Domenica D'Elia

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 11

Top Topics

Ensemble Learning

Partitional Clustering

Gene Regulatory Networks

Top Venues

PLoS Comput. Biol.

Publications

Daniele Rosa, Antonio Pellicani, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci
Exploiting microRNA Expression Data for the Diagnosis of Disease Conditions and the Discovery of Novel Biomarkers. ISMIS (2024)
Susanne Hollmann, Babette Regierer, Jaele Bechis, Lesley Tobin, Domenica D'Elia
Ten simple rules on how to develop a stakeholder engagement plan. PLoS Comput. Biol. 18 (10) (2022)
Susanne Hollmann, Marcus Frohme, Christoph Endrullat, Andreas Kremer, Domenica D'Elia, Babette Regierer, Alina S. Nechyporenko
Ten simple rules on how to write a standard operating procedure. PLoS Comput. Biol. 16 (9) (2020)
Susanne Hollmann, Andreas Kremer, Spela Baebler, Christophe Trefois, Kristina Gruden, Witold R. Rudnicki, Weida Tong, Aleksandra Gruca, Erik Bongcam-Rudloff, Chris T. A. Evelo, Alina S. Nechyporenko, Marcus Frohme, David Safránek, Babette Regierer, Domenica D'Elia
The need for standardisation in life science research - an approach to excellence and trust. F1000Research 9 (2020)
Paolo Mignone, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci
Exploiting transfer learning for the reconstruction of the human gene regulatory network. Bioinform. 36 (5) (2020)
Emanuele Pio Barracchia, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci
Prediction of New Associations between ncRNAs and Diseases Exploiting Multi-Type Hierarchical Clustering. SEBD (2020)
Emanuele Pio Barracchia, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci
Prediction of new associations between ncRNAs and diseases exploiting multi-type hierarchical clustering. BMC Bioinform. 21 (1) (2020)
Vincenzo Bonnici, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia, Nicola Bombieri, Flavio Licciulli, Rosalba Giugno
Arena-Idb: a platform to build human non-coding RNA interaction networks. BMC Bioinform. (10) (2018)
Susanne Hollmann, Teresa K. Attwood, Erik Bongcam-Rudloff, Deborah Duca, Domenica D'Elia, Christoph Endrullat, Marcus Frohme, Katrin Messerschmidt, Babette Regierer
Standardization and Quality Assurance in Life-Science Research - Crucially Needed or Unnecessary and Annoying Regulation? ICT Innovations (2018)
Paolo Romano, Ralf Hofestädt, Matthias Lange, Domenica D'Elia
The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes. BMC Bioinform. 18 (S-5) (2017)
Gianvito Pio, Michelangelo Ceci, Donato Malerba, Domenica D'Elia
ComiRNet: a web-based system for the analysis of miRNA-gene regulatory networks. BMC Bioinform. 16 (S-9) (2015)
Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Donato Malerba
Learning to Combine miRNA Target Predictions: a Semi-supervised Ensemble Learning Approach. SEBD (2014)
Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Donato Malerba
Network Reconstruction for the Identification of miRNA: mRNA Interaction Networks. ECML/PKDD (3) (2014)
Gianvito Pio, Donato Malerba, Domenica D'Elia, Michelangelo Ceci
Integrating microRNA target predictions for the discovery of gene regulatory networks: a semi-supervised ensemble learning approach. BMC Bioinform. 15 (S-1) (2014)
Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Corrado Loglisci, Donato Malerba
HOCCLUS2: A Biclustering Algorithm for the Discovery of miRNA: mRNA regulatory modules. SEBD (2013)
Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Corrado Loglisci, Donato Malerba
A Novel Biclustering Algorithm for the Discovery of Meaningful Biological Correlations between microRNAs and their Target Genes. BMC Bioinform. 14 (S-7) (2013)
Gianvito Pio, Michelangelo Ceci, Corrado Loglisci, Domenica D'Elia, Donato Malerba
Hierarchical and Overlapping Co-Clustering of mRNA: miRNA Interactions. ECAI (2012)
Corrado Loglisci, Eliana Salvemini, Antonio Turi, Giorgio Grillo, Donato Malerba, Domenica D'Elia
Mining Frequent Patterns of Biological Spaced Motifs. SEBD (2009)
Antonio Turi, Corrado Loglisci, Eliana Salvemini, Giorgio Grillo, Donato Malerba, Domenica D'Elia
Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining. BMC Bioinform. 10 (S-6) (2009)
Domenica D'Elia, Andreas Gisel, Nils-Einar Eriksson, Sophia Kossida, Kimmo Mattila, Lubos Klucar, Erik Bongcam-Rudloff
anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community. BMC Bioinform. 10 (S-6) (2009)
Domenico Catalano, Flavio Licciulli, Antonio Turi, Giorgio Grillo, Cecilia Saccone, Domenica D'Elia
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa. BMC Bioinform. 7 (2006)
Domenico Catalano, Flavio Licciulli, Domenica D'Elia, Marcella Attimonelli
Update of KEYnet: a gene and protein names database for biosequences functional organisation. Nucleic Acids Res. 28 (1) (2000)
Marcella Attimonelli, N. Altamura, R. Benne, A. Brennicke, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, P. Golik, V. Knoop, Cecilia Lanave, Jaga Lazowska, Flavio Licciulli, B. S. Malladi, F. Memeo, M. Monnerot, R. Pasimeni, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Cecilia Saccone
MitBASE : a comprehensive and integrated mitochondrial DNA database. The present status. Nucleic Acids Res. 28 (1) (2000)
Flavio Licciulli, Domenico Catalano, Domenica D'Elia, V. Lorusso, Marcella Attimonelli
KEYnet: a keywords database for biosequences functional organization. Nucleic Acids Res. 27 (1) (1999)
Marcella Attimonelli, N. Altamura, R. Benne, C. Boyen, A. Brennicke, A. Carone, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, P. Golik, J. M. Grienenberger, V. Knoop, Cecilia Lanave, Jaga Lazowska, A. Lemagnen, B. S. Malladi, F. Memeo, M. Monnerot, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Piotr P. Slonimski, K. Stevens, Cecilia Saccone
MitBASE: a comprehensive and integrated mitochondrial DNA database. Nucleic Acids Res. 27 (1) (1999)
Marcella Attimonelli, J. M. Cooper, Domenica D'Elia, A. de Montalvo, Mariateresa De Robertis, Heikki Lehväslaiho, S. B. Malladi, F. Memeo, K. Stevens, A. H. V. Schapira, Cecilia Saccone
Update of the Human MitBASE database. Nucleic Acids Res. 27 (1) (1999)