James A. Foster

Publication Activity (10 Years)

Years Active: 1992-2022
Publications (10 Years): 6

Top Topics

Machine Learning

Special Section

Scientific Fields

Computational Approaches

Top Venues

Genet. Program. Evolvable Mach.

Publications

Tayo Obafemi-Ajayi, Andy D. Perkins, Bindu Nanduri, Donald C. Wunsch II, James A. Foster, Joan Peckham
No-boundary thinking: a viable solution to ethical data-driven AI in precision medicine. AI Ethics 2 (4) (2022)
Gerard Kian-Meng Goh, A. Keith Dunker, James A. Foster, Vladimir N. Uversky
Feasibility of the vaccine development for SARS-CoV-2 and other viruses using the shell disorder analysis. PSB (2021)
Ilya Y. Zhbannikov, Samuel S. Hunter, James A. Foster, Matthew L. Settles
SeqyClean: A Pipeline for High-throughput Sequence Data Preprocessing. BCB (2017)
James A. Foster
Taking "biology" just seriously enough: Commentary on "On the Mapping of Genotype to Phenotype in Evolutionary Algorithms" by Peter A. Whigham, Grant Dick, and James Maclaurin. Genet. Program. Evolvable Mach. 18 (3) (2017)
Wolfgang Banzhaf, Bert Baumgaertner, Guillaume Beslon, René Doursat, James A. Foster, Barry McMullin, Vinícius Veloso de Melo, Thomas Miconi, Lee Spector, Susan Stepney, Roger White
Defining and simulating open-ended novelty: requirements, guidelines, and challenges. Theory Biosci. 135 (3) (2016)
Casey S. Greene, James A. Foster, Bruce A. Stanton, Deborah A. Hogan, Yana Bromberg
Computational Approaches to Study Microbes and Microbiomes. PSB (2016)
Daniel Beck, James A. Foster
Machine learning classifiers provide insight into the relationship between microbial communities and bacterial vaginosis. BioData Min. 8 (2015)
Ilya Y. Zhbannikov, James A. Foster
MetAmp: combining amplicon data from multiple markers for OTU analysis. Bioinform. 31 (11) (2015)
Daniel Beck, Christopher Dennis, James A. Foster
Seed: a user-friendly tool for exploring and visualizing microbial community data. Bioinform. 31 (4) (2015)
Kristine A. Pattin, Anna C. Greene, Russ B. Altman, Lawrence E. Hunter, David A. Ross, James A. Foster, Jason H. Moore
Building the Next Generation of Quantitative Biologists. Pacific Symposium on Biocomputing (2014)
Yolanda S. Baker, Rajeev Agrawal, James A. Foster, Daniel Beck, Gerry V. Dozier
Detecting bacterial vaginosis using machine learning. ACM Southeast Regional Conference (2014)
Yolanda S. Baker, Rajeev Agrawal, James A. Foster, Daniel Beck, Gerry V. Dozier
Applying machine learning techniques in detecting Bacterial Vaginosis. ICMLC (2014)
Joi Carter, Daniel Beck, Henry Williams, Gerry V. Dozier, James A. Foster
GA-based selection of vaginal microbiome features associated with bacterial vaginosis. GECCO (2014)
James A. Foster
Introduction to special section: Best of EuroGP/EvoBio. Genet. Program. Evolvable Mach. 14 (4) (2013)
Ilya Y. Zhbannikov, Joseph W. Brown, James A. Foster
decisivatoR: an R infrastructure package that addresses the problem of phylogenetic decisiveness. BCB (2013)
Wade K. Copeland, Vandhana Krishnan, Daniel Beck, Matt Settles, James A. Foster, Kyu-Chul Cho, Mitch Day, Roxana Hickey, Ursel M. E. Schütte, Xia Zhou, Christopher J. Williams, Larry J. Forney, Zaid Abdo
mcaGUI: microbial community analysis R-Graphical User Interface (GUI). Bioinform. 28 (16) (2012)
John Bunge, Dankmar Böhning, Heather K. Allen, James A. Foster
Estimating Population Diversity with Unreliable Low Frequency Counts. Pacific Symposium on Biocomputing (2012)
Sara Silva, James A. Foster
Guest editorial: special issue on selected papers from the European conference on genetic programming. Genet. Program. Evolvable Mach. 13 (3) (2012)
John Bunge, Linda Woodard, Dankmar Böhning, James A. Foster, Sean Connolly, Heather K. Allen
Estimating population diversity with CatchAll. Bioinform. 28 (7) (2012)
James A. Foster, John Bunge, Jack A. Gilbert, Jason H. Moore
Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life. Briefings Bioinform. 13 (4) (2012)
James A. Foster, Jason H. Moore, Jack A. Gilbert, John Bunge
Session introduction. Pacific Symposium on Biocomputing (2012)
Daniel Beck, Matt Settles, James A. Foster
OTUbase: an R infrastructure package for operational taxonomic unit data. Bioinform. 27 (12) (2011)
James A. Foster, Jason H. Moore
Session Introduction. Pacific Symposium on Biocomputing (2011)
Vic Norris, Abdallah Zemirline, Patrick Amar, Jean Nicolas Audinot, Pascal Ballet, Eshel Ben-Jacob, Gilles Bernot, Guillaume Beslon, Armelle Cabin, Eric Fanchon, Jean-Louis Giavitto, Nicolas Glade, Patrick Greussay, Yohann Grondin, James A. Foster, Guillaume Hutzler, Jürgen Jost, François Képès, Olivier Michel, Franck Molina, Jacqueline Signorini, Pasquale Stano, Alain R. Thierry
