Jesper L. R. Andersson

Publication Activity (10 Years)

Years Active: 2002-2022
Publications (10 Years): 18

Top Topics

Processing Pipeline

Top Venues

IEEE Trans. Medical Imaging

Medical Image Anal.

Publications

Anna I. Blazejewska, Thomas Witzel, Jesper L. R. Andersson, Lawrence L. Wald, Jonathan R. Polimeni
Slice-direction geometric distortion evaluation and correction with reversed slice-select gradient acquisitions. NeuroImage 264 (2022)
Jennifer Stine Elam, Matthew F. Glasser, Michael P. Harms, Stamatios N. Sotiropoulos, Jesper L. R. Andersson, Gregory C. Burgess, Sandra W. Curtiss, Robert Oostenveld, Linda J. Larson-Prior, Jan-Mathijs Schoffelen, Michael R. Hodge, Eileen A. Cler, Daniel M. Marcus, Deanna M. Barch, Essa Yacoub, Stephen M. Smith, Kamil Ugurbil, David C. Van Essen
The Human Connectome Project: A retrospective. NeuroImage 244 (2021)
Fidel Alfaro-Almagro, Paul McCarthy, Soroosh Afyouni, Jesper L. R. Andersson, Matteo Bastiani, Karla L. Miller, Thomas E. Nichols, Stephen M. Smith
Confound modelling in UK Biobank brain imaging. NeuroImage 224 (2021)
E. Thompson, Ali Reza Mohammadi-Nejad, Emma C. Robinson, Jesper L. R. Andersson, Saâd Jbabdi, Matthew F. Glasser, Matteo Bastiani, Stamatios N. Sotiropoulos
Non-negative data-driven mapping of structural connections with application to the neonatal brain. NeuroImage 222 (2020)
Frederik J. Lange, John Ashburner, Stephen M. Smith, Jesper L. R. Andersson
A Symmetric Prior for the Regularisation of Elastic Deformations: Improved anatomical plausibility in nonlinear image registration. NeuroImage 219 (2020)
Frederik J. Lange, Stephen M. Smith, Mads F. Bertelsen, Alexandre A. Khrapitchev, Paul R. Manger, Rogier B. Mars, Jesper L. R. Andersson
Multimodal MRI Template Creation in the Ring-Tailed Lemur and Rhesus Macaque. WBIR (2020)
Luke Baxter, Sean P. Fitzgibbon, Fiona Moultrie, Sezgi Goksan, Mark Jenkinson, Stephen M. Smith, Jesper L. R. Andersson, Eugene P. Duff, Rebeccah Slater
Optimising neonatal fMRI data analysis: Design and validation of an extended dHCP preprocessing pipeline to characterise noxious-evoked brain activity in infants. NeuroImage 186 (2019)
Matteo Bastiani, Jesper L. R. Andersson, Lucilio Cordero-Grande, Maria Murgasova, Jana Hutter, Anthony N. Price, Antonios Makropoulos, Sean P. Fitzgibbon, Emer J. Hughes, Daniel Rueckert, Suresh Victor, Mary A. Rutherford, A. David Edwards, Stephen M. Smith, Jacques-Donald Tournier, Joseph V. Hajnal, Saâd Jbabdi, Stamatios N. Sotiropoulos
Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. NeuroImage 185 (2019)
Matteo Bastiani, Michiel Cottaar, Sean P. Fitzgibbon, Sana Suri, Fidel Alfaro-Almagro, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson
Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction. NeuroImage 184 (2019)
Joo-won Kim, Jesper L. R. Andersson, Alan C. Seifert, Peng Sun, Sheng-Kwei Song, Courtney Dula, Robert T. Naismith, Junqian Xu
Incorporating non-linear alignment and multi-compartmental modeling for improved human optic nerve diffusion imaging. NeuroImage 196 (2019)
Jesper L. R. Andersson, Mark S. Graham, Ivana Drobnjak, Hui Zhang, Jon Campbell
Susceptibility-induced distortion that varies due to motion: Correction in diffusion MR without acquiring additional data. NeuroImage 171 (2018)
Fidel Alfaro-Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N. Sotiropoulos, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander, Hui Zhang, Iulius Dragonu, Paul M. Matthews, Karla L. Miller, Stephen M. Smith
Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage 166 (2018)
Jesper L. R. Andersson, Mark S. Graham, Ivana Drobnjak, Hui Zhang, Nicola Filippini, Matteo Bastiani
Towards a comprehensive framework for movement and distortion correction of diffusion MR images: Within volume movement. NeuroImage 152 (2017)
