Zohar Yakhini

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 31

Top Topics

Linear Regression

Privacy Preserving

Top Venues

IACR Cryptol. ePrint Arch.

Nucleic Acids Res.

Publications

Daniella Bar-Lev, Tuvi Etzion, Eitan Yaakobi, Zohar Yakhini
Representing Information on DNA using Patterns Induced by Enzymatic Labeling. CoRR (2024)
Alona Levy-Jurgenson, Zohar Yakhini
Generative Topological Networks. CoRR (2024)
Nir Weingarten, Zohar Yakhini, Moshe Butman, Ran Gilad-Bachrach
Tighter Bounds on the Information Bottleneck with Application to Deep Learning. CoRR (2024)
Idan Cohen, Aviv Yehezkel, Zohar Yakhini
Efficient Random Sampling from Very Large Databases. DEXA (1) (2024)
Omer Sabary, Inbal Preuss, Ryan Gabrys, Zohar Yakhini, Leon Anavy, Eitan Yaakobi
Error-Correcting Codes for Combinatorial DNA Composite. CoRR (2024)
Roy Shafir, Omer Sabary, Leon Anavy, Eitan Yaakobi, Zohar Yakhini
Sequence Design and Reconstruction Under the Repeat Channel in Enzymatic DNA Synthesis. IEEE Trans. Commun. 72 (2) (2024)
Adi Akavia, Ben Galili, Hayim Shaul, Mor Weiss, Zohar Yakhini
Privacy Preserving Feature Selection for Sparse Linear Regression. Proc. Priv. Enhancing Technol. 2024 (1) (2024)
Inbal Preuss, Ben Galili, Zohar Yakhini, Leon Anavy
Sequencing Coverage Analysis for Combinatorial DNA-Based Storage Systems. IEEE Trans. Mol. Biol. Multi Scale Commun. 10 (2) (2024)
Adi Akavia, Ben Galili, Hayim Shaul, Mor Weiss, Zohar Yakhini
Efficient Privacy-Preserving Viral Strain Classification via k-mer Signatures and FHE. CSF (2023)
Adi Akavia, Ben Galili, Hayim Shaul, Mor Weiss, Zohar Yakhini
Privacy Preserving Feature Selection for Sparse Linear Regression. IACR Cryptol. ePrint Arch. 2023 (2023)
Adi Akavia, Ben Galili, Hayim Shaul, Mor Weiss, Zohar Yakhini
Efficient Privacy-Preserving Viral Strain Classification via k-mer Signatures and FHE. IACR Cryptol. ePrint Arch. 2023 (2023)
Chloé Benmussa, Jessica R. Cauchard, Zohar Yakhini
Generating Alerts from Breathing Pattern Outliers. Sensors 22 (16) (2022)
Alona Levy-Jurgenson, Xavier Tekpli, Zohar Yakhini
Erratum to: Assessing heterogeneity in spatial data using the HTA index with applications to spatial transcriptomics and imaging. Bioinform. 37 (22) (2021)
Alona Levy-Jurgenson, Xavier Tekpli, Zohar Yakhini
Assessing heterogeneity in spatial data using the HTA index with applications to spatial transcriptomics and imaging. Bioinform. 37 (21) (2021)
Shay Ben-Elazar, Miriam Ragle Aure, Kristin Jonsdottir, Suvi-Katri Leivonen, Vessela N. Kristensen, Emiel A. M. Janssen, Kristine Kleivi Sahlberg, Ole Christian Lingjærde, Zohar Yakhini
miRNA normalization enables joint analysis of several datasets to increase sensitivity and to reveal novel miRNAs differentially expressed in breast cancer. PLoS Comput. Biol. 17 (2) (2021)
Alon Oring, Zohar Yakhini, Yacov Hel-Or
Autoencoder Image Interpolation by Shaping the Latent Space. ICML (2021)
Roy Shafir, Omer Sabary, Leon Anavy, Eitan Yaakobi, Zohar Yakhini
Sequence Reconstruction Under Stutter Noise in Enzymatic DNA Synthesis. ITW (2021)
Omer Sabary, Yoav Orlev, Roy Shafir, Leon Anavy, Eitan Yaakobi, Zohar Yakhini
SOLQC: Synthetic Oligo Library Quality Control tool. Bioinform. 37 (5) (2021)
