Sabino Liuni

Publication Activity (10 Years)

Years Active: 1990-2020
Publications (10 Years): 5

Top Topics

Differential Expression

Biological Sequence Analysis

Top Venues

Nucleic Acids Res.

Briefings Bioinform.

Publications

Simone Puccio, Giorgio Grillo, Arianna Consiglio, Maria Felicia Soluri, Daniele Sblattero, Diego Cotella, Claudio Santoro, Sabino Liuni, Gianluca De Bellis, Enrico Lugli, Clelia Peano, Flavio Licciulli
InteractomeSeq: a web server for the identification and profiling of domains and epitopes from phage display and next generation sequencing data. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Vincenzo Bonnici, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia, Nicola Bombieri, Flavio Licciulli, Rosalba Giugno
Arena-Idb: a platform to build human non-coding RNA interaction networks. BMC Bioinform. (10) (2018)
Monica Santamaria, Bruno Fosso, Flavio Licciulli, Bachir Balech, Ilaria Larini, Giorgio Grillo, Giorgio De Caro, Sabino Liuni, Graziano Pesole
ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences. Nucleic Acids Res. 46 (Database-Issue) (2018)
Simone Puccio, Giorgio Grillo, Flavio Licciulli, Marco Severgnini, Sabino Liuni, Silvio Bicciato, Gianluca De Bellis, Francesco Ferrari, Clelia Peano
WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Arianna Consiglio, Corrado Mencar, Giorgio Grillo, Flaviana Marzano, Mariano Francesco Caratozzolo, Sabino Liuni
A fuzzy method for RNA-Seq differential expression analysis in presence of multireads. BMC Bioinform. 17 (S-12) (2016)
Arianna Consiglio, Corrado Mencar, Giorgio Grillo, Sabino Liuni
Managing NGS Differential Expression Uncertainty with Fuzzy Sets. CIBB (2015)
Monica Santamaria, Bruno Fosso, Arianna Consiglio, Giorgio De Caro, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente, Graziano Pesole
Reference databases for taxonomic assignment in metagenomics. Briefings Bioinform. 13 (6) (2012)
Arianna Consiglio, Massimo Carella, Giorgio De Caro, Gianfranco Delle Foglie, Candida Giovannelli, Giorgio Grillo, Massimo Ianigro, Flavio Licciulli, Orazio Palumbo, Ada Piepoli, Elena Ranieri, Sabino Liuni
BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments. BMC Bioinform. 13 (S-4) (2012)
David Stephen Horner, Giulio Pavesi, Tiziana Castrignanò, Paolo D'Onorio De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing. Briefings Bioinform. 11 (2) (2010)
Giorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 38 (Database-Issue) (2010)
Paolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo, Sabino Liuni, Flavio Mignone, Graziano Pesole, Nicola Ancona
HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers. CCGRID (2008)
Rosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona
Selection of relevant genes in cancer diagnosis based on their prediction accuracy. Artif. Intell. Medicine 40 (1) (2007)
Paolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna, Tiziana Castrignanò, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Matteo Re, Flavio Mignone, Graziano Pesole
A high performance grid-web service framework for the identification of 'conserved sequence tags'. Future Gener. Comput. Syst. 23 (3) (2007)
Elisabetta Sbisà, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Antonio Turi, Sabino Liuni, Graziano Pesole, Anna De Grassi, Mariano Francesco Caratozzolo, Anna Maria D'Erchia, Beatriz Navarro, Apollonia Tullo, Cecilia Saccone, Andreas Gisel
prediction and microarray data. BMC Bioinform. 8 (S-1) (2007)
Rosalia Maglietta, Ada Piepoli, Domenico Catalano, Piepoli Licciulli, Massimo Carella, Sabino Liuni, Graziano Pesole, Francesco Perri, Nicola Ancona
Statistical assessment of functional categories of genes deregulated in pathological conditions by using microarray data. Bioinform. 23 (16) (2007)
Tiziana Castrignanò, Paolo D'Onorio De Meo, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Ivano Giuseppe Talamo, Graziano Pesole
GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags. Bioinform. 22 (4) (2006)
Nicola Ancona, Rosalia Maglietta, Ada Piepoli, Annarita D'Addabbo, R. Cotugno, M. Savino, Sabino Liuni, Massimo Carella, Graziano Pesole, Francesco Perri
On the statistical assessment of classifiers using DNA microarray data. BMC Bioinform. 7 (2006)
Rosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona
Classification error as a measure of gene relevance in cancer diagnosis. IJCNN (2006)
Nicola Ancona, Rosalia Maglietta, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole
Regularized Least Squares Cancer Classifiers from DNA microarray data. BMC Bioinform. 6 (S-4) (2005)
Nicola Ancona, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole, Rosalia Maglietta
