Vincent Lacroix

Publication Activity (10 Years)

Years Active: 2005-2018
Publications (10 Years): 2

Top Venues

CoRR

WABI

Algorithms Mol. Biol.

Bioinform.

Claude Bernard University Lyon 1, France (PHD)

Education History

Claude Bernard University Lyon 1, France

PHD

Publications

Frédéric Badeau, Vincent Lacroix, Vincent Monfort, Laurent Voisin, Christophe Métayer
Modelling Dynamic Data Structures with the B Method. ABZ (2018)
Leandro Lima, Blerina Sinaimeri, Gustavo Sacomoto, Hélène Lopez-Maestre, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix
Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads. Algorithms Mol. Biol. 12 (1) (2017)
Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot
A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs. Algorithms Mol. Biol. 10 (2015)
Gustavo Sacomoto, Blerina Sinaimeri, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix
Navigating in a Sea of Repeats in RNA-seq without Drowning. WABI (2014)
Paulo Vieira Milreu, Cecilia Coimbra Klein, Ludovic Cottret, Vicente Acuña, Etienne Birmelé, Michele Borassi, Christophe Junot, Alberto Marchetti-Spaccamela, Andrea Marino, Leen Stougie, Fabien Jourdan, Pierluigi Crescenzi, Vincent Lacroix, Marie-France Sagot
Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure. Bioinform. 30 (1) (2014)
Gustavo Sacomoto, Blerina Sinaimeri, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix
Navigating in a sea of repeats in RNA-seq without drowning. CoRR (2014)
Milana Frenkel-Morgenstern, Alessandro Gorohovski, Vincent Lacroix, Mark F. Rogers, Kristina Ibáñez, Cesar Boullosa, Eduardo Andrés León, Asa Ben-Hur, Alfonso Valencia
ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data. Nucleic Acids Res. 41 (Database-Issue) (2013)
Michele Borassi, Pierluigi Crescenzi, Vincent Lacroix, Andrea Marino, Marie-France Sagot, Paulo Vieira Milreu
Telling Stories Fast. SEA (2013)
Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot
A Polynomial Delay Algorithm for the Enumeration of Bubbles with Length Constraints in Directed Graphs and Its Application to the Detection of Alternative Splicing in RNA-seq Data. WABI (2013)
Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot
A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data. CoRR (2013)
Vicente Acuña, Etienne Birmelé, Ludovic Cottret, Pierluigi Crescenzi, Fabien Jourdan, Vincent Lacroix, Alberto Marchetti-Spaccamela, Andrea Marino, Paulo Vieira Milreu, Marie-France Sagot, Leen Stougie
Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets. Theor. Comput. Sci. 457 (2012)
Etienne Birmelé, Pierluigi Crescenzi, Rui A. Ferreira, Roberto Grossi, Vincent Lacroix, Andrea Marino, Nadia Pisanti, Gustavo Akio Tominaga Sacomoto, Marie-France Sagot
Efficient Bubble Enumeration in Directed Graphs. SPIRE (2012)
Gustavo Akio Tominaga Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix
KISSPLICE: de-novo calling alternative splicing events from RNA-seq data. BMC Bioinform. 13 (S-6) (2012)
Alexandre S. Freire, Vicente Acuña, Pilu Crescenzi, Carlos Eduardo Ferreira, Vincent Lacroix, Paulo Vieira Milreu, Eduardo Moreno, Marie-France Sagot
Minimum Ratio Cover of Matrix Columns by Extreme Rays of Its Induced Cone. ISCO (2012)
Paulo Vieira Milreu, Vicente Acuña, Etienne Birmelé, Pierluigi Crescenzi, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie, Vincent Lacroix
Enumerating Chemical Organisations in Consistent Metabolic Networks: Complexity and Algorithms. WABI (2010)
Pierre Peterlongo, Nicolas Schnel, Nadia Pisanti, Marie-France Sagot, Vincent Lacroix
Identifying SNPs without a Reference Genome by Comparing Raw Reads. SPIRE (2010)
Vicente Acuña, Flavio Chierichetti, Vincent Lacroix, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie
Modes and cuts in metabolic networks: Complexity and algorithms. Biosyst. 95 (1) (2009)
Sophie Schbath, Vincent Lacroix, Marie-France Sagot
Assessing the Exceptionality of Coloured Motifs in Networks. EURASIP J. Bioinform. Syst. Biol. 2009 (2009)
Vincent Lacroix, Ludovic Cottret, Patricia Thébault, Marie-France Sagot
An Introduction to Metabolic Networks and Their Structural Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (4) (2008)
Vincent Lacroix, Michael Sammeth, Roderic Guigó, Anne Bergeron
Exact Transcriptome Reconstruction from Short Sequence Reads. WABI (2008)
Romain Bourqui, Ludovic Cottret, Vincent Lacroix, David Auber, Patrick Mary, Marie-France Sagot, Fabien Jourdan
Metabolic network visualization eliminating node redundance and preserving metabolic pathways. BMC Syst. Biol. 1 (2007)
Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot
Motif Search in Graphs: Application to Metabolic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 3 (4) (2006)
Romain Bourqui, David Auber, Vincent Lacroix, Fabien Jourdan
Metabolic network visualization using constraint planar graph drawing algorithm. IV (2006)
Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot
Reaction Motifs in Metabolic Networks. WABI (2005)

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Publication Activity (10 Years)

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Vincent Lacroix