Dan Nettleton

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 12

Top Topics

Prediction Intervals

Top Venues

J. Multivar. Anal.

Publications

Yan Wang, Huaiqing Wu, Dan Nettleton
Stability of Random Forests and Coverage of Random-Forest Prediction Intervals. CoRR (2023)
Hyeongseon Jeon, Kyu-Sang Lim, Yet Nguyen, Dan Nettleton
Adjusting for gene-specific covariates to improve RNA-seq analysis. Bioinform. 39 (8) (2023)
Yan Wang, Huaiqing Wu, Dan Nettleton
Stability of Random Forests and Coverage of Random-Forest Prediction Intervals. NeurIPS (2023)
Liuhua Peng, Long Qu, Dan Nettleton
Variable importance assessments and backward variable selection for multi-sample problems. J. Multivar. Anal. 186 (2021)
Yet Nguyen, Dan Nettleton
rmRNAseq: differential expression analysis for repeated-measures RNA-seq data. Bioinform. 36 (16) (2020)
Saeed Khaki, Dan Nettleton
Conformal Prediction Intervals for Neural Networks Using Cross Validation. CoRR (2020)
Andrew J. Sage, Ulrike Genschel, Dan Nettleton
Tree aggregation for random forest class probability estimation. Stat. Anal. Data Min. 13 (2) (2020)
Haozhe Zhang, Dan Nettleton, Zhengyuan Zhu
Regression-Enhanced Random Forests. CoRR (2019)
Xinyi Li, Li Wang, Dan Nettleton
Sparse model identification and learning for ultra-high-dimensional additive partially linear models. J. Multivar. Anal. 173 (2019)
Kun Liang, Chuanlong Du, Hankun You, Dan Nettleton
A hidden Markov tree model for testing multiple hypotheses corresponding to Gene Ontology gene sets. BMC Bioinform. 19 (1) (2018)
Naihui Zhou, Zachary D. Siegel, Scott Zarecor, Nigel Lee, Darwin A. Campbell, Carson M. Andorf, Dan Nettleton, Carolyn J. Lawrence-Dill, Baskar Ganapathysubramanian, Jonathan W. Kelly, Iddo Friedberg
Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning. PLoS Comput. Biol. 14 (7) (2018)
Sam Benidt, Dan Nettleton
SimSeq: a nonparametric approach to simulation of RNA-sequence datasets. Bioinform. 31 (13) (2015)
Megan Orr, Peng Liu, Dan Nettleton
An improved method for computing q-values when the distribution of effect sizes is asymmetric. Bioinform. 30 (21) (2014)
Heng Wang, Dan Nettleton, Kai Ying
Copy number variation detection using next generation sequencing read counts. BMC Bioinform. 15 (2014)
Lars Koesterke, Daniel Stanzione, Matthew W. Vaughn, Stephen M. Welch, Waclaw Kusnierczyk, Jinliang Yang, Cheng-Ting Yeh, Dan Nettleton, Patrick S. Schnable
An Efficient and Scalable Implementation of SNP-Pair Interaction Testing for Genetic Association Studies. IPDPS Workshops (2011)
Dan Nettleton, Justin Recknor, James M. Reecy
Identification of differentially expressed gene categories in microarray studies using nonparametric multivariate analysis. Bioinform. 24 (2) (2008)
Wuyan Zhang, Alicia L. Carriquiry, Dan Nettleton, Jack C. M. Dekkers
Pooling mRNA in microarray experiments and its effect on power. Bioinform. 23 (10) (2007)
Rhonda DeCook, Dan Nettleton, Carol Foster, Eve Syrkin Wurtele
Identifying differentially expressed genes in unreplicated multiple-treatment microarray timecourse experiments. Comput. Stat. Data Anal. 50 (2) (2006)
David S. Skibbe, Xiujuan Wang, Xuefeng Zhao, Lisa A. Borsuk, Dan Nettleton, Patrick S. Schnable
Scanning microarrays at multiple intensities enhances discovery of differentially expressed genes. Bioinform. 22 (15) (2006)
Lishuang Shen, Jian Gong, Rico A. Caldo, Dan Nettleton, Dianne Cook, Roger P. Wise, Julie A. Dickerson
BarleyBase - an expression profiling database for plant genomics. Nucleic Acids Res. 33 (Database-Issue) (2005)
J. T. Gene Hwang, Dan Nettleton
Principal Components Regression With Data Chosen Components and Related Methods. Technometrics 45 (1) (2003)
Wei Huang, Dan Nettleton, Xun Gu
Expression pattern of yeast sporulation: a case study for regulatory changes after yeast genome duplication. Inf. Sci. 145 (3-4) (2002)
Wei Huang, Dan Nettleton, Xun Gu
Expression Pattern of Yeast Sporulation: A Case Study for Regulatory Changes after Yeast Genome Duplication. JCIS (2002)
Jing Ding, Daniel Berleant, Dan Nettleton, Eve Syrkin Wurtele
Mining MEDLINE: Abstracts, Sentences, or Phrases? Pacific Symposium on Biocomputing (2002)