Lenwood S. Heath

Publication Activity (10 Years)

Years Active: 1984-2022
Publications (10 Years): 15

Top Topics

Representative Samples

Frequent Subsequences

Regulatory Elements

Top Venues

J. Comput. Biol.

Publications

Reza Mazloom, Leighton Pritchard, C. Titus Brown, Boris A. Vinatzer, Lenwood S. Heath
LINgroups as a principled approach to compare and integrate multiple bacterial taxonomies. BCB (2022)
Gustavo A. Arango-Argoty, Lenwood S. Heath, Amy Pruden, Peter J. Vikesland, Liqing Zhang
MetaMLP: A Fast Word Embedding Based Classifier to Profile Target Gene Databases in Metagenomic Samples. J. Comput. Biol. 28 (11) (2021)
Xiao Liang, Kyle Akers, Ishi Keenum, Lauren Wind, Suraj Gupta, Chaoqi Chen, Reem Aldaihani, Amy Pruden, Liqing Zhang, Katharine F. Knowlton, Kang Xia, Lenwood S. Heath
AgroSeek: a system for computational analysis of environmental metagenomic data and associated metadata. BMC Bioinform. 22 (1) (2021)
Long Tian, Chengjie Huang, Reza Mazloom, Lenwood S. Heath, Boris A. Vinatzer
LINbase: a web server for genome-based identification of prokaryotes as members of crowdsourced taxa. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Gustavo A. Arango-Argoty, G. K. P. Guron, Emily Garner, M. V. Riquelme, Lenwood S. Heath, Amy Pruden, Peter J. Vikesland, Liqing Zhang
ARGminer: a web platform for the crowdsourcing-based curation of antibiotic resistance genes. Bioinform. 36 (9) (2020)
Gustavo A. Arango-Argoty, Lenwood S. Heath, Amy Pruden, Peter J. Vikesland, Liqing Zhang
A Fast Word Embedding Based Classifier to Profile Target Gene Databases in Metagenomic Samples. ICCABS (2020)
Yanshen Yang, Jeffrey A. Robertson, Zhen Guo, Jake Martinez, Christy A. Coghlan, Lenwood S. Heath
MCAT: Motif Combining and Association Tool. J. Comput. Biol. 26 (1) (2019)
Haitham Elmarakeby, Mostafa Arefiyan, Elijah Myers, Song Li, Ruth Grene, Lenwood S. Heath
Beacon Editor: Capturing Signal Transduction Pathways Using the Systems Biology Graphical Notation Activity Flow Language. J. Comput. Biol. 24 (12) (2017)
Malay Chakrabarti, Lenwood S. Heath, Naren Ramakrishnan
New methods to generate massive synthetic networks. CoRR (2017)
Doaa Altarawy, Fatma-Elzahraa Eid, Lenwood S. Heath
PEAK: Integrating Curated and Noisy Prior Knowledge in Gene Regulatory Network Inference. J. Comput. Biol. 24 (9) (2017)
Lenwood S. Heath, Héctor Corrada Bravo, Mario Cáccamo, Michael Schatz
Bioinformatics of DNA [Scanning the Issue]. Proc. IEEE 105 (3) (2017)
Hanaa Torkey, Lenwood S. Heath, Mahmoud ElHefnawi
MicroTarget: MicroRNA target gene prediction approach with application to breast cancer. J. Bioinform. Comput. Biol. 15 (4) (2017)
Tridib Dutta, Lenwood S. Heath, V. S. Anil Kumar, Madhav V. Marathe
Labeled cuts in graphs. Theor. Comput. Sci. 648 (2016)
Fatma-Elzahraa Eid, Mahmoud ElHefnawi, Lenwood S. Heath
DeNovo: virus-host sequence-based protein-protein interaction prediction. Bioinform. 32 (8) (2016)
Eman Badr, Lenwood S. Heath
CoSREM: a graph mining algorithm for the discovery of combinatorial splicing regulatory elements. BMC Bioinform. 16 (2015)
