Ester Bonmati

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 33

Top Topics

Ultrasound Images

Automatic Segmentation

Top Venues

Int. J. Comput. Assist. Radiol. Surg.

Medical Imaging: Image-Guided Procedures

Medical Image Anal.

Publications

Iani J. M. B. Gayo, Shaheer U. Saeed, Ester Bonmati, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
The distinct roles of reinforcement learning between pre-procedure and intra-procedure planning for prostate biopsy. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
Active learning using adaptable task-based prioritisation. Medical Image Anal. 95 (2024)
Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
Competing for pixels: a self-play algorithm for weakly-supervised segmentation. CoRR (2024)
Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
Active learning using adaptable task-based prioritisation. CoRR (2022)
Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks. IEEE Trans. Medical Imaging 41 (6) (2022)
João Ramalhinho, Bongjin Koo, Nina Montaña Brown, Shaheer U. Saeed, Ester Bonmati, Kurinchi Gurusamy, Stephen P. Pereira, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT. Int. J. Comput. Assist. Radiol. Surg. 17 (8) (2022)
Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
Voice-assisted Image Labelling for Endoscopic Ultrasound Classification using Neural Networks. CoRR (2021)
Alexander Grimwood, João Ramalhinho, Zachary M. C. Baum, Nina Montaña Brown, Gavin J. Johnson, Yipeng Hu, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt, Ester Bonmati
Endoscopic Ultrasound Image Synthesis Using a Cycle-Consistent Adversarial Network. ASMUS@MICCAI (2021)
Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoff J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
Image quality assessment for closed-loop computer-assisted lung ultrasound. Medical Imaging: Image-Guided Procedures (2021)
Stephen A. Thompson, Thomas Dowrick, Mian Ahmad, Goufang Xiao, Bongjin Koo, Ester Bonmati, Kim Kahl, Matthew J. Clarkson
SciKit-Surgery: compact libraries for surgical navigation. Int. J. Comput. Assist. Radiol. Surg. 15 (7) (2020)
Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
DeepReg: a deep learning toolkit for medical image registration. J. Open Source Softw. 5 (55) (2020)
Nina Montaña Brown, Yunguan Fu, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alex Grimwood, Zhe Min, Ester Bonmati, Tom Vercauteren, Matthew J. Clarkson, Yipeng Hu
Introduction to Medical Image Registration with DeepReg, Between Old and New. CoRR (2020)
Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
DeepReg: a deep learning toolkit for medical image registration. CoRR (2020)
Alex Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification. MICCAI (3) (2020)
Alexander Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification. CoRR (2020)
Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoffrey J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
Image quality assessment for closed-loop computer-assisted lung ultrasound. CoRR (2020)
Nooshin Ghavami, Yipeng Hu, Eli Gibson, Ester Bonmati, Mark Emberton, Caroline M. Moore, Dean C. Barratt
Automatic segmentation of prostate MRI using convolutional neural networks: Investigating the impact of network architecture on the accuracy of volume measurement and MRI-ultrasound registration. Medical Image Anal. 58 (2019)
Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
Adversarial Deformation Regularization for Training Image Registration Neural Networks. CoRR (2018)
Ester Bonmati, Yipeng Hu, Eli Gibson, Laura Uribarri, Geri Keane, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
Determination of optimal ultrasound planes for the initialisation of image registration during endoscopic ultrasound-guided procedures. Int. J. Comput. Assist. Radiol. Surg. 13 (6) (2018)
Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
Adversarial Deformation Regularization for Training Image Registration Neural Networks. MICCAI (1) (2018)
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
Weakly-supervised convolutional neural networks for multimodal image registration. Medical Image Anal. 49 (2018)
Nooshin Ghavami, Yipeng Hu, Ester Bonmati, Rachael Rodell, Eli Gibson, Caroline M. Moore, Dean C. Barratt
Automatic slice segmentation of intraoperative transrectal ultrasound images using convolutional neural networks. Medical Imaging: Image-Guided Procedures (2018)
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network. Medical Imaging: Image-Guided Procedures (2018)
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration. CoRR (2018)
Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
Automatic Multi-Organ Segmentation on Abdominal CT With Dense V-Networks. IEEE Trans. Medical Imaging 37 (8) (2018)
Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
Label-driven weakly-supervised learning for multimodal deformarle image registration. ISBI (2018)
Ester Bonmati, Anton Bardera, Miquel Feixas, Imma Boada
Novel Brain Complexity Measures Based on Information Theory. Entropy 20 (7) (2018)
Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
Towards Image-Guided Pancreas and Biliary Endoscopy: Automatic Multi-organ Segmentation on Abdominal CT with Dense Dilated Networks. MICCAI (1) (2017)
Ester Bonmati, Anton Bardera, Imma Boada
Brain parcellation based on information theory. Comput. Methods Programs Biomed. 151 (2017)
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network. CoRR (2017)
Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
Label-driven weakly-supervised learning for multimodal deformable image registration. CoRR (2017)
Ester Bonmati, Yipeng Hu, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
Assessment of Electromagnetic Tracking Accuracy for Endoscopic Ultrasound. CARE@MICCAI (2016)
Yipeng Hu, Ester Bonmati, Eli Gibson, John H. Hipwell, David J. Hawkes, Steven Bandula, Stephen P. Pereira, Dean C. Barratt
2D-3D Registration Accuracy Estimation for Optimised Planning of Image-Guided Pancreatobiliary Interventions. MICCAI (1) (2016)
Ester Bonmati, Anton Bardera, Imma Boada, Miquel Feixas, Mateu Sbert
Hierarchical clustering based on the information bottleneck method using a control process. Pattern Anal. Appl. 18 (3) (2015)