Jason Ernst

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 11

Top Topics

Linkage Disequilibrium

Peer Review Process

Routing Protocol

Top Venues

ADHOCNETS/TRIDENTCOM

Publications

Ha Vu, Zane Koch, Petko Fiziev, Jason Ernst
A framework for group-wise summarization and comparison of chromatin state annotations. Bioinform. 39 (1) (2023)
Fatemeh Safari, Izabela Savic, Herb Kunze, Jason Ernst, Daniel Gillis
A Review of AI-based MANET Routing Protocols. WiMob (2023)
Fatemeh Safari, Herb Kunze, Jason Ernst, Daniel Gillis
A Novel Cross-Layer Adaptive Fuzzy-Based Ad Hoc On-Demand Distance Vector Routing Protocol for MANETs. IEEE Access 11 (2023)
Brent J. Hecht, Lauren Wilcox, Jeffrey P. Bigham, Johannes Schöning, Ehsan Hoque, Jason Ernst, Yonatan Bisk, Luigi De Russis, Lana Yarosh, Bushra Anjum, Danish Contractor, Cathy Wu
It's Time to Do Something: Mitigating the Negative Impacts of Computing Through a Change to the Peer Review Process. CoRR (2021)
Izabela Savic, Marshall Asch, Keefer Rourke, Fatemeh Safari, Patrick Houlding, Jeremie Fraeys de Veubeke, Jason Ernst, Daniel Gillis
M-ODD: A Standard Protocol for Reporting MANET Related Models, Simulations, and Findings. ADHOCNETS/TRIDENTCOM (2021)
Nic Durish, Rekkab Gill, Patrick Houlding, Charlie Flowers, Inez Shiwak, Jason Ernst, Daniel Gillis
Co-designing a community-led Internet assessment tool in Rigolet, Nunatsiavut, Canada. ISTAS (2021)
Amnon Catav, Boyang Fu, Yazeed Zoabi, Ahuva Weiss-Meilik, Noam Shomron, Jason Ernst, Sriram Sankararaman, Ran Gilad-Bachrach
Marginal Contribution Feature Importance - an Axiomatic Approach for Explaining Data. ICML (2021)
Amnon Catav, Boyang Fu, Jason Ernst, Sriram Sankararaman, Ran Gilad-Bachrach
Marginal Contribution Feature Importance - an Axiomatic Approach for The Natural Case. CoRR (2020)
Artur Tomasz Jaroszewicz, Jason Ernst
An integrative approach for fine-mapping chromatin interactions. Bioinform. 36 (6) (2020)
Dat Duong, Jennifer Zou, Farhad Hormozdiari, Jae Hoon Sul, Jason Ernst, Buhm Han, Eleazar Eskin
Using genomic annotations increases statistical power to detect eGenes. Bioinform. 32 (12) (2016)
Roadmap Epigenomics Consortium, Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi Moussavi, Pouya Kheradpour, ZhiZhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald T. Quon, Richard S. Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaick Carles, Jesse R. Dixon, Kyle Kai-How Farh, Soheil Feizi, Rosa Karlic, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane J. Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard C. Sallari, Kyle T. Siebenthall, Nicholas A. Sinnott-Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy J. Farnham, Susan J. Fisher, David Haussler, Steven J. M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil R. Sunyaev, James A. Thomson, Thea D. Tlsty, Li-Huei Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, Bradley E. Bernstein, Joseph F. Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljevic, Bing Ren, John A. Stamatoyannopoulos, Ting Wang, Manolis Kellis
Integrative analysis of 111 reference human epigenomes Open. Nat. 518 (7539) (2015)
Nisha Rajagopal, Wei Xie, Yan Li, Uli Wagner, Wei Wang, John A. Stamatoyannopoulos, Jason Ernst, Manolis Kellis, Bing Ren
RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State. PLoS Comput. Biol. 9 (3) (2013)
Marcel H. Schulz, William E. Devanny, Anthony Gitter, Shan Zhong, Jason Ernst, Ziv Bar-Joseph
DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data. BMC Syst. Biol. 6 (2012)
Jason Ernst, Manolis Kellis
Discovery and Characterization of Chromatin States for Systematic Annotation of the Human Genome. RECOMB (2011)
Alexei Vazquez, Qasim K. Beg, Marcio A. de Menezes, Jason Ernst, Ziv Bar-Joseph, Albert-László Barabási, László G. Boros, Zoltán N. Oltvai
Impact of the solvent capacity constraint on E. coli metabolism. BMC Syst. Biol. 2 (2008)
Hongbing Fan, Jason Ernst, Yu-Liang Wu
Customized Reconfigurable Interconnection Networks for multiple application SOCS. FPL (2008)
Hongbing Fan, Christian Hundt, Yu-Liang Wu, Jason Ernst
Algorithms and Implementation for Interconnection Graph Problem. COCOA (2008)
Jason Ernst, Qasim K. Beg, Krin A. Kay, Gábor Balázsi, Zoltán N. Oltvai, Ziv Bar-Joseph
. PLoS Comput. Biol. 4 (3) (2008)
Jason Ernst, Ziv Bar-Joseph
STEM: a tool for the analysis of short time series gene expression data. BMC Bioinform. 7 (2006)
Jason Ernst, Gerard J. Nau, Ziv Bar-Joseph
Clustering short time series gene expression data. ISMB (Supplement of Bioinformatics) (2005)