Vicente Acuña

Publication Activity (10 Years)

Years Active: 2006-2021
Publications (10 Years): 6

Top Venues

Bioinform.

VMCAI

BMC Bioinform.

Claude Bernard University Lyon 1, France (PHD)

Education History

Claude Bernard University Lyon 1, France

PHD

Publications

Vicente Acuña, Leandro Ishi Soares de Lima, Giuseppe F. Italiano, Luca Pepè Sciarria, Marie-France Sagot, Blerina Sinaimeri
A family of tree-based generators for bubbles in directed graphs. J. Graph Algorithms Appl. 25 (1) (2021)
Vicente Acuña, Roberto Grossi, Giuseppe Francesco Italiano, Leandro Lima, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot, Blerina Sinaimeri
On Bubble Generators in Directed Graphs. Algorithmica 82 (4) (2020)
Vicente Acuña, Leandro Lima, Giuseppe F. Italiano, Luca Pepè Sciarria, Marie-France Sagot, Blerina Sinaimeri
A Family of Tree-Based Generators for Bubbles in Directed Graphs. IWOCA (2020)
Vicente Acuña, Roberto Grossi, Giuseppe F. Italiano, Leandro Lima, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot, Blerina Sinaimeri
On Bubble Generators in Directed Graphs. WG (2017)
Vicente Acuña, Andrés Aravena, Carito Guziolowski, Damien Eveillard, Anne Siegel, Alejandro Maass
Deciphering transcriptional regulations coordinating the response to environmental changes. BMC Bioinform. 17 (2016)
Ricardo Andrade, Martin Wannagat, Cecilia Coimbra Klein, Vicente Acuña, Alberto Marchetti-Spaccamela, Paulo Vieira Milreu, Leen Stougie, Marie-France Sagot
Enumeration of minimal stoichiometric precursor sets in metabolic networks. Algorithms Mol. Biol. 11 (2016)
Vicente Acuña, Andrés Aravena, Alejandro Maass, Anne Siegel
Modeling Parsimonious Putative Regulatory Networks: Complexity and Heuristic Approach. VMCAI (2014)
Vicente Acuña, Carlos Eduardo Ferreira, Alexandre S. Freire, Eduardo Moreno
Solving the maximum edge biclique packing problem on unbalanced bipartite graphs. Discret. Appl. Math. 164 (2014)
Paulo Vieira Milreu, Cecilia Coimbra Klein, Ludovic Cottret, Vicente Acuña, Etienne Birmelé, Michele Borassi, Christophe Junot, Alberto Marchetti-Spaccamela, Andrea Marino, Leen Stougie, Fabien Jourdan, Pierluigi Crescenzi, Vincent Lacroix, Marie-France Sagot
Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure. Bioinform. 30 (1) (2014)
Vicente Acuña, Etienne Birmelé, Ludovic Cottret, Pierluigi Crescenzi, Fabien Jourdan, Vincent Lacroix, Alberto Marchetti-Spaccamela, Andrea Marino, Paulo Vieira Milreu, Marie-France Sagot, Leen Stougie
Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets. Theor. Comput. Sci. 457 (2012)
Vicente Acuña, Paulo Vieira Milreu, Ludovic Cottret, Alberto Marchetti-Spaccamela, Leen Stougie, Marie-France Sagot
Algorithms and complexity of enumerating minimal precursor sets in genome-wide metabolic networks. Bioinform. 28 (19) (2012)
Alexandre S. Freire, Vicente Acuña, Pilu Crescenzi, Carlos Eduardo Ferreira, Vincent Lacroix, Paulo Vieira Milreu, Eduardo Moreno, Marie-France Sagot
Minimum Ratio Cover of Matrix Columns by Extreme Rays of Its Induced Cone. ISCO (2012)
Paulo Vieira Milreu, Vicente Acuña, Etienne Birmelé, Pierluigi Crescenzi, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie, Vincent Lacroix
Enumerating Chemical Organisations in Consistent Metabolic Networks: Complexity and Algorithms. WABI (2010)
Vicente Acuña, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie
A note on the complexity of finding and enumerating elementary modes. Biosyst. 99 (3) (2010)
Vicente Acuña, Carlos Eduardo Ferreira, Alexandre S. Freire, Eduardo Moreno
The biclique k-clustering problem in bipartite graphs and its application in bioinformatics. Electron. Notes Discret. Math. 36 (2010)
Ludovic Cottret, Paulo Vieira Milreu, Vicente Acuña, Alberto Marchetti-Spaccamela, Leen Stougie, Hubert Charles, Marie-France Sagot
. PLoS Comput. Biol. 6 (9) (2010)
Vicente Acuña, Flavio Chierichetti, Vincent Lacroix, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie
Modes and cuts in metabolic networks: Complexity and algorithms. Biosyst. 95 (1) (2009)
Ludovic Cottret, Paulo Vieira Milreu, Vicente Acuña, Alberto Marchetti-Spaccamela, Fábio Viduani Martinez, Marie-France Sagot, Leen Stougie
Enumerating Precursor Sets of Target Metabolites in a Metabolic Network. WABI (2008)
Vicente Acuña, Gilles Didier, Alejandro Maass
Coding with variable block maps. Theor. Comput. Sci. 369 (1-3) (2006)

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Publication Activity (10 Years)

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Vicente Acuña