Ben Galili, Anat Samohi, Zohar Yakhini
On the stability of log-rank test under labeling errors. Bioinform. 37 (22) (2021)
Ben Galili, Anat Samohi, Zohar Yakhini
On the stability of log-rank test under labeling errors. Bioinform. 37 (23) (2021)
Anat Bremler-Barr, Haim Levy, Zohar Yakhini
IoT or NoT: Identifying IoT Devices in a Short Time Scale. NOMS (2020)
Alon Oring, Zohar Yakhini, Yacov Hel-Or
Faithful Autoencoder Interpolation by Shaping the Latent Space. CoRR (2020)
Alona Levy-Jurgenson, Xavier Tekpli, Vessela N. Kristensen, Zohar Yakhini
Predicting Methylation from Sequence and Gene Expression Using Deep Learning with Attention. AlCoB (2019)
Adi Akavia, Hayim Shaul, Mor Weiss, Zohar Yakhini
Linear-Regression on Packed Encrypted Data in the Two-Server Model. IACR Cryptol. ePrint Arch. 2019 (2019)
Anat Bremler-Barr, Haim Levy, Zohar Yakhini
IoT or NoT: Identifying IoT Devices in a ShortTime Scale. CoRR (2019)
Adi Akavia, Hayim Shaul, Mor Weiss, Zohar Yakhini
Linear-Regression on Packed Encrypted Data in the Two-Server Model. WAHC@CCS (2019)
Maya Polishchuk, Inbal Paz, Zohar Yakhini, Yael Mandel-Gutfreund
SMARTIV: combined sequence and structure de-novo motif discovery for in-vivo RNA binding data. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Dalia Cohn-Alperovich, Alona Rabner, Ilona Kifer, Yael Mandel-Gutfreund, Zohar Yakhini
Mutual enrichment in aggregated ranked lists with applications to gene expression regulation. Bioinform. 33 (3) (2017)
Ilona Kifer, Rui Mamede Branca, Amir Ben-Dor, Linhui Zhai, Ping Xu, Janne Lehtiö, Zohar Yakhini
Optimizing Analytical Depth and Cost Efficiency of IEF-LC/MS Proteomics. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (2) (2017)
Shay Ben-Elazar, Benny Chor, Zohar Yakhini
Extending partial haplotypes to full genome haplotypes using chromosome conformation capture data. Bioinform. 32 (17) (2016)
Dalia Cohn-Alperovich, Alona Rabner, Ilona Kifer, Yael Mandel-Gutfreund, Zohar Yakhini
Mutual enrichment in aggregated ranked lists with applications to gene expression regulation. Bioinform. 32 (17) (2016)
Matan Drory Retwitzer, Maya Polishchuk, Elena Churkin, Ilona Kifer, Zohar Yakhini, Danny Barash
RNAPattMatch: a web server for RNA sequence/structure motif detection based on pattern matching with flexible gaps. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Israel Steinfeld, Roy Navon, Michael L. Creech, Zohar Yakhini, Anya Tsalenko
ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types. Bioinform. 31 (10) (2015)
Limor Leibovich, Zohar Yakhini
Mutual enrichment in ranked lists and the statistical assessment of position weight matrix motifs. Algorithms Mol. Biol. 9 (2014)
Ilona Kifer, Amir Ben-Dor, Zohar Yakhini, Rui Mamede Branca, Janne Lehtiö, Ping Xu
Optimizing analytical depth and cost efficiency of IEF-LC/MS proteomics. BIBM (2014)
Nir Friedman, Zohar Yakhini
On the Sample Complexity of Learning Bayesian Networks CoRR (2013)
Limor Leibovich, Inbal Paz, Zohar Yakhini, Yael Mandel-Gutfreund
DRIMust: a web server for discovering rank imbalanced motifs using suffix trees. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Limor Leibovich, Zohar Yakhini
