Marco Pellegrini

Publication Activity (10 Years)

Years Active: 1990-2024
Publications (10 Years): 4

Top Topics

Motif Discovery

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Marco Pellegrini
Advances in Network-Based Drug Repositioning. From Computational Logic to Computational Biology (2024)
Loredana M. Genovese, Marco M. Mosca, Marco Pellegrini, Filippo Geraci
Dot2dot: accurate whole-genome tandem repeats discovery. Bioinform. 35 (6) (2019)
Francesco Russo, Sebastiano Di Bella, Federica Vannini, Gabriele Berti, Flavia Scoyni, Helen Cook, Alberto Santos, Giovanni Nigita, Vincenzo Bonnici, Alessandro Laganà, Filippo Geraci, Alfredo Pulvirenti, Rosalba Giugno, Federico De Masi, Kirstine Belling, Lars Juhl Jensen, Søren Brunak, Marco Pellegrini, Alfredo Ferro
miRandola 2017: a curated knowledge base of non-invasive biomarkers. Nucleic Acids Res. 46 (Database-Issue) (2018)
Marco Pellegrini, Miriam Baglioni, Filippo Geraci
Protein complex prediction for large protein protein interaction networks with the Core&Peel method. BMC Bioinform. 17 (S-12) (2016)
Pinaki Bhaskar, Marina Buzzi, Filippo Geraci, Marco Pellegrini
From Literature to Knowledge: Exploiting PubMed to Answer Biomedical Questions in Natural Language. ITBAM (2015)
Elisabetta Bergamini, Romina D'Aurizio, Mauro Leoncini, Marco Pellegrini
CNVScan: detecting borderline copy number variations in NGS data via scan statistics. BCB (2015)
Jaroslav Nesetril, Marco Pellegrini
Preface. Eur. J. Comb. 48 (2015)
Mauro Leoncini, Manuela Montangero, Marco Pellegrini, Karina Panucia Tillan
CMStalker: A Combinatorial Tool for Composite Motif Discovery. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (5) (2015)
Indrajit Saha, Shib Sankar Bhowmick, Filippo Geraci, Marco Pellegrini, Debotosh Bhattacharjee, Ujjwal Maulik, Dariusz Plewczynski
Analysis of Next-Generation Sequencing Data of miRNA for the Prediction of Breast Cancer. SEMCCO (2015)
Miriam Baglioni, Stefania Pieroni, Filippo Geraci, Fabio Mariani, Sabrina Molinaro, Marco Pellegrini, Ernesto Lastres
A New Framework for Distilling Higher Quality Information from Health Data via Social Network Analysis. ICDM Workshops (2013)
Filippo Geraci, Maurizio Martinelli, Marco Pellegrini, Michela Serrecchia
A Framework to Evaluate Information Quality in Public Administration Website. Pac. Asia J. Assoc. Inf. Syst. 5 (3) (2013)
Mauro Leoncini, Manuela Montangero, Marco Pellegrini, Karina Panucia Tillan
CMF: A Combinatorial Tool to Find Composite Motifs. LION (2013)
Miriam Baglioni, Filippo Geraci, Marco Pellegrini, Ernesto Lastres
Fast Exact Computation of betweenness Centrality in Social Networks. ASONAM (2012)
Marco Pellegrini, Maria Elena Renda, Alessio Vecchio
Tandem repeats discovery service (TReaDS) applied to finding novel cis-acting factors in repeat expansion diseases. BMC Bioinform. 13 (S-4) (2012)
Marco Pellegrini, Filippo Geraci, Miriam Baglioni
Detecting dense communities in large social and information networks with the Core & Peel algorithm CoRR (2012)
Marco Pellegrini, Maria Elena Renda, Alessio Vecchio
Ab initio detection of fuzzy amino acid tandem repeats in protein sequences. BMC Bioinform. 13 (S-3) (2012)
Claudio Felicioli, Filippo Geraci, Marco Pellegrini
Medium sized crawling made fast and easy through Lumbricus webis. ICMLC (2011)
Marco Pellegrini, M. Elena Renda, Alessio Vecchio
Detecting fuzzy amino acid tandem repeats in protein sequences. BCB (2011)
Filippo Geraci, Marco Pellegrini
Accurate Reconstruction of Single Individual Haplotypes for Personalized Medicine. ERCIM News 2010 (81) (2010)
Marco Furini, Filippo Geraci, Manuela Montangero, Marco Pellegrini