Eman Badr, Lenwood S. Heath
Identifying Splicing Regulatory Elements with de Bruijn Graphs. J. Comput. Biol. 21 (12) (2014)
Proceso L. Fernandez, Lenwood S. Heath, Naren Ramakrishnan, Michael Tan, John Paul C. Vergara
Mining Posets from Linear Orders. Discret. Math. Algorithms Appl. 5 (4) (2013)
Zanoni Dias, Ulisses Dias, Lenwood S. Heath, João C. Setubal
Sorting genomes using almost-symmetric inversions. SAC (2012)
Liqing Zhang, Layne T. Watson, Lenwood S. Heath
A Network of SCOP Hidden Markov Models and Its Analysis. BMC Bioinform. 12 (2011)
Nahla A. Belal, Lenwood S. Heath
A Theoretical Model for Whole Genome Alignment. J. Comput. Biol. 18 (5) (2011)
Naren Sundaravaradan, K. S. M. Tozammel Hossain, Vandana Sreedharan, Douglas J. Slotta, John Paul C. Vergara, Lenwood S. Heath, Naren Ramakrishnan
Extracting temporal signatures for comprehending systems biology models. KDD (2010)
Lenwood S. Heath, Allan A. Sioson
Semantics of Multimodal Network Models. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (2) (2009)
Lenwood S. Heath, Allan A. Sioson
Multimodal Networks: Structure and Operations. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (2) (2009)
Mark J. Lawson, Lenwood S. Heath, Naren Ramakrishnan, Liqing Zhang
Using Cost-Sensitive Learning to Determine Gene Conversions. ICIC (2) (2008)
Amrita Pati, Ying Jin, Karsten Klage, Richard F. Helm, Lenwood S. Heath, Naren Ramakrishnan
data sources using compositional data mining. Nucleic Acids Res. 36 (Database-Issue) (2008)
Lenwood S. Heath, Amrita Pati
Genomic Signatures from DNA Word Graphs. ISBRA (2007)
Lenwood S. Heath, Amrita Pati
Genomic Signatures in De Bruijn Chains. WABI (2007)
Lenwood S. Heath, Amrita Pati
Predicting Markov Chain Order in Genomic Sequences. BIBM (2007)
Allan A. Sioson, Shrinivasrao P. Mane, Pinghua Li, Wei Sha, Lenwood S. Heath, Hans J. Bohnert, Ruth Grene
The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison. BMC Bioinform. 7 (2006)
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. Heath, Ruth Grene, T. M. Murali
XcisClique: analysis of regulatory bicliques. BMC Bioinform. 7 (2006)
Dennis J. Brueni, Lenwood S. Heath
The PMU Placement Problem. SIAM J. Discret. Math. 19 (3) (2005)
John C. Gordon, Jonathan B. Myers, Timothy Folta, Valia Shoja, Lenwood S. Heath, Alexey Onufriev
s and adding missing hydrogens to macromolecules. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Lenwood S. Heath, Nicholas A. Loehr
New algorithms for generating Conway polynomials over finite fields. J. Symb. Comput. 38 (2) (2004)
Lenwood S. Heath, John Paul C. Vergara
Sorting by Short Swaps. J. Comput. Biol. 10 (5) (2003)
Allan A. Sioson, Jonathan I. Watkinson, Cecilia Vasquez-Robinet, Margaret Ellis, Maulik Shukla, Deept Kumar, Naren Ramakrishnan, Lenwood S. Heath, Ruth Grene, Boris I. Chevone, Karen Kafadar, Layne T. Watson
Expresso and Chips: Creating a Next Generation Microarray Experiment Management System. IPDPS (2003)
Lenwood S. Heath
