Marco Brandizi

Publication Activity (10 Years)

Years Active: 2007-2018
Publications (10 Years): 4

Top Topics

Subgraph Isomorphism

Top Venues

Nucleic Acids Res.

BMC Medical Informatics Decis. Mak.

J. Integr. Bioinform.

Publications

Marco Brandizi, Ajit Singh, Christopher J. Rawlings, Keywan Hassani-Pak
Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach. J. Integr. Bioinform. 15 (3) (2018)
Marco Brandizi, Ajit Singh, Keywan Hassani-Pak
Getting the best of Linked Data and Property Graphs: rdf2neo and the KnetMiner use case. SWAT4LS (2018)
Marco Brandizi, Olga Melnichuk, Raffael Bild, Florian Kohlmayer, Benedicto Rodriguez-Castro, Helmut Spengler, Klaus A. Kuhn, Wolfgang Kuchinke, Christian Ohmann, Timo Mustonen, Mikael Linden, Tommi H. Nyrönen, Ilkka Lappalainen, Alvis Brazma, Ugis Sarkans
Orchestrating differential data access for translational research: a pilot implementation. BMC Medical Informatics Decis. Mak. 17 (1) (2017)
Nikolay Kolesnikov, Emma Hastings, Maria Keays, Olga Melnichuk, Y. Amy Tang, Eleanor Williams, Miroslaw Dylag, Natalja Kurbatova, Marco Brandizi, Tony Burdett, Karyn Megy, Ekaterina Pilicheva, Gabriella Rustici, Andrew Tikhonov, Helen E. Parkinson, Robert Petryszak, Ugis Sarkans, Alvis Brazma
ArrayExpress update - simplifying data submissions. Nucleic Acids Res. 43 (Database-Issue) (2015)
Simon Jupp, James Malone, Jerven T. Bolleman, Marco Brandizi, Mark Davies, Leyla J. García, Anna Gaulton, Sebastien Gehant, Camille Laibe, Nicole Redaschi, Sarala M. Wimalaratne, Maria Jesus Martin, Nicolas Le Novère, Helen E. Parkinson, Ewan Birney, Andrew M. Jenkinson
The EBI RDF platform: linked open data for the life sciences. Bioinform. 30 (9) (2014)
Adam Faulconbridge, Tony Burdett, Marco Brandizi, Mikhail Gostev, Rui Pedro Pereira, Drashtti Vasant, Ugis Sarkans, Alvis Brazma, Helen E. Parkinson
Updates to BioSamples database at European Bioinformatics Institute. Nucleic Acids Res. 42 (Database-Issue) (2014)
Gabriella Rustici, Nikolay Kolesnikov, Marco Brandizi, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Jon C. Ison, Maria Keays, Natalja Kurbatova, James Malone, Roby Mani, Annalisa Mupo, Rui Pedro Pereira, Ekaterina Pilicheva, Johan Rung, Anjan Sharma, Y. Amy Tang, Tobias Ternent, Andrew Tikhonov, Danielle Welter, Eleanor Williams, Alvis Brazma, Helen E. Parkinson, Ugis Sarkans
ArrayExpress update - trends in database growth and links to data analysis tools. Nucleic Acids Res. 41 (Database-Issue) (2013)
Marco Brandizi, Natalja Kurbatova, Ugis Sarkans, Philippe Rocca-Serra
graph2tab, a library to convert experimental workflow graphs into tabular formats. Bioinform. 28 (12) (2012)
Mikhail Gostev, Adam Faulconbridge, Marco Brandizi, Julio Fernandez-Banet, Ugis Sarkans, Alvis Brazma, Helen E. Parkinson
The BioSample Database (BioSD) at the European Bioinformatics Institute. Nucleic Acids Res. 40 (Database-Issue) (2012)
Andrea Splendiani, Michaela Gündel, Jonathan M. Austyn, Duccio Cavalieri, Ciro Scognamiglio, Marco Brandizi
Knowledge sharing and collaboration in translational research, and the DC-THERA Directory. Briefings Bioinform. 12 (6) (2011)
Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma
ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments. Nucleic Acids Res. 39 (Database-Issue) (2011)
Philippe Rocca-Serra, Marco Brandizi, Eamonn Maguire, Nataliya Sklyar, Chris F. Taylor, Kimberly Begley, Dawn Field, Stephen C. Harris, Winston Hide, Oliver Hofmann, Steffen Neumann, Peter Sterk, Weida Tong, Susanna-Assunta Sansone
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinform. 26 (18) (2010)
Helen E. Parkinson, Misha Kapushesky, Nikolay Kolesnikov, Gabriella Rustici, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Bérubé, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Ibne Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Zheng Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma
ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res. 37 (Database-Issue) (2009)
Marco Brandizi, Michaela Gündel, Ciro Scognamiglio, Andrea Splendiani
DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community. SWAT4LS (2009)
Michaela Gündel, Ciro Scognamiglio, Marco Brandizi, Andrea Splendiani
The DC-THERA Directory: A Knowledge Management System to Support Collaboration on Dendritic Cell and Immunology Research. SWAT4LS (2008)
Andrea Splendiani, Marco Brandizi, Gael Even, Ottavio Beretta, Norman Pavelka, Mattia Pelizzola, Manuel Mayhaus, Maria Foti, Giancarlo Mauri, Paola Ricciardi-Castagnoli
The Genopolis Microarray Database. BMC Bioinform. 8 (S-1) (2007)