STIMO: STIll and MOving video storyboard for the web scenario. Multim. Tools Appl. 46 (1) (2010)
Michele Budinich, Bruno Codenotti, Filippo Geraci, Marco Pellegrini
On the Benefits of Keyword Spreading in Sponsored Search Auctions: An Experimental Analysis. EC-Web (2010)
Filippo Geraci, Marco Pellegrini
ReHap: An Integrated System for the Haplotype Assembly Problem from Shotgun Sequencing Data. BIOINFORMATICS (2010)
Marco Pellegrini, M. Elena Renda, Alessio Vecchio
TRStalker: an efficient heuristic for finding fuzzy tandem repeats. Bioinform. 26 (12) (2010)
Filippo Geraci, Marco Pellegrini
: A Framework for Single Individual Haplotyping from Next-Generation Sequencing Data. BIOSTEC (Selected Papers) (2010)
Filippo Geraci, Mauro Leoncini, Manuela Montangero, Marco Pellegrini, M. Elena Renda
K-Boost: A Scalable Algorithm for High-Quality Clustering of Microarray Gene Expression Data. J. Comput. Biol. 16 (6) (2009)
Marco Pellegrini
VISTO: Visual Storyboard for Web Video Browsing, Searching and Indexing. ERCIM News 2009 (77) (2009)
Filippo Geraci, Marco Pellegrini, M. Elena Renda
An Efficient Combinatorial Approach for Solving the DNA Motif Finding Problem. ISDA (2009)
Yon Dourisboure, Filippo Geraci, Marco Pellegrini
Extraction and classification of dense implicit communities in the Web graph. ACM Trans. Web 3 (2) (2009)
Marco Furini, Filippo Geraci, Manuela Montangero, Marco Pellegrini
On Using Clustering Algorithms to Produce Video Abstracts for the Web Scenario. CCNC (2008)
Loredana M. Genovese, Filippo Geraci, Marco Pellegrini
SpeedHap: An Accurate Heuristic for the Single Individual SNP Haplotyping Problem with Many Gaps, High Reading Error Rate and Low Coverage. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (4) (2008)
Filippo Geraci, Marco Pellegrini, M. Elena Renda
AMIC@: All MIcroarray Clusterings @ once. Nucleic Acids Res. 36 (Web-Server-Issue) (2008)
Filippo Geraci, Marco Pellegrini
Dynamic user-defined similarity searching in semi-structured text retrieval. Infoscale (2008)
Filippo Geraci, Marco Pellegrini, Marco Maggini, Fabrizio Sebastiani
Cluster Generation and Labeling for Web Snippets: A Fast, Accurate Hierarchical Solution. Internet Math. 3 (4) (2007)
Gianluca De Marco, Marco Pellegrini, Giovanni Sburlati
Faster deterministic wakeup in multiple access channels. Discret. Appl. Math. 155 (8) (2007)
Filippo Geraci, Mauro Leoncini, Manuela Montangero, Marco Pellegrini, M. Elena Renda
: A Scalable Algorithm for Microarray Gene Expression Data Clustering. HCI (12) (2007)
Yon Dourisboure, Filippo Geraci, Marco Pellegrini
Extraction and classification of dense communities in the web. WWW (2007)
Marco Furini, Filippo Geraci, Manuela Montangero, Marco Pellegrini
VISTO: visual storyboard for web video browsing. CIVR (2007)
Filippo Geraci, Mauro Leoncini, Manuela Montangero, Marco Pellegrini, Maria Elena Renda
High-Throughput Analysis of Gene Expression Data for Personalized Medicine. ERCIM News 2007 (69) (2007)
Marco Pellegrini, Giordano Fusco
Efficient IP table lookup via adaptive stratified trees with selective reconstructions. ACM J. Exp. Algorithmics 12 (2007)
Laura Galluccio, Giacomo Morabito, Sergio Palazzo, Marco Pellegrini, M. Elena Renda, Paolo Santi
Georoy: A location-aware enhancement to Viceroy peer-to-peer algorithm. Comput. Networks 51 (8) (2007)
Filippo Geraci, Marco Pellegrini
Dynamic User-Defined Similarity Searching in Semi-Structured Text Retrieval CoRR (2007)
Loredana M. Genovese, Filippo Geraci, Marco Pellegrini
A Fast and Accurate Heuristic for the Single Individual SNP Haplotyping Problem with Many Gaps, High Reading Error Rate and Low Coverage. WABI (2007)
