Paolo Tieri

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 21

Top Topics

Disease Diagnosis

Gene Regulatory

Computational Models

Top Venues

Briefings Bioinform.

Publications

Enrico Mastrostefano, Alessandro Ravoni, Elia Onofri, Paolo Tieri, Filippo Castiglione
Harnessing computational models to uncover the role of the immune system in tuberculosis treatment. BIBM (2023)
Maria Concetta Palumbo, Albert A. de Graaf, Micaela Morettini, Paolo Tieri, Shaji Krishnan, Filippo Castiglione
A computational model of the effects of macronutrients absorption and physical exercise on hormonal regulation and metabolic homeostasis. Comput. Biol. Medicine 163 (2023)
Paola Stolfi, Andrea Mastropietro, Giuseppe Pasculli, Paolo Tieri, Davide Vergni
NIAPU: network-informed adaptive positive-unlabeled learning for disease gene identification. Bioinform. 39 (2) (2023)
Filippo Castiglione, Christine Nardini, Elia Onofri, Marco Pedicini, Paolo Tieri
Explainable Drug Repurposing Approach From Biased Random Walks. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (2) (2023)
Riccardo De Luca, Marco Carfora, Gonzalo Blanco, Andrea Mastropietro, Manuela Petti, Paolo Tieri
PROCONSUL: PRObabilistic exploration of CONnectivity Significance patterns for disease modULe discovery. BIBM (2022)
Pratuat Amatya, Paola Stolfi, Flavio Lombardi, Paolo Tieri
DruSiLa: an integrated, in-silico disease similarity-based approach for drug repurposing. BIBM (2022)
Alessia Palleschi, Manuela Petti, Paolo Tieri, Marco Angelini
Toward Disease Diagnosis Visual Support Bridging Classic and Precision Medicine. EuroVA@EuroVis (2022)
Haiying Wang, Estelle Pujos-Guillot, Blandine Comte, Joao Luis de Miranda, Vojtech Spiwok, Ivan Chorbev, Filippo Castiglione, Paolo Tieri, Steven Watterson, Roisin McAllister, Tiago De Melo Malaquias, Massimiliano Zanin, Taranjit Singh Rai, Huiru Zheng
Deep learning in systems medicine. Briefings Bioinform. 22 (2) (2021)
Paola Stolfi, Andrea Mastropietro, Giuseppe Pasculli, Paolo Tieri, Davide Vergni
Adaptive Positive-Unlabelled Learning via Markov Diffusion. CoRR (2021)
Olga Lazareva, Stefan Canzar, Kevin Yuan, Jan Baumbach, David B. Blumenthal, Paolo Tieri, Tim Kacprowski, Markus List
BiCoN: network-constrained biclustering of patients and omics data. Bioinform. 37 (16) (2021)
Paola Stolfi, Ilaria Valentini, Maria Concetta Palumbo, Paolo Tieri, Andrea Grignolio, Filippo Castiglione
Potential predictors of type-2 diabetes risk: machine learning, synthetic data and wearable health devices. BMC Bioinform. (17) (2020)
David B. Blumenthal, Lorenzo Viola, Markus List, Jan Baumbach, Paolo Tieri, Tim Kacprowski
EpiGEN: an epistasis simulation pipeline. Bioinform. 36 (19) (2020)
Alessandro Celestini, Marco Cianfriglia, Enrico Mastrostefano, Alessandro Palma, Filippo Castiglione, Paolo Tieri
Critical nodes reveal peculiar features of human essential genes and protein interactome. BIBM (2019)
Massimiliano Zanin, Ivan Chorbev, Blaz Stres, Egils Stalidzans, Julio Vera, Paolo Tieri, Filippo Castiglione, Derek Groen, Huiru Zheng, Jan Baumbach, Johannes A. Schmid, José Basilio, Peter Klimek, Natasa Debeljak, Damjana Rozman, Harald H. H. W. Schmidt
Community effort endorsing multiscale modelling, multiscale data science and multiscale computing for systems medicine. Briefings Bioinform. 20 (3) (2019)
Paola Stolfi, Ilaria Valentini, Maria Concetta Palumbo, Paolo Tieri, Andrea Grignolio, Filippo Castiglione
Potential predictors of type-2 diabetes risk: machine learning, synthetic data and wearable health devices. BIBM (2019)
Vinca Prana, Paolo Tieri, Maria Concetta Palumbo, Emiliano Mancini, Filippo Castiglione
Modeling the Effect of High Calorie Diet on the Interplay between Adipose Tissue, Inflammation, and Diabetes. Comput. Math. Methods Medicine 2019 (2019)
Maria Concetta Palumbo, Micaela Morettini, Paolo Tieri, Fasma Diele, Massimo Sacchetti, Filippo Castiglione
Personalizing physical exercise in a computational model of fuel homeostasis. PLoS Comput. Biol. 14 (4) (2018)
Leandro Martins de Freitas, Tatiani Uceli Maioli, Henrique Assis Lopes de Ribeiro, Paolo Tieri, Filippo Castiglione
A mathematical model of Chagas disease infection predicts inhibition of the immune system. BIBM (2018)
Henrique Assis Lopes de Ribeiro, Tatiani Uceli Maioli, Leandro Martins de Freitas, Paolo Tieri, Filippo Castiglione
A mathematical model of murine macrophage infected with Leishmania sp. BIBM (2018)
Filippo Castiglione, Paolo Tieri, Alessandro Palma, Abdul Salam Jarrah
Statistical ensemble of gene regulatory networks of macrophage differentiation. BMC Bioinform. 17 (S-19) (2016)
Antonio Cappuccio, Paolo Tieri, Filippo Castiglione
Multiscale modelling in immunology: a review. Briefings Bioinform. 17 (3) (2016)
Paolo Tieri, Vinca Prana, Teresa Colombo, Daniele Santoni, Filippo Castiglione
Multi-scale Simulation of T Helper Lymphocyte Differentiation. BSB (2014)
Daniel Remondini, Nicola Neretti, Claudio Franceschi, Paolo Tieri, John M. Sedivy, Luciano Milanesi, Gastone C. Castellani
Networks from Gene Expression Time Series: Characterization of Correlation Patterns. Int. J. Bifurc. Chaos 17 (7) (2007)
Daniel Remondini, Paolo Tieri, Silvana Valensin, Ettore Verondini, Claudio Franceschi, F. Bersani, Gastone C. Castellani
A General Learning Rule for Network Modeling of Neuroimmune Interactome. WIRN/NAIS (2005)
Paolo Tieri, Silvana Valensin, Vito Latora, Gastone C. Castellani, Massimo Marchiori, Daniel Remondini, Claudio Franceschi
Quantifying the relevance of different mediators in the human immune cell network. Bioinform. 21 (8) (2005)
Paolo Tieri, Silvana Valensin, Claudio Franceschi, C. Morandi, Gastone C. Castellani
Memory and Selectivity in Evolving Scale-Free Immune Networks. ICARIS (2003)