Michelle S. Scott

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 12

Top Topics

Secondary Structure

Comprehensive Guide

Top Venues

Nucleic Acids Res.

Publications

Sébastien Leblanc, Marie A. Brunet, Jean-Francois Jacques, Amina M. Lekehal, Andréa Duclos, Alexia Tremblay, Alexis Bruggeman-Gascon, Sondos Samandi, Mylène Brunelle, Alan A. Cohen, Michelle S. Scott, Xavier Roucou
Newfound Coding Potential of Transcripts Unveils Missing Members of Human Protein Communities. Genom. Proteom. Bioinform. 21 (3) (2023)
Danny Bergeron, Hermes Paraqindes, Étienne Fafard-Couture, Gabrielle Deschamps-Francoeur, Laurence Faucher-Giguère, Philia Bouchard-Bourelle, Sherif Abou Elela, Frédéric Catez, Virginie Marcel, Michelle S. Scott
snoDB 2.0: an enhanced interactive database, specializing in human snoRNAs. Nucleic Acids Res. 51 (D1) (2023)
Delong Zhou, Yvan Tran, Sherif Abou Elela, Michelle S. Scott
SAPFIR: A webserver for the identification of alternative protein features. BMC Bioinform. 23 (1) (2022)
Joël Simoneau, Simon Dumontier, Ryan Gosselin, Michelle S. Scott
Current RNA-seq methodology reporting limits reproducibility. Briefings Bioinform. 22 (1) (2021)
Marie A. Brunet, Jean-François Lucier, Maxime Levesque, Sébastien Leblanc, Jean-Francois Jacques, Hassan R. H. Al-Saedi, Noé Guilloy, Frédéric Grenier, Mariano Avino, Isabelle Fournier, Michel Salzet, Aïda Ouangraoua, Michelle S. Scott, François-Michel Boisvert, Xavier Roucou
OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes. Nucleic Acids Res. 49 (Database-Issue) (2021)
Blake A. Sweeney, Anton I. Petrov, Carlos Eduardo Ribas, Robert D. Finn, Alex Bateman, Maciej Szymanski, Wojciech M. Karlowski, Stefan E. Seemann, Jan Gorodkin, Jamie J. Cannone, Robin Ray Gutell, Simon Kay, Steven J. Marygold, Gilberto dos Santos, Adam Frankish, Jonathan M. Mudge, Ruth Barshir, Simon Fishilevich, Patricia P. Chan, Todd M. Lowe, Ruth L. Seal, Elspeth A. Bruford, Simona Panni, Pablo Porras, Dimitra Karagkouni, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Pieter-Jan Volders, Pieter Mestdagh, Sam Griffiths-Jones, Bastian Fromm, Kevin J. Peterson, Ioanna Kalvari, Eric P. Nawrocki, Anton S. Petrov, Shuai Weng, Philia Bouchard-Bourelle, Michelle S. Scott, Lauren M. Lui, David Hoksza, Ruth C. Lovering, Barbara Kramarz, Prita Mani, Sridhar Ramachandran, Zasha Weinberg
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Res. 49 (Database-Issue) (2021)
Philia Bouchard-Bourelle, Clément Desjardins-Henri, Darren Mathurin-St-Pierre, Gabrielle Deschamps-Francoeur, Étienne Fafard-Couture, Jean-Michel Garant, Sherif Abou Elela, Michelle S. Scott
snoDB: an interactive database of human snoRNA sequences, abundance and interactions. Nucleic Acids Res. 48 (Database-Issue) (2020)
Gabrielle Deschamps-Francoeur, Vincent Boivin, Sherif Abou Elela, Michelle S. Scott
CoCo: RNA-seq read assignment correction for nested genes and multimapped reads. Bioinform. 35 (23) (2019)
Marie A. Brunet, Mylène Brunelle, Jean-François Lucier, Vivian Delcourt, Maxime Levesque, Frédéric Grenier, Sondos Samandi, Sébastien Leblanc, Jean-David Aguilar, Pascal Dufour, Jean-Francois Jacques, Isabelle Fournier, Aïda Ouangraoua, Michelle S. Scott, François-Michel Boisvert, Xavier Roucou
OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes. Nucleic Acids Res. 47 (Database-Issue) (2019)
Safa Jammali, Esaie Kuitche, Ayoub Rachati, François Bélanger, Michelle S. Scott, Aïda Ouangraoua
Aligning coding sequences with frameshift extension penalties. Algorithms Mol. Biol. 12 (1) (2017)
Jean-Michel Garant, Jean-Pierre Perreault, Michelle S. Scott
Motif independent identification of potential RNA G-quadruplexes by G4RNA screener. Bioinform. 33 (22) (2017)
Safa Jammali, Esaie Kuitche, Ayoub Rachati, François Bélanger, Michelle S. Scott, Aïda Ouangraoua
Aligning coding sequences with frameshift extension penalties. CoRR (2016)
Jean-Michel Garant, Mikael J. Luce, Michelle S. Scott, Jean-Pierre Perreault
G4RNA: an RNA G-quadruplex database. Database J. Biol. Databases Curation 2015 (2015)
Michelle S. Scott, Peter V. Troshin, Geoffrey J. Barton
NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins. BMC Bioinform. 12 (2011)
Mark D. McDowall, Michelle S. Scott, Geoffrey J. Barton
Human protein-protein interaction prediction. BMC Bioinform. 11 (S-10) (2010)
Michelle S. Scott, Fabio Avolio, Motoharu Ono, Angus I. Lamond, Geoffrey J. Barton
Human miRNA Precursors with Box H/ACA snoRNA Features. PLoS Comput. Biol. 5 (9) (2009)
Mark D. McDowall, Michelle S. Scott, Geoffrey J. Barton
PIPs: human protein-protein interaction prediction database. Nucleic Acids Res. 37 (Database-Issue) (2009)
Michelle S. Scott, Geoffrey J. Barton
Probabilistic prediction and ranking of human protein-protein interactions. BMC Bioinform. 8 (2007)
Michelle S. Scott, Geoffrey J. Barton
Prediction and ranking of human protein-protein interactions within a Bayesian framework. BMC Syst. Biol. 1 (S-1) (2007)
Michelle S. Scott, Sara J. Calafell, David Y. Thomas, Michael T. Hallett
Refining Protein Subcellular Localization. PLoS Comput. Biol. 1 (6) (2005)
Michelle S. Scott, Guoqing Lu, Michael T. Hallett, David Y. Thomas
The Hera database and its use in the characterization of endoplasmic reticulum proteins. Bioinform. 20 (6) (2004)