Networks in Bioinformatics. ISPAN (2002)
Lenwood S. Heath, Naren Ramakrishnan
The Emerging Landscape of Bioinformatics Software Systems. Computer 35 (7) (2002)
Edward L. Green, Lenwood S. Heath, Craig A. Struble
Constructing Homomorphism Spaces and Endomorphism Rings. J. Symb. Comput. 32 (1/2) (2001)
Joseph L. Ganley, Lenwood S. Heath
The pagenumber of k-trees is O(k). Discret. Appl. Math. 109 (3) (2001)
Lenwood S. Heath, Naren Ramakrishnan, Ronald R. Sederoff, Ross W. Whetten, Boris I. Chevone, Craig A. Struble, Vincent Y. Jouenne, Dawei Chen, Leonel van Zyl, Ruth G. Alscher
The Expresso Microarray Experiment Management System: The Functional Genomics of Stress Responses in Loblolly Pine CoRR (2001)
Edward L. Green, Lenwood S. Heath, Craig A. Struble
Constructing endomorphism rings via duals. ISSAC (2000)
Lenwood S. Heath, John Paul C. Vergara
Sorting by Short Block-Moves. Algorithmica 28 (3) (2000)
Lenwood S. Heath, Nicholas A. Loehr
New Algorithms for Generating Conway Polynomials Over Finite Fields. SODA (1999)
Gerard P. Brunick, Edward L. Green, Lenwood S. Heath, Craig A. Struble
Efficient Construction of Drinfel'd Doubles. ISSAC (1999)
Lenwood S. Heath, Sriram V. Pemmaraju
Stack and Queue Layouts of Directed Acyclic Graphs: Part II. SIAM J. Comput. 28 (5) (1999)
Lenwood S. Heath, Sriram V. Pemmaraju, Ann N. Trenk
Stack and Queue Layouts of Directed Acyclic Graphs: Part I. SIAM J. Comput. 28 (4) (1999)
Lenwood S. Heath, John Paul C. Vergara
Sorting by Bounded Block-moves. Discret. Appl. Math. 88 (1-3) (1998)
Lenwood S. Heath, John Paul C. Vergara
Edge-packing Planar Graphs by Cyclic Graphs. Discret. Appl. Math. 81 (1-3) (1998)
Lenwood S. Heath, John Paul C. Vergara
Edge-Packing in Planar Graphs. Theory Comput. Syst. 31 (6) (1998)
Joseph L. Ganley, Lenwood S. Heath
An Experimental Evaluation of Local Search Heuristics for Graph Partitioning. Computing 60 (2) (1998)
Edward L. Green, Lenwood S. Heath, Benjamin J. Keller
Opal: A System for Computing Noncommutative Gröbner Bases. RTA (1997)
Lenwood S. Heath
Graph Embeddings and Simplicial Maps. Theory Comput. Syst. 30 (1) (1997)
Lenwood S. Heath, Sriram V. Pemmaraju
Stack and Queue Layouts of Posets. SIAM J. Discret. Math. 10 (4) (1997)
Lucy T. Nowell, Robert K. France, Deborah Hix, Lenwood S. Heath, Edward A. Fox
Visualizing Search Results: Some Alternatives to Query-Document Similarity. SIGIR (1996)
Clifford A. Shaffer, Lenwood S. Heath, Jun Yang
Using the Swan data structure visualization system for computer science education. SIGCSE (1996)
Lenwood S. Heath, Deborah Hix, Lucy T. Nowell, William C. Wake, Guillermo A. Averboch, Eric Labow, Scott A. Guyer, Dennis J. Brueni, Robert K. France, Kaushal Dalal, Edward A. Fox
Envision: A User-Centered Database of Computer Science Literature. Commun. ACM 38 (4) (1995)
Lenwood S. Heath, Sriram V. Pemmaraju
Recognizing Leveled-Planar Dags in Linear Time. Graph Drawing (1995)
Jun Yang, Clifford A. Shaffer, Lenwood S. Heath
SWAN: A Data Structure Visualization System. Graph Drawing (1995)
