Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs.
Chaya Ben-Zaken ZilbersteinEleazar EskinZohar YakhiniPublished in: Regulatory Genomics (2004)
Keyphrases
- rna sequences
- genome sequences
- cis regulatory
- dna sequences
- transcription factors
- genomic sequences
- biological sequences
- rna secondary structure prediction
- secondary structure
- binding sites
- transcription factor binding sites
- rna secondary structures
- sequence data
- protein sequences
- sequence analysis
- genome wide
- free energy
- gene regulation
- nucleotide sequences
- motif discovery
- genomic data
- regulatory elements
- comparative analysis
- rna molecules
- computational biology
- microarray
- dna computing
- coding regions
- dna binding
- structural motifs
- gene expression
- tandem repeats
- human genome
- protein families
- gene regulatory
- alternative splicing
- pattern discovery
- high throughput
- sequence alignment