Bernard de Bono

Publication Activity (10 Years)

Years Active: 2005-2022
Publications (10 Years): 4

Top Topics

Protein Interaction Data

Spatial Constraints

Biomedical Text

Top Venues

Frontiers Neuroinformatics

J. Biomed. Semant.

Publications

Monique Surles-Zeigler, Troy Sincomb, Thomas H. Gillespie, Bernard de Bono, Jacqueline Bresnahan, Gary M. Mawe, Jeffrey S. Grethe, Susan J. Tappan, Maci L. Heal, Maryann E. Martone
Extending and using anatomical vocabularies in the stimulating peripheral activity to relieve conditions project. Frontiers Neuroinformatics 16 (2022)
Natallia Kokash, Bernard de Bono
Knowledge Representation for Multi-Scale Physiology Route Modeling. Frontiers Neuroinformatics 15 (2021)
Dewan M. Sarwar, Reza Kalbasi, John H. Gennari, Brian E. Carlson, Maxwell Lewis Neal, Bernard de Bono, Koray Atalag, Peter J. Hunter, David P. Nickerson
Model annotation and discovery with the Physiome Model Repository. BMC Bioinform. 20 (1) (2019)
Honghan Wu, Anika Oellrich, Christine Girges, Bernard de Bono, Tim J. P. Hubbard, Richard J. B. Dobson
Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease. Database J. Biol. Databases Curation 2017 (2017)
Bernard de Bono, Pierre Grenon, Michiel Helvensteijn, Joost N. Kok, Natallia Kokash
ApiNATOMY: Towards Multiscale Views of Human Anatomy. IDA (2014)
Georgios S. Stamatakos, Dimitra D. Dionysiou, Fay Misichroni, Norbert M. Graf, Stefaan W. Van Gool, Rainer Bohle, Feng Dong, Marco Viceconti, Kostas Marias, Vangelis Sakkalis, Nikolaus Forgó, Ravi Radhakrishnan, Helen M. Byrne, Caterina Guiot, Philippe Büchler, Elias Neri, Anca I. D. Bucur, Bernard de Bono, Debora Testi, Manolis Tsiknakis
Computational horizons in cancer (CHIC): Developing meta- and hyper-multiscale models and repositories for in Silico Oncology - A brief technical outline of the project. IARWISOI (2014)
Natallia Kokash, Bernard de Bono, Joost N. Kok
Template-based Treemaps to Preserve Spatial Constraints. IVAPP (2014)
Michaela Gündel, Erfan Younesi, Ashutosh Malhotra, Jiali Wang, Hui Li, Bijun Zhang, Bernard de Bono, Heinz-Theodor Mevissen, Martin Hofmann-Apitius
HuPSON: the human physiology simulation ontology. J. Biomed. Semant. 4 (2013)
Bernard de Bono, Pierre Grenon, Richard A. Baldock, Peter Hunter
Functional tissue units and their primary tissue motifs in multi-scale physiology. J. Biomed. Semant. 4 (2013)
Pierre Grenon, Bernard de Bono
Eliciting candidate anatomical routes for protein interactions: a scenario from endocrine physiology. BMC Bioinform. 14 (2013)
Sarala M. Wimalaratne, Pierre Grenon, Robert Hoehndorf, Georgios V. Gkoutos, Bernard de Bono
An infrastructure for ontology-based information systems in biomedicine: RICORDO case study. Bioinform. 28 (3) (2012)
Bernard de Bono, S. J. Sammut, Pierre Grenon
Achieving Semantic Interoperability between Physiology Models and Clinical Data. e-Science Workshops (2011)
Pierre Grenon, Bernard de Bono
Logic-Based Representation of Connectivity Routes in the Immune System. ICARIS (2011)
Pierre Grenon, Sarala M. Wimalaratne, Bernard de Bono
Ontology-Strength Industry Standards: The Case of the Clinical Trial Domain. FOMI (2011)
Robert Hoehndorf, Michel Dumontier, John H. Gennari, Sarala M. Wimalaratne, Bernard de Bono, Daniel L. Cook, Georgios V. Gkoutos
Integrating systems biology models and biomedical ontologies. BMC Syst. Biol. 5 (2011)
Anna Maria Masci, Jeffrey Roach, Bernard de Bono, Pierre Grenon, Lindsay G. Cowell
Bridging Multiple Ontologies: Representation of the Liver Immune Response. ICBO (2011)
Lisa Matthews, Gopal Gopinath, Marc Gillespie, Michael Caudy, David Croft, Bernard de Bono, Phani V. Garapati, Jill Hemish, Henning Hermjakob, Bijay Jassal, Alexander Kanapin, Suzanna Lewis, Shahana Mahajan, Bruce May, Esther Schmidt, Imre Vastrik, Guanming Wu, Ewan Birney, Lincoln Stein, Peter D'Eustachio
Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res. 37 (Database-Issue) (2009)
Bernard de Bono, Imre Vastrik, Peter D'Eustachio, Esther Schmidt, Gopal Gopinath, David Croft, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein
Reactome: An integrated expert model of human molecular processes and access toolkit. J. Integr. Bioinform. 4 (3) (2007)
Esther Schmidt, Ewan Birney, David Croft, Bernard de Bono, Peter D'Eustachio, Marc Gillespie, Gopal Gopinath, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Lincoln Stein, Imre Vastrik, Guanming Wu
Reactome - A Knowledgebase of Biological Pathways. OTM Workshops (1) (2006)
G. Joshi-Tope, Marc Gillespie, Imre Vastrik, Peter D'Eustachio, Esther Schmidt, Bernard de Bono, Bijay Jassal, G. R. Gopinath, G. R. Wu, Lisa Matthews, Suzanna Lewis, Ewan Birney, Lincoln Stein
Reactome: a knowledgebase of biological pathways. Nucleic Acids Res. 33 (Database-Issue) (2005)