Joseph L. Ganley, Lenwood S. Heath
Optimal and Random Partitions of Random Graphs. Comput. J. 37 (7) (1994)
Lenwood S. Heath, Sriram V. Pemmaraju
New Results for the Minimum Weight Triangulation Problem. Algorithmica 12 (6) (1994)
Joseph L. Ganley, Lenwood S. Heath
Heuristics for laying out information graphs. Computing 52 (4) (1994)
Dennis J. Brueni, Baziley T. Cross, Edward A. Fox, Lenwood S. Heath, Deborah Hix, Lucy T. Nowell, William C. Wake
What If There Were Desktop Access to the Computer Science Literature? ACM Conference on Computer Science (1993)
Edward A. Fox, Deborah Hix, Lucy T. Nowell, Dennis J. Brueni, William C. Wake, Lenwood S. Heath, Durgesh Rao
Users, User Interfaces, and Objects: Envision, a Digital Library. J. Am. Soc. Inf. Sci. 44 (8) (1993)
Lenwood S. Heath
Lower Bounds for Graph Embeddings via Algebraic Topology. SPAA (1993)
Clifford A. Shaffer, Ramana Juvvadi, Lenwood S. Heath
Generalized comparison of quadtree and bintree storage requirements. Image Vis. Comput. 11 (7) (1993)
Lenwood S. Heath, Praveen K. Paripati, John W. Roach
Representing Polyhedra: Faces Are Better Than Vertices. Comput. Geom. 3 (1993)
Edward A. Fox, Qi Fan Chen, Lenwood S. Heath
A Faster Algorithm for Constructing Minimal Perfect Hash Functions. SIGIR (1992)
Edward A. Fox, Lenwood S. Heath, Qi Fan Chen, Amjad M. Daoud
Practical Minimal Perfect Hash Functions for Large Databases. Commun. ACM 35 (1) (1992)
Lenwood S. Heath, Arnold L. Rosenberg
Laying out Graphs Using Queues. SIAM J. Comput. 21 (5) (1992)
Lenwood S. Heath, Frank Thomson Leighton, Arnold L. Rosenberg
Comparing Queues and Stacks as Mechanisms for Laying out Graphs. SIAM J. Discret. Math. 5 (3) (1992)
Lenwood S. Heath, Sorin Istrail
The Pagenumber of Genus g Graphs is O(g). J. ACM 39 (3) (1992)
Lenwood S. Heath
Edge Coloring Planar Graphs with Two Outerplanar Subgraphs. SODA (1991)
Lenwood S. Heath, Sriram V. Pemmaraju, Ann N. Trenk
Stack and Queue Layouts of Directed Planar Graphs. Planar Graphs (1991)
Edward A. Fox, Qi Fan Chen, Amjad M. Daoud, Lenwood S. Heath
Order-Preserving Minimal Perfect Hash Functions and Information Retrieval. ACM Trans. Inf. Syst. 9 (3) (1991)
Lenwood S. Heath
Covering a Set with Arithmetic Progressions is NP-Complete. Inf. Process. Lett. 34 (6) (1990)
Edward A. Fox, Qi Fan Chen, Amjad M. Daoud, Lenwood S. Heath
Order Preserving Minimal Perfect Hash Functions and Information Retrieval. SIGIR (1990)
David S. Greenberg, Lenwood S. Heath, Arnold L. Rosenberg
Optimal Embeddings of Butterfly-Like Graphs in the Hypercube. Math. Syst. Theory 23 (1) (1990)
Edward A. Fox, Qi Fan Chen, Lenwood S. Heath, Sanjeev Datta
A More Cost Effective Algorithm for Finding Perfect Hash Functions. ACM Conference on Computer Science (1989)
Lenwood S. Heath, Arnold L. Rosenberg, Bruce T. Smith
The physical mapping problem for parallel architectures. J. ACM 35 (3) (1988)
Lenwood S. Heath, Sorin Istrail
The Pagenumber of Genus g Graphs is O(g) STOC (1987)
Lenwood S. Heath
Embedding Planar Graphs in Seven Pages FOCS (1984)