SVM and RLS Models for Cancer Classification. Computational Intelligence (2005)
Flavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul J. Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole
UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 33 (Database-Issue) (2005)
Tiziana Castrignanò, Alessandro Canali, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Graziano Pesole
CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Andreas Gisel, Maria Panetta, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Cecilia Saccone, Graziano Pesole
DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions. Bioinform. 20 (18) (2004)
Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole
PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences. Nucleic Acids Res. 31 (13) (2003)
Guglielmo Rainaldi, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci
PLMItRNA, a database on the heterogeneous genetic origin of mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res. 31 (1) (2003)
Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Flavio Mignone, Carmela Gissi, Cecilia Saccone
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002. Nucleic Acids Res. 30 (1) (2002)
F. De Leo, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci
PLANT-PIs: a database for plant protease inhibitors and their genes. Nucleic Acids Res. 30 (1) (2002)
Marcella Attimonelli, Domenico Catalano, Carmela Gissi, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Monica Santamaria, Graziano Pesole, Cecilia Saccone
MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002. Nucleic Acids Res. 30 (1) (2002)
Fabrizio Damiano, Raffaele Gallerani, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci
PLMItRNA, a database for mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res. 29 (1) (2001)
Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 28 (1) (2000)
Graziano Pesole, Giorgio Grillo, Alessandra Larizza, Sabino Liuni
The Untranslated Regions of Eukaryotic MRNAs: Structure, Function, Evolution and Bioinformatic Tools for Their Analysis. Briefings Bioinform. 1 (3) (2000)
Cecilia Lanave, Sabino Liuni, Flavio Licciulli, Marcella Attimonelli
Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences. Nucleic Acids Res. 28 (1) (2000)
Graziano Pesole, Carmela Gissi, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone
MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins. Nucleic Acids Res. 28 (1) (2000)
Graziano Pesole, Sabino Liuni, Mark D'Souza
PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance. Bioinform. 16 (5) (2000)
Vito Volpetti, Raffaele Gallerani, Caterina De Benedetto, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci
PLMItRNA, a database for tRNAs and tRNA genes in plant mitochondria: enlargement and updating. Nucleic Acids Res. 28 (1) (2000)
Cecilia Lanave, Marcella Attimonelli, Mariateresa De Robertis, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Cecilia Saccone
Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences. Nucleic Acids Res. 27 (1) (1999)
Luigi R. Ceci, Mariateresa Volpicella, Sabino Liuni, Vito Volpetti, Flavio Licciulli, Raffaele Gallerani
PLMItRNA, a database for higher plant mitochondrial tRNAs and tRNA genes. Nucleic Acids Res. 27 (1) (1999)
Graziano Pesole, Sabino Liuni, Giorgio Grillo, Matilde Ippedico, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone
UTRdb: a specialized database of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 27 (1) (1999)
Graziano Pesole, Sabino Liuni, Giorgio Grillo, Cecilia Saccone
UTRdb: a specialized database of 5'- and 3'-untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 26 (1) (1998)
Giorgio Grillo, Marcella Attimonelli, Sabino Liuni, Graziano Pesole
CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases. Comput. Appl. Biosci. 12 (1) (1996)
Graziano Pesole, Giorgio Grillo, Sabino Liuni
Databases of MRNA Untranslated Regions for Metazoa. Comput. Chem. 20 (1) (1996)
Sabino Liuni, N. Prunella, Graziano Pesole, Tiziana D'Orazio, Ettore Stella, Arcangelo Distante
SIMD parallelization of the WORDUP algorithm for detecting statistically significant patterns in DNA sequences. Comput. Appl. Biosci. 9 (6) (1993)
N. Prunella, Sabino Liuni, Marcella Attimonelli, Graziano Pesole
FASTPAT: a fast and efficient algorithm for string searching in DNA sequences. Comput. Appl. Biosci. 9 (5) (1993)
Elisabetta Pizzi, Marcella Attimonelli, Sabino Liuni, Clara Frontali, Cecilia Saccone
A simple method for global sequence comparison. Nucleic Acids Res. 20 (1) (1992)
Elisabetta Pizzi, Sabino Liuni, Clara Frontali
Detection of latent sequence periodicities. Nucleic Acids Res. 18 (13) (1990)