Jean-Marc Schwartz

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 13

Top Topics

Immune Response

Image Decomposition

Drosophila Melanogaster

Top Venues

PLoS Comput. Biol.

Publications

Raquel Lopes Costa, Luiz M. R. Gadelha Jr., Mirela D'arc, Marcelo Ribeiro-Alves, David L. Robertson, Jean-Marc Schwartz, Marcelo A. Soares, Fábio Porto
HIHISIV: a database of gene expression in HIV and SIV host immune response. BMC Bioinform. 25 (1) (2024)
Joanne Watson, Michael Smith, Chiara Francavilla, Jean-Marc Schwartz
SubcellulaRVis: a web-based tool to simplify and visualise subcellular compartment enrichment. Nucleic Acids Res. 50 (W1) (2022)
Joseph H. R. Hetmanski, Matthew C. Jones, Fatima Chunara, Jean-Marc Schwartz, Patrick T. Caswell
Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migration. PLoS Comput. Biol. 17 (3) (2021)
Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz
Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines. Comput. Biol. Chem. 80 (2019)
Jamie Soul, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz
SkeletalVis: an exploration and meta-analysis data portal of cross-species skeletal transcriptomics data. Bioinform. 35 (13) (2019)
Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz
Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis. BMC Syst. Biol. 12 (1) (2018)
Ruth Alexandra Stoney, Jean-Marc Schwartz, David L. Robertson, Goran Nenadic
Using set theory to reduce redundancy in pathway sets. BMC Bioinform. 19 (1) (2018)
Petronela Buiga, Jamie Soul, Jean-Marc Schwartz
A meta-analysis portal for human breast cancer transcriptomics data: BreastCancerVis. BIBM (2018)
Stephen P. Chapman, Marcelo Trindade dos Santos, Giles N. Johnson, Mauricio Vieira Kritz, Jean-Marc Schwartz
Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtii. Biosyst. 162 (2017)
Emyr Bakker, Kun Tian, Luciano Mutti, Constantinos Demonacos, Jean-Marc Schwartz, Marija Krstic-Demonacos
Insight into glucocorticoid receptor signalling through interactome model analysis. PLoS Comput. Biol. 13 (11) (2017)
Jamie Soul, Sara L. Dunn, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz
PhenomeScape: a cytoscape app to identify differentially regulated sub-networks using known disease associations. Bioinform. 32 (24) (2016)
Joseph H. R. Hetmanski, Egor Zindy, Jean-Marc Schwartz, Patrick T. Caswell
A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell Invasion. PLoS Comput. Biol. 12 (5) (2016)
Oyebode J. Oyeyemi, Oluwafemi Davies, David L. Robertson, Jean-Marc Schwartz
A logical model of HIV-1 interactions with the T-cell activation signalling pathway. Bioinform. 31 (7) (2015)
Michelle Hussain, Benjamin Stutchbury, Kun Tian, Rengül Çetin-Atalay, Jean-Marc Schwartz, Marija Krstic-Demonacos
Applications of p53 interactome analysis to personalised drug discovery. IWBBIO (2014)
Jean-Marc Schwartz, Peter Neal Taylor
In silico prediction of elementary mode fluxes. IWBBIO (2014)
Chengkun Wu, Jean-Marc Schwartz, Goran Nenadic
PathNER: a tool for systematic identification of biological pathway mentions in the literature. BMC Syst. Biol. 7 (S-3) (2013)
Thomas Williamson, Delali A. Adiamah, Jean-Marc Schwartz, Lubomira Stateva
Exploring the genetic control of glycolytic oscillations in Saccharomyces Cerevisiae. BMC Syst. Biol. 6 (2012)
Yu-Yao Tseng, Suzanne M. Hunt, Christian Heintzen, Susan K. Crosthwaite, Jean-Marc Schwartz
Circadian Clock and Its Temperature Compensation. PLoS Comput. Biol. 8 (3) (2012)
Karin Radrich, Yoshimasa Tsuruoka, Paul D. Dobson, Albert Gevorgyan, Neil Swainston, Gino Baart, Jean-Marc Schwartz
Integration of metabolic databases for the reconstruction of genome-scale metabolic networks. BMC Syst. Biol. 4 (2010)
Delali A. Adiamah, Julia Handl, Jean-Marc Schwartz
Streamlining the construction of large-scale dynamic models using generic kinetic equations. Bioinform. 26 (10) (2010)
Thomas Williamson, Jean-Marc Schwartz, Douglas B. Kell, Lubomira Stateva
Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiae. BMC Syst. Biol. 3 (2009)
Jose C. Nacher, Jean-Marc Schwartz, Minoru Kanehisa, Tatsuya Akutsu
Identification of metabolic units induced by environmental signals. ISMB (Supplement of Bioinformatics) (2006)
Jean-Marc Schwartz, Minoru Kanehisa
Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis. BMC Bioinform. 7 (2006)
Jean-Marc Schwartz, Marc Denninger, Denis Rancourt, Christian Moisan, Denis Laurendeau
Modelling liver tissue properties using a non-linear visco-elastic model for surgery simulation. Medical Image Anal. 9 (2) (2005)
Jean-Marc Schwartz, Minoru Kanehisa
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes. ECCB/JBI (2005)
Marielle Mokhtari, François Bernier, François Lemieux, H. Martel, Jean-Marc Schwartz, Denis Laurendeau, Alexandra Branzan Albu
Virtual Environment and Sensori-Motor Activities: Haptic, Auditory and Olfactory Devices. WSCG (Posters) (2004)
Alexandra Branzan Albu, Jean-Marc Schwartz, Denis Laurendeau, Christian Moisan
Integrating Geometric and Biomechanical Models of a Liver Tumour for Cryosurgery Simulation. IS4TH (2003)
Jean-Marc Schwartz, Ève Langelier, Christian Moisan, Denis Laurendeau
Non-linear Soft Tissue Deformations for the Simulation of Percutaneous Surgeries. MICCAI (2001)