Filippo Geraci, Marco Pellegrini, Paolo Pisati, Fabrizio Sebastiani
A scalable algorithm for high-quality clustering of web snippets. SAC (2006)
Filippo Geraci, Marco Pellegrini, Marco Maggini, Fabrizio Sebastiani
Cluster Generation and Cluster Labelling for Web Snippets: A Fast and Accurate Hierarchical Solution. SPIRE (2006)
Gianluca De Marco, Marco Pellegrini, Giovanni Sburlati
Faster Deterministic Wakeup in Multiple Access Channels. ICTCS (2005)
Filippo Geraci, Marco Pellegrini, Paolo Pisati, Luigi Rizzo
Packet classification via improved space decomposition techniques. INFOCOM (2005)
Marco Pellegrini, Giordano Fusco
Efficient IP Table Lookup via Adaptive Stratified Trees with Selective Reconstructions. ESA (2004)
Daniele V. Finocchiaro, Marco Pellegrini
On computing the diameter of a point set in high dimensional Euclidean space. Theor. Comput. Sci. 287 (2) (2002)
Marco Pellegrini
Randomizing combinatorial algorithms for linear programming when the dimension is moderately high. SODA (2001)
Marco Pellegrini
Rendering Equation Revisited: How to Avoid Explicit Visibility Computations. SODA (1999)
Marco Pellegrini
A Geometric Approach to Computing Higher Order Form Factors. SCG (1999)
Daniele V. Finocchiaro, Marco Pellegrini
On Computing the Diameter of a Point Set in High Dimensional Euclidean Space. ESA (1999)
Marco Pellegrini
Electrostatic Fields Without Singularities: Theory, Algorithms and Error Analysis. J. ACM 45 (6) (1998)
Marco Pellegrini
Monte Carlo Approximation of Form Factors with Error Bounded a Priori. Discret. Comput. Geom. 17 (3) (1997)
Marco Pellegrini
On Counting Pairs of Intersecting Segments and Off-Line Triangle Range Searching. Algorithmica 17 (4) (1997)
Marco Pellegrini
Repetitive Hidden Surface Removal for Polyhedra. J. Algorithms 21 (1) (1996)
Marco Pellegrini
On Point Location and Motion Planning among Simplices. SIAM J. Comput. 25 (5) (1996)
Marco Pellegrini
Electrostatic Fields without Singularities: Theory and Algorithms. SODA (1996)
Marco Pellegrini
Monte Carlo Approximation of Form Factors with Error Bounded a Priori. SCG (1995)
Marco Pellegrini
On Lines Missing Polyhedral Sets in 3-Space. Discret. Comput. Geom. 12 (1994)
Marco Pellegrini
On Collision-Free Placements of Simplices and the Closest Pair of Lines in 3-Space. SIAM J. Comput. 23 (1) (1994)
Marco Pellegrini
On point location and motion planning among simplices. STOC (1994)
Boris Aronov, Marco Pellegrini, Micha Sharir
On the Zone of a Surface in a Hyperplane Arrangement. Discret. Comput. Geom. 9 (1993)
Marco Pellegrini
Repetivive Hidden-Surface-Removal for Polyhedral Scenes. WADS (1993)
Marco Pellegrini
Ray Shooting on Triangles in 3-Space. Algorithmica 9 (5) (1993)
Pankaj K. Agarwal, Marco Pellegrini, Micha Sharir
Counting Circular Arc Intersections. SIAM J. Comput. 22 (4) (1993)
Marco Pellegrini
On Lines Missing Polyhedral Sets in 3-Space. SCG (1993)
Marco Pellegrini
Lower Bounds on Stabbing Lines in 3-space. Comput. Geom. 3 (1993)
Marco Pellegrini, Peter W. Shor
Finding Stabbing Lines in 3-Space. Discret. Comput. Geom. 8 (1992)
Marco Pellegrini
Incidence and Nearest-Neighbor Problems for Lines in 3-Space. SCG (1992)
Marco Pellegrini, Peter W. Shor
Finding Stabbing Lines in 3-Dimensional Space. SODA (1991)
Marco Pellegrini
Ray-shooting and Isotopy Classes of Lines in 3-Dimensional Space. WADS (1991)
Marco Pellegrini, Raimondo Sepe
SetLog, a tool for experimenting with new semantics. ACM SIGPLAN Notices 26 (2) (1991)
Marco Pellegrini
Stabbing and Ray Shooting in 3 Dimensional Space. SCG (1990)