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing. Theory Biosci. 130 (3) (2011)
Luke Sheneman, Jason Evans, James A. Foster
Clearcut: a fast implementation of relaxed neighbor joining. Bioinform. 22 (22) (2006)
Luke Sheneman, James A. Foster
Estimating the destructiveness of crossover on binary tree representations. GECCO (2006)
James A. Foster, Erick Cantú-Paz
Introduction. Genet. Program. Evolvable Mach. 6 (1) (2005)
Conrad Shyu, Luke Sheneman, James A. Foster
Multiple Sequence Alignment with Evolutionary Computation. Genet. Program. Evolvable Mach. 5 (2) (2004)
Luke Sheneman, James A. Foster
Evolving Better Multiple Sequence Alignments. GECCO (1) (2004)
Wolfgang Banzhaf, James A. Foster
Editorial Introduction. Genet. Program. Evolvable Mach. 5 (2) (2004)
Michael L. Harrison, James A. Foster
Improving the Survivability of a Simple Evolved Circuit through Co-evolution. Evolvable Hardware (2004)
Michael L. Harrison, James A. Foster
Co-evolving Faults to Improve the Fault Tolerance of Sorting Networks. EuroGP (2004)
Kosuke Imamura, Terence Soule, Robert B. Heckendorn, James A. Foster
Behavioral Diversity and a Probabilistically Optimal GP Ensemble. Genet. Program. Evolvable Mach. 4 (3) (2003)
Conrad Shyu, James A. Foster
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm. GECCO (2003)
Rob Shepherd, James A. Foster
Inherent Fault Tolerance in Evolved Sorting Networks. GECCO (2003)
Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster
How Random Generator Quality Impacts GA Performance. GECCO (2002)
Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster
A Genetic Algorithm-specific Test Of Random Generator Quality. GECCO (2002)
Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster
N-Version Genetic Programming via Fault Masking. EuroGP (2002)
Conrad Shyu, James A. Foster, Larry J. Forney
Electronic Polymerase Chain Reaction (EPCR) Search Algorithm. CSB (2002)
Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster
Abstention Reduces Errors - decision Abstaining N-version Genetic Programming. GECCO (2002)
Conrad Shyu, James A. Foster, K. X. Liao, S. J. Bent, K. Sale, Larry J. Forney, Terence Soule
MiCA: Web-Based Computational Tools for the Analysis of Microbial Community Structure and Compisition Based on T-RFLP of 16S rRNA Gene. CSB (2002)
James A. Foster
Review: Discipulus: A Commercial Genetic Programming System. Genet. Program. Evolvable Mach. 2 (2) (2001)
Bart Rylander, Terence Soule, James A. Foster
Computational Complexity, Genetic Programming, and Implications. EuroGP (2001)
Joe Dumoulin, James A. Foster, James F. Frenzel, Steve McGrew
Special Purpose Image Convolution with Evolvable Hardware. EvoWorkshops (2000)
Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster
Size versus Robustness in Evolved Sorting Networks: Is Bigger Better? Evolvable Hardware (2000)
Hunter S. Snevily, James A. Foster
The 2-Pebbling Property and a Conjecture of Graham's. Graphs Comb. 16 (2) (2000)
Bart Rylander, Terence Soule, James A. Foster, Jim Alves-Foss
Quantum Genetic Algorithms. GECCO (2000)
Kosuke Imamura, James A. Foster, Axel W. Krings
The Test Vector Problem and Limitations to Evolving Digital Circuits. Evolvable Hardware (2000)
Gerard Kian-Meng Goh, James A. Foster
Evolving Molecules for Drug Design Using Genetic Algorithms via Molecular Trees. GECCO (2000)
Bart Rylander, James A. Foster
GA Hard Problems. GECCO (2000)
Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster
Representation and Robustness for Evolved Sorting Networks. Evolvable Hardware (1999)
John Determan, James A. Foster
Using chaos in genetic algorithms. CEC (1999)
Brad Harvey, James A. Foster, Deborah A. Frincke
Towards Byte Code Genetic Programming. GECCO (1999)
Terence Soule, James A. Foster
Effects of Code Growth and Parsimony Pressure on Populations in Genetic Programming. Evol. Comput. 6 (4) (1998)
Mark M. Meysenburg, James A. Foster
The Quality of Pseudo-Random Number Generations and Simple Genetic Algorithm Performance. ICGA (1997)
Terence Soule, James A. Foster
Genetic Algorithm Hardness Measures Applied to the Maximum Clique Problem. ICGA (1997)
James A. Foster, Michael Barnett, Karen Van Houten, Luke Sheneman
(In)Formal Methods: Teaching Program Derivation Via the Moore Method. Comput. Sci. Educ. 6 (1) (1995)
James A. Foster
The Generic Oracle Hypothesis is False. Inf. Process. Lett. 45 (2) (1993)
James A. Foster
The Generic Oracle Hypothesis Fails. ICCI (1992)