Vincent Moulton

ORCID

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 50

Top Venues

Publications

Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
Orienting undirected phylogenetic networks. J. Comput. Syst. Sci. 140 (2024)
David Bryant, Katharina T. Huber, Vincent Moulton, Paul F. Tupper
Diversities and the Generalized Circumradius. Discret. Comput. Geom. 70 (4) (2023)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Shared ancestry graphs and symbolic arboreal maps. CoRR (2023)
Vincent Moulton, Taoyang Wu
Planar Rooted Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (2) (2023)
Marc Hellmuth, Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz, Peter F. Stadler
Injective Split Systems. Graphs Comb