Mutual Enrichment in Ranked Lists and the Statistical Assessment of Position Weight Matrix Motifs. WABI (2013)
Ari Frank, Dan Geiger, Zohar Yakhini
A Distance-Based Branch and Bound Feature Selection Algorithm CoRR (2012)
Yonatan Aumann, Moshe Lewenstein, Oren Melamud, Ron Y. Pinter, Zohar Yakhini
Dotted interval graphs. ACM Trans. Algorithms 8 (2) (2012)
Zohar Yakhini, Igor Jurisica
Cancer Computational Biology. BMC Bioinform. 12 (2011)
Eran Eden, Roy Navon, Israel Steinfeld, Doron Lipson, Zohar Yakhini
: a tool for discovery and visualization of enriched GO terms in ranked gene lists. BMC Bioinform. 10 (2009)
Israel Steinfeld, Roy Navon, Diego Ardigò, Ivana Zavaroni, Zohar Yakhini
Clinically driven semi-supervised class discovery in gene expression data. ECCB (2008)
Eran Eden, Doron Lipson, Sivan Yogev, Zohar Yakhini
Discovering Motifs in Ranked Lists of DNA Sequences. PLoS Comput. Biol. 3 (3) (2007)
Israel Steinfeld, Roy Navon, Diego Ardigò, Ivana Zavaroni, Zohar Yakhini
Semi-supervised class discovery using quantitative phenotypes - CVD as a case study. BMC Bioinform. 8 (S-8) (2007)
Oleg Rokhlenko, Ydo Wexler, Zohar Yakhini
Similarities and differences of gene expression in yeast stress conditions. Bioinform. 23 (2) (2007)
Doron Lipson, Zohar Yakhini, Yonatan Aumann
Optimization of probe coverage for high-resolution oligonucleotide aCGH. Bioinform. 23 (2) (2007)
Nir Yosef, Zohar Yakhini, Anya Tsalenko, Vessela N. Kristensen, Anne-Lise Børresen-Dale, Eytan Ruppin, Roded Sharan
A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data. Bioinform. 23 (2) (2007)
Amir Ben-Dor, Doron Lipson, Anya Tsalenko, Mark Reimers, Lars O. Baumbusch, Michael T. Barrett, John N. Weinstein, Anne-Lise Børresen-Dale, Zohar Yakhini
Framework for Identifying Common Aberrations in DNA Copy Number Data. RECOMB (2007)
Chaya Ben-Zaken Zilberstein, Michal Ziv-Ukelson, Ron Y. Pinter, Zohar Yakhini
A High-Throughput Approach for Associating MicroRNAs with Their Activity Conditions. J. Comput. Biol. 13 (2) (2006)
Anya Tsalenko, Roded Sharan, Vessela N. Kristensen, Hege Edvardsen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini
Analysis of Snp-expression Association Matrices. J. Bioinform. Comput. Biol. 4 (2) (2006)
Doron Lipson, Yonatan Aumann, Amir Ben-Dor, Nathan Linial, Zohar Yakhini
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis. J. Comput. Biol. 13 (2) (2006)
Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Geiger
Finding Approximate Tandem Repeats in Genomic Sequences. J. Comput. Biol. 12 (7) (2005)
Robert Kincaid, Amir Ben-Dor, Zohar Yakhini
Exploratory visualization of array-based comparative genomic hybridization. Inf. Vis. 4 (3) (2005)
Yonatan Aumann, Efrat Manisterski, Zohar Yakhini
Designing optimally multiplexed SNP genotyping assays. J. Comput. Syst. Sci. 70 (3) (2005)
Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vessela N. Kristensen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini
Analysis of SNP-Expression Association Matrices. CSB (2005)
Roded Sharan, Jens Gramm, Zohar Yakhini, Amir Ben-Dor
Multiplexing Schemes for Generic SNP Genotyping Assays. J. Comput. Biol. 12 (5) (2005)
Chaya Ben-Zaken Zilberstein, Michal Ziv-Ukelson, Ron Y. Pinter, Zohar Yakhini