Falk Eippert, Yazhuo Kong, Anderson M. Winkler, Jesper L. R. Andersson, Jürgen Finsterbusch, Christian Büchel, Jonathan C. W. Brooks, Irene Tracey
Investigating resting-state functional connectivity in the cervical spinal cord at 3 T. NeuroImage 147 (2017)
Jesper L. R. Andersson, Stamatios N. Sotiropoulos
An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging. NeuroImage 125 (2016)
Stamatios N. Sotiropoulos, Moisés Hernández-Fernández, An T. Vu, Jesper L. R. Andersson, Steen Moeller, Essa Yacoub, Christophe Lenglet, Kamil Ugurbil, Timothy Edward John Behrens, Saâd Jbabdi
Fusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the Human Connectome Project. NeuroImage 134 (2016)
Matthew F. Glasser, Timothy S. Coalson, Emma C. Robinson, Carl D. Hacker, John W. Harwell, Essa Yacoub, Kamil Ugurbil, Jesper L. R. Andersson, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith, David C. Van Essen
A multi-modal parcellation of human cerebral cortex. Nat. 536 (7615) (2016)
Jesper L. R. Andersson, Mark S. Graham, Eniko Zsoldos, Stamatios N. Sotiropoulos
Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images. NeuroImage 141 (2016)
An T. Vu, Edward J. Auerbach, Christophe Lenglet, Steen Moeller, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Essa Yacoub, Kamil Ugurbil
High resolution whole brain diffusion imaging at 7 T for the Human Connectome Project. NeuroImage 122 (2015)
Ivor J. A. Simpson, Manuel Jorge Cardoso, Marc Modat, David M. Cash, Mark W. Woolrich, Jesper L. R. Andersson, Julia A. Schnabel, Sébastien Ourselin
Probabilistic non-linear registration with spatially adaptive regularisation. Medical Image Anal. 26 (1) (2015)
Jesper L. R. Andersson, Stamatios N. Sotiropoulos
Non-parametric representation and prediction of single- and multi-shell diffusion-weighted MRI data using Gaussian processes. NeuroImage 122 (2015)
Peter V. Kochunov, Neda Jahanshad, Daniel S. Marcus, Anderson M. Winkler, Emma Sprooten, Thomas E. Nichols, Susan N. Wright, L. Elliot Hong, Binish Patel, Timothy Behrens, Saâd Jbabdi, Jesper L. R. Andersson, Christophe Lenglet, Essa Yacoub, Steen Moeller, Eddie Auerbach, Kamil Ugurbil, Stamatios N. Sotiropoulos, Rachel M. Brouwer, Bennett A. Landman, Hervé Lemaître, Anouk den Braber, Marcel P. Zwiers, Stuart Ritchie, Kimm van Hulzen, Laura Almasy, Joanne E. Curran, Greig I. de Zubicaray, Ravi Duggirala, Peter T. Fox
Heritability of fractional anisotropy in human white matter: A comparison of Human Connectome Project and ENIGMA-DTI data. NeuroImage 111 (2015)
Emma C. Robinson, Saâd Jbabdi, Matthew F. Glasser, Jesper L. R. Andersson, Gregory C. Burgess, Michael P. Harms, Stephen M. Smith, David C. Van Essen, Mark Jenkinson
MSM: A new flexible framework for Multimodal Surface Matching. NeuroImage 100 (2014)
Ivor J. A. Simpson, Mark William Woolrich, Jesper L. R. Andersson, Adrian R. Groves, Julia A. Schnabel
Ensemble Learning Incorporating Uncertain Registration. IEEE Trans. Medical Imaging 32 (4) (2013)
Emma C. Robinson, Saâd Jbabdi, Jesper L. R. Andersson, Stephen M. Smith, Matthew F. Glasser, David C. Van Essen, Gregory C. Burgess, Michael P. Harms, Deanna M. Barch, Mark Jenkinson
Multimodal Surface Matching: Fast and Generalisable Cortical Registration Using Discrete Optimisation. IPMI (2013)
Kamil Ugurbil, Junqian Xu, Edward J. Auerbach, Steen Moeller, An T. Vu, Julio Martin Duarte-Carvajalino, Christophe Lenglet, Xiaoping Wu, Sebastian Schmitter, Pierre-François van de Moortele, John P. Strupp, Guillermo Sapiro, Federico De Martino, Dingxin Wang, Noam Harel, Michael Garwood, Liyong Chen, David A. Feinberg, Stephen M. Smith, Karla L. Miller, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Timothy Edward John Behrens, Matthew F. Glasser, David C. Van Essen, Essa Yacoub
Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. NeuroImage 80 (2013)
Matthew F. Glasser, Stamatios N. Sotiropoulos, J. Anthony Wilson, Timothy S. Coalson, Bruce Fischl, Jesper L. R. Andersson, Junqian Xu, Saâd Jbabdi, Matthew A. Webster, Jonathan R. Polimeni, David C. Van Essen, Mark Jenkinson
The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage 80 (2013)
Marius de Groot, Meike W. Vernooij, Stefan Klein, Mohammad Arfan Ikram, Frans M. Vos, Stephen M. Smith, Wiro J. Niessen, Jesper L. R. Andersson
Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration. NeuroImage 76 (2013)
Stamatios N. Sotiropoulos, Saâd Jbabdi, Junqian Xu, Jesper L. R. Andersson, Steen Moeller, Edward J. Auerbach, Matthew F. Glasser, Moisés Hernández, Guillermo Sapiro, Mark Jenkinson, David A. Feinberg, Essa Yacoub, Christophe Lenglet, David C. Van Essen, Kamil Ugurbil, Timothy Edward John Behrens
Advances in diffusion MRI acquisition and processing in the Human Connectome Project. NeuroImage 80 (2013)
Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Mark William Woolrich, Kamil Ugurbil, Timothy Edward John Behrens
RubiX: Combining Spatial Resolutions for Bayesian Inference of Crossing Fibers in Diffusion MRI. IEEE Trans. Medical Imaging 32 (6) (2013)
Stephen M. Smith, Christian F. Beckmann, Jesper L. R. Andersson, Edward J. Auerbach, Janine D. Bijsterbosch, Gwenaëlle Douaud, Eugene P. Duff, David A. Feinberg, Ludovica Griffanti, Michael P. Harms, Michael Kelly, Timothy O. Laumann, Karla L. Miller, Steen Moeller, Steven E. Petersen, Jonathan D. Power, Gholamreza Salimi Khorshidi, Abraham Z. Snyder, An T. Vu, Mark William Woolrich, Junqian Xu, Essa Yacoub, Kamil Ugurbil, David C. Van Essen, Matthew F. Glasser
Resting-state fMRI in the Human Connectome Project. NeuroImage 80 (2013)
Yazhuo Kong, Mark Jenkinson, Jesper L. R. Andersson, Irene Tracey, Jonathan C. W. Brooks
Assessment of physiological noise modelling methods for functional imaging of the spinal cord. NeuroImage 60 (2) (2012)
Ivor J. A. Simpson, Mark William Woolrich, Jesper L. R. Andersson, Adrian R. Groves, Julia A. Schnabel
A probabilistic non-rigid registration framework using local noise estimates. ISBI (2012)
Ivor J. A. Simpson, Julia A. Schnabel, Adrian R. Groves, Jesper L. R. Andersson, Mark William Woolrich
Probabilistic inference of regularisation in non-rigid registration. NeuroImage 59 (3) (2012)
Courtney A. Bishop, Mark Jenkinson, Jesper L. R. Andersson, Jérôme Declerck, Dorit Merhof
Novel Fast Marching for Automated Segmentation of the Hippocampus (FMASH): Method and validation on clinical data. NeuroImage 55 (3) (2011)
Arno Klein, Jesper L. R. Andersson, Babak A. Ardekani, John Ashburner, Brian B. Avants, Ming-Chang Chiang, Gary E. Christensen, D. Louis Collins, James C. Gee, Pierre Hellier, Joo Hyun Song, Mark Jenkinson, Claude Lepage, Daniel Rueckert, Paul M. Thompson, Tom Vercauteren, Roger P. Woods, J. John Mann, Ramin V. Parsey
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage 46 (3) (2009)
Jesper L. R. Andersson
Maximum a posteriori estimation of diffusion tensor parameters using a Rician noise model: Why, how and but. NeuroImage 42 (4) (2008)
Saâd Jbabdi, Mark W. Woolrich, Jesper L. R. Andersson, T. E. J. Behrens
A Bayesian framework for global tractography. NeuroImage 37 (1) (2007)
Thomas E. Nichols, Matthew Brett, Jesper L. R. Andersson, Tor D. Wager, Jean-Baptiste Poline
Valid conjunction inference with the minimum statistic. NeuroImage 25 (3) (2005)
Jesper L. R. Andersson, Stefan Skare, John Ashburner
How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging. NeuroImage 20 (2) (2003)
Jesper L. R. Andersson, Stefan Skare
A Model-Based Method for Retrospective Correction of Geometric Distortions in Diffusion-Weighted EPI. NeuroImage 16 (1) (2002)