C. Hsing, Pamela C. Ronald, Patrick S. Schnable
Direct calibration of PICKY-designed microarrays. BMC Bioinform. 10 (2009)
Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru
Assembly of Large Genomes from Paired Short Reads. BICoB (2009)
Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru
Parallel short sequence assembly of transcriptomes. BMC Bioinform. 10 (S-1) (2009)
Ruixiao Lu, Geun-Cheol Lee, Michael Shultz, Chris Dardick, Kihong Jung, Jirapa Phetsom, Yi Jia, Robert H. Rice, Zelanna Goldberg, Patrick S. Schnable, Pamela C. Ronald, David M. Rocke
Assessing probe-specific dye and slide biases in two-color microarray data. BMC Bioinform. 9 (2008)
Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru
Consensus Genetic Maps as Median Orders from Inconsistent Sources. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (2) (2008)
Anantharaman Kalyanaraman, Scott J. Emrich, Patrick S. Schnable, Srinivas Aluru
Assembling genomes on large-scale parallel computers. J. Parallel Distributed Comput. 67 (12) (2007)
David S. Skibbe, Xiujuan Wang, Xuefeng Zhao, Lisa A. Borsuk, Dan Nettleton, Patrick S. Schnable
Scanning microarrays at multiple intensities enhances discovery of differentially expressed genes. Bioinform. 22 (15) (2006)
Anantharaman Kalyanaraman, Scott J. Emrich, Patrick S. Schnable, Srinivas Aluru
Assembling genomes on large-scale parallel computers. IPDPS (2006)
Benjamin G. Jackson, Srinivas Aluru, Patrick S. Schnable
Consensus Genetic Maps: A Graph Theoretic Approach. CSB (2005)
Daniel A. Ashlock, Ruth Swanson, Patrick S. Schnable
Selection of Genetically Diverse Recombinant Inbreds with an Ordered Gene Evolutionary Algorithm. CIBCB (2005)
Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable
Using the biological taxonomy to access biological literature with PathBinderH. Bioinform. 21 (10) (2005)
Hui-Hsien Chou, An-Ping Hsia, Denise L. Mooney, Patrick S. Schnable
Picky: oligo microarray design for large genomes. Bioinform. 20 (17) (2004)
Scott J. Emrich, Srinivas Aluru, Yan Fu, Tsui-Jung Wen, Mahesh Narayanan, Ling Guo, Daniel A. Ashlock, Patrick S. Schnable
A strategy for assembling the maize (Zea mays L.) genome. Bioinform. 20 (2) (2004)
Daniel A. Ashlock, Scott J. Emrich, Kenneth Mark Bryden, Steven M. Corns, Tsui-Jung Wen, Patrick S. Schnable
A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design. CIBCB (2004)