A High-Throughput Approach for Associating microRNAs with Their Activity Conditions. RECOMB (2005)
Doron Lipson, Yonatan Aumann, Amir Ben-Dor, Nathan Linial, Zohar Yakhini
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis. RECOMB (2005)
Yonatan Aumann, Moshe Lewenstein, Oren Melamud, Ron Y. Pinter, Zohar Yakhini
Dotted interval graphs and high throughput genotyping. SODA (2005)
Chaya Ben-Zaken Zilberstein, Eleazar Eskin, Zohar Yakhini
Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs. Regulatory Genomics (2004)
Doron Lipson, Amir Ben-Dor, Elinor Dehan, Zohar Yakhini
Joint Analysis of DNA Copy Numbers and Gene Expression Levels. WABI (2004)
Amir Ben-Dor, Tzvika Hartman, Richard M. Karp, Benno Schwikowski, Roded Sharan, Zohar Yakhini
Towards Optimally Multiplexed Applications of Universal Arrays. J. Comput. Biol. 11 (2/3) (2004)
Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Geiger
Finding approximate tandem repeats in genomic sequences. RECOMB (2004)
Roded Sharan, Amir Ben-Dor, Zohar Yakhini
Multiplexing Schemes for Generic SNP Genotyping Assays. Pacific Symposium on Biocomputing (2004)
Ari Frank, Dan Geiger, Zohar Yakhini
A Distance-Based Branch and Bound Feature Selection Algorithm. UAI (2003)
Amir Ben-Dor, Tzvika Hartman, Benno Schwikowski, Roded Sharan, Zohar Yakhini
Towards optimally multiplexed applications of universal DNA tag systems. RECOMB (2003)
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Yakhini
Discovering Local Structure in Gene Expression Data: The Order-Preserving Submatrix Problem. J. Comput. Biol. 10 (3/4) (2003)
Yonatan Aumann, Efrat Manisterski, Zohar Yakhini
Designing Optimally Multiplexed SNP Genotyping Assays. WABI (2003)
Anna Tsalenko, Amir Ben-Dor, Nancy Cox, Zohar Yakhini
Methods for Analysis and Visualization of SNP Genotype Data for Complex Diseases. Pacific Symposium on Biocomputing (2003)
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Yakhini
Discovering local structure in gene expression data: the order-preserving submatrix problem. RECOMB (2002)
Doron Lipson, Peter Webb, Zohar Yakhini
Designing Specific Oligonucleotide Probes for the Entire S. cerevisiae Transcriptome. WABI (2002)
Amir Ben-Dor, Nir Friedman, Zohar Yakhini
Class discovery in gene expression data. RECOMB (2001)
Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach Nachman, Michèl Schummer, Zohar Yakhini
Tissue classification with gene expression profiles. RECOMB (2000)
Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach Nachman, Michèl Schummer, Zohar Yakhini
Tissue Classification with Gene Expression Profiles. J. Comput. Biol. 7 (3-4) (2000)
Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Zohar Yakhini
Universal DNA tag systems: a combinatorial design scheme. RECOMB (2000)
Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Zohar Yakhini
Universal DNA Tag Systems: A Combinatorial Design Scheme. J. Comput. Biol. 7 (3-4) (2000)
Amir Ben-Dor, Ron Shamir, Zohar Yakhini
Clustering Gene Expression Patterns. J. Comput. Biol. 6 (3/4) (1999)
Amir Ben-Dor, Zohar Yakhini
Clustering gene expression patterns. RECOMB (1999)
Nir Friedman, Zohar Yakhini
On the Sample Complexity of Learning Bayesian Networks. UAI (1996)