Jamie J. Cannone

Publication Activity (10 Years)

Years Active: 2002-2021
Publications (10 Years): 2

Top Topics

Multiple Sequence Alignment

Secondary Structure

Computational Biology

Top Venues

Nucleic Acids Res.

BMC Syst. Biol.

Publications

Blake A. Sweeney, Anton I. Petrov, Carlos Eduardo Ribas, Robert D. Finn, Alex Bateman, Maciej Szymanski, Wojciech M. Karlowski, Stefan E. Seemann, Jan Gorodkin, Jamie J. Cannone, Robin Ray Gutell, Simon Kay, Steven J. Marygold, Gilberto dos Santos, Adam Frankish, Jonathan M. Mudge, Ruth Barshir, Simon Fishilevich, Patricia P. Chan, Todd M. Lowe, Ruth L. Seal, Elspeth A. Bruford, Simona Panni, Pablo Porras, Dimitra Karagkouni, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Pieter-Jan Volders, Pieter Mestdagh, Sam Griffiths-Jones, Bastian Fromm, Kevin J. Peterson, Ioanna Kalvari, Eric P. Nawrocki, Anton S. Petrov, Shuai Weng, Philia Bouchard-Bourelle, Michelle S. Scott, Lauren M. Lui, David Hoksza, Ruth C. Lovering, Barbara Kramarz, Prita Mani, Sridhar Ramachandran, Zasha Weinberg
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Res. 49 (Database-Issue) (2021)
Jamie J. Cannone, Blake A. Sweeney, Anton I. Petrov, Robin Ray Gutell, Craig L. Zirbel, Neocles Leontis
R3D-2-MSA: the RNA 3D structure-to-multiple sequence alignment server. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Lei Shang, David P. Gardner, Weijia Xu, Jamie J. Cannone, Daniel P. Miranker, Stuart Ozer, Robin Ray Gutell
Two accurate sequence, structure, and phylogenetic template-based RNA alignment systems. BMC Syst. Biol. 7 (S-4) (2013)
David P. Gardner, Weijia Xu, Daniel P. Miranker, Stuart Ozer, Jamie J. Cannone, Robin Ray Gutell
An accurate scalable template-based alignment algorithm. BIBM (2012)
Weijia Xu, Ame Wongsa, Jung Lee, Lei Shang, Jamie J. Cannone, Robin Ray Gutell
RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure. BIBM (2011)
Kishore J. Doshi, Jamie J. Cannone, Christian W. Cobaugh, Robin Ray Gutell
Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. BMC Bioinform. 5 (2004)
Jamie J. Cannone, Sankar Subramanian, Murray N. Schnare, James R. Collett, Lisa M. D'Souza, Yushi Du, Brian Feng, Nan Lin, Lakshmi V. Madabusi, Kirsten M. Müller, Nupur Pande, Zhidi Shang, Nan Yu, Robin Ray Gutell
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction. BMC Bioinform. 3 (2002)
Jamie J. Cannone, Sankar Subramanian, Murray N. Schnare, James R. Collett, Lisa M. D'Souza, Yushi Du, Brian Feng, Nan Lin, Lakshmi V. Madabusi, Kirsten M. Müller, Nupur Pande, Zhidi Shang, Nan Yu, Robin Ray Gutell
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinform. 3 (2002)