Lorenzo Farina

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 14

Top Topics

Linkage Disequilibrium

Protein Interaction

Top Venues

VISIGRAPP (3: IVAPP)

Publications

Lorenzo Farina, Marco Rapelli, Barbara Mavi Masini, Claudio Casetti, Alessandro Bazzi
Maneuver Coordination Using V2I to Improve Traffic Efficiency at Intersections. VNC (2024)
Alice La Fata, Lorenzo Farina, Marina Bernardi, Gabriele Moser, Renato Procopio, Elisabetta Fiori
Prediction of Cloud-to-Ground Lightning Through Gaussian Process Regression with Satellite Thermal Infrared Imagery and Numerical Weather Prediction Modeling Data. IGARSS (2023)
Lorenzo Farina
Systems Precision Medicine: Putting the Pieces Back Together. Syst. 11 (7) (2023)
Caterina Alfano, Lorenzo Farina, Manuela Petti
Stratification of metastatic melanoma patients based on mutational signatures. BIBM (2023)
Davide Mascolo, Lorenzo Farina, Manuela Petti
Multi-layer network modelling of genomic and transcriptomic data to investigate the response to checkpoint inhibitors in NSCLC. BIBM (2023)
Federica Conte, Federico Papa, Paola Paci, Lorenzo Farina
StaRTrEK: in silico estimation of RNA half-lives from genome-wide time-course experiments without transcriptional inhibition. BMC Bioinform. 23 (1) (2022)
Caterina Alfano, Lorenzo Farina, Manuela Petti
Differential Co-expression Network Analysis to Investigate Sexual Dimorphism in Colon Cancer. BIBM (2022)
Giulia Fiscon, Federica Conte, Lorenzo Farina, Paola Paci
SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19. PLoS Comput. Biol. 17 (2) (2021)
Manuela Petti, Antonella Verrienti, Paola Paci, Lorenzo Farina
SEaCorAl: Identifying and contrasting the regulation-correlation bias in RNA-Seq paired expression data of patient groups. Comput. Biol. Medicine 135 (2021)
Stefania Colonnese, Manuela Petti, Lorenzo Farina, Gaetano Scarano, Francesca Cuomo
Protein-Protein Interaction Prediction via Graph Signal Processing. IEEE Access 9 (2021)
Michele Gentili, Leonardo Martini, Manuela Petti, Lorenzo Farina, Luca Becchetti
Biological Random Walks: integrating heterogeneous data in disease gene prioritization. CoRR (2020)
Manuela Petti, Daniele Bizzarri, Antonella Verrienti, Rosa Falcone, Lorenzo Farina
Connectivity Significance for Disease Gene Prioritization in an Expanding Universe. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (6) (2020)
Michele Gentili, Leonardo Martini, Manuela Petti, Lorenzo Farina, Luca Becchetti
Biological Random Walks: Integrating heterogeneous data in disease gene prioritization. CIBCB (2019)
Marco Angelini, Graziano Blasilli, Lorenzo Farina, Simone Lenti, Giuseppe Santucci
NEMESIS (NEtwork MEdicine analySIS): Towards Visual Exploration of Network Medicine Data. VISIGRAPP (3: IVAPP) (2019)
Paola Paci, Teresa Colombo, Lorenzo Farina
Computational analysis identifies a sponge interaction network between long non-coding RNAs and messenger RNAs in human breast cancer. BMC Syst. Biol. 8 (2014)
Marianna De Santis, Francesco Rinaldi, Emmanuela Falcone, Stefano Lucidi, Giulia Piaggio, Aymone Gurtner, Lorenzo Farina
Combining optimization and machine learning techniques for genome-wide prediction of human cell cycle-regulated genes. Bioinform. 30 (2) (2014)
Filippo Cacace, Lorenzo Farina, Alfredo Germani, Costanzo Manes
Internally Positive Representation of a Class of Continuous Time Systems. IEEE Trans. Autom. Control. 57 (12) (2012)
Filippo Cacace, Paola Paci, Valerio Cusimano, Alfredo Germani, Lorenzo Farina
Stochastic Modeling of Expression Kinetics Identifies Messenger Half-Lives and Reveals Sequential Waves of Co-ordinated Transcription and Decay. PLoS Comput. Biol. 8 (11) (2012)
Lorenzo Farina
Discussion on: "Representation of a Class of MIMO Systems via Internally Positive Realization". Eur. J. Control 16 (3) (2010)
Filippo Cacace, Lorenzo Farina, Alfredo Germani, Costanzo Manes
A method for Internally Positive Realization of continuous time systems. CDC (2010)
Lorenzo Farina, Alfredo Germani, Gabriella Mavelli, Pasquale Palumbo
Identification of Regulatory Network Motifs from Gene Expression Data. J. Math. Model. Algorithms 9 (3) (2010)
Filippo Cacace, Lorenzo Farina, Alfredo Germani, Pasquale Palumbo
Discrete-time models for gene transcriptional regulation networks. CDC (2010)
Nicola Soranzo, Mattia Zampieri, Lorenzo Farina, Claudio Altafini
mRNA stability and the unfolding of gene expression in the long-period yeast metabolic cycle. BMC Syst. Biol. 3 (2009)
Lorenzo Farina, Alberto De Santis, Samanta Salvucci, Giorgio Morelli, Ida Ruberti
Embedding mRNA Stability in Correlation Analysis of Time-Series Gene Expression Data. PLoS Comput. Biol. 4 (8) (2008)
Luca Benvenuti, Lorenzo Farina
The Geometry of the Reachability Set for Linear Discrete-time Systems with Positive Controls. SIAM J. Matrix Anal. Appl. 28 (2) (2006)
Luca Benvenuti, Lorenzo Farina
Nonnegative matrices in digital signal processing. Signal Process. 86 (9) (2006)
Luca Benvenuti, Lorenzo Farina
Correction to "A Note on Minimality of Positive Realizations". IEEE Trans. Circuits Syst. I Regul. Pap. (1) (2006)
Luca Benvenuti, Lorenzo Farina
Eigenvalue regions for positive systems. Syst. Control. Lett. 51 (3-4) (2004)
Fausto Borghetti, Lorenzo Farina, Piero Malcovati, Franco Maloberti
A high speed and low power CMOS current comparator for photon counting systems. ISCAS (1) (2004)
Luca Benvenuti, Lorenzo Farina
A tutorial on the positive realization problem. IEEE Trans. Autom. Control. 49 (5) (2004)
Luca Benvenuti, Lorenzo Farina
Minimal positive realizations: a survey of recent results and open problems. Kybernetika 39 (2) (2003)
Luca Benvenuti, Lorenzo Farina
How many compartments do we really need? [LTI systems]. ACC (2002)
Luca Benvenuti, Alberto De Santis, Lorenzo Farina
Embedding a-priori positivity in systems modelling. ACC (2002)
Luca Benvenuti, Lorenzo Farina
Positive and compartmental systems. IEEE Trans. Autom. Control. 47 (2) (2002)
Alberto De Santis, Lorenzo Farina
Identification of positive linear systems with Poisson output transformation. Autom. 38 (5) (2002)
Luca Benvenuti, Alberto De Santis, Lorenzo Farina
On model consistency in compartmental systems identification. Autom. 38 (11) (2002)
Luca Benvenuti, Lorenzo Farina
Linear programming approach to constrained feedback control. Int. J. Syst. Sci. 33 (1) (2002)
Maria Elena Valcher, Lorenzo Farina
An Algebraic Approach to the Construction of Polyhedral Invariant Cones. SIAM J. Matrix Anal. Appl. 22 (2) (2000)
Lorenzo Farina, Luca Benvenuti
Polyhedral reachable set with positive controls. Math. Control. Signals Syst. 10 (4) (1997)
Luca Benvenuti, Lorenzo Farina
Discrete-time filtering via charge routing networks. Signal Process. 49 (3) (1996)