An accurate scalable template-based alignment algorithm.
David P. GardnerWeijia XuDaniel P. MirankerStuart OzerJamie J. CannoneRobin Ray GutellPublished in: BIBM (2012)
Keyphrases
- cost function
- high accuracy
- computationally efficient
- computational complexity
- single pass
- dynamic programming
- experimental evaluation
- selection algorithm
- detection algorithm
- improved algorithm
- np hard
- preprocessing
- similarity measure
- clustering method
- convergence rate
- times faster
- particle swarm optimization
- worst case
- recognition algorithm
- sequence alignment
- segmentation algorithm
- theoretical analysis
- genetic algorithm
- probabilistic model
- computational cost
- k means
- search space
- objective function
- decision trees