Tomasz Adamusiak

Publication Activity (10 Years)

Years Active: 2009-2022
Publications (10 Years): 2

Top Topics

Semantic Interoperability

Owl Dl Ontologies

Logical Reasoning

Health Information

Top Venues

npj Digit. Medicine

Publications

Dimitrios J. Psaltos, Fahimeh Mamashli, Tomasz Adamusiak, Charmaine Demanuele, Mar Santamaria, Matthew Czech
Wearable-Based Stair Climb Power Estimation and Activity Classification. Sensors 22 (17) (2022)
Matthew Czech, Dimitrios J. Psaltos, Hao Zhang, Tomasz Adamusiak, Monica Calicchio, Amey Kelekar, Andrew Messere, Koene R. A. Van Dijk, Vesper Ramos, Charmaine Demanuele, Xuemei Cai, Mar Santamaria, Shyamal Patel, Fikret Isik Karahanoglu
Age and environment-related differences in gait in healthy adults using wearables. npj Digit. Medicine 3 (2020)
Tomasz Adamusiak, Mary Shimoyama
Inadvertent Disclosure of Protected Health Information (PHI) in Randomly Shifted Date Elements for De-identification. AMIA (2013)
Tomasz Adamusiak, Naoki Shimoyama, Marek Tutaj, Mary Shimoyama
Next generation ontology browser. ICBO (2013)
Misha Kapushesky, Tomasz Adamusiak, Tony Burdett, Aedín C. Culhane, Anna Farne, Alexey Filippov, Ele Holloway, Andrey Klebanov, Nataliya Kryvych, Natalja Kurbatova, Pavel Kurnosov, James Malone, Olga Melnichuk, Robert Petryszak, Nikolay Pultsin, Gabriella Rustici, Andrew Tikhonov, Ravensara S. Travillian, Eleanor Williams, Andrey Zorin, Helen E. Parkinson, Alvis Brazma
Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments. Nucleic Acids Res. 40 (Database-Issue) (2012)
Tomasz Adamusiak, Naoki Shimoyama, Alexandra Fuiks, Mary Shimoyama
Ontologies Put More Meaning into Meaningful Use. SWAT4LS (2012)
Tomasz Adamusiak, Olivier Bodenreider
Quality Assurance in LOINC using Description Logic. AMIA (2012)
Helena F. Deus, Eric Prud'hommeaux, Michael Miller, Jun Zhao, James Malone, Tomasz Adamusiak, Jamie P. McCusker, Sudeshna Das, Philippe Rocca-Serra, Ronan Fox, M. Scott Marshall
Translating standards into practice - One Semantic Web API for Gene Expression. J. Biomed. Informatics 45 (4) (2012)
Myles Byrne, Ivo F. A. C. Fokkema, Owen Lancaster, Tomasz Adamusiak, Anni Ahonen-Bishopp, David Atlan, Christophe Béroud, Michael Cornell, Raymond Dalgleish, Andrew Devereau, George P. Patrinos, Morris A. Swertz, Peter E. M. Taschner, Gudmundur A. Thorisson, Mauno Vihinen, Anthony J. Brookes, Juha Muilu
VarioML framework for comprehensive variation data representation and exchange. BMC Bioinform. 13 (2012)
Helena F. Deus, Jun Zhao, Jamie P. McCusker, Ronan Fox, Eric Prud'hommeaux, James Malone, Sudeshna Das, Michael Miller, Tomasz Adamusiak, Philippe Rocca-Serra, M. Scott Marshall
Translating standards into practice: one semantic web API for gene expression. SWAT4LS (2011)
Natalja Kurbatova, Tomasz Adamusiak, Pavel Kurnosov, Morris A. Swertz, Misha Kapushesky
ontoCAT: an R package for ontology traversal and search. Bioinform. 27 (17) (2011)
Tomasz Adamusiak, Tony Burdett, Natalja Kurbatova, K. Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Misha Kapushesky, Helen E. Parkinson, Morris A. Swertz
OntoCAT - simple ontology search and integration in Java, R and REST/JavaScript. BMC Bioinform. 12 (2011)
Ravensara S. Travillian, Tomasz Adamusiak, Tony Burdett, Michael Gruenberger, John M. Hancock, Ann-Marie Mallon, James Malone, Paul N. Schofield, Helen E. Parkinson
Anatomy ontologies and potential users: bridging the gap. J. Biomed. Semant. 2 (S-4) (2011)
Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma
ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments. Nucleic Acids Res. 39 (Database-Issue) (2011)
Chao Pang, Tomasz Adamusiak, Helen E. Parkinson, James Malone
Rapid Development of an Ontology of Coriell Cell Lines. ICBO (2011)
Morris A. Swertz, Martijn Dijkstra, Tomasz Adamusiak, K. Joeri van der Velde, Alexandros Kanterakis, Erik T. Roos, Joris Lops, Gudmundur A. Thorisson, Danny Arends, George Byelas, Juha Muilu, Anthony J. Brookes, Engbert O. de Brock, Ritsert C. Jansen, Helen E. Parkinson
The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. BMC Bioinform. 11 (S-12) (2010)
James Malone, Ele Holloway, Tomasz Adamusiak, Misha Kapushesky, Jie Zheng, Nikolay Kolesnikov, Anna Zhukova, Alvis Brazma, Helen E. Parkinson
Modeling sample variables with an Experimental Factor Ontology. Bioinform. 26 (8) (2010)
James Malone, Tomasz Adamusiak, Ele Holloway, Misha Kapushesky, Helen E. Parkinson
Developing an Ontology from the Application Up. OWLED (2009)
Helen E. Parkinson, Misha Kapushesky, Nikolay Kolesnikov, Gabriella Rustici, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Bérubé, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Ibne Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Zheng Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma
ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res. 37 (Database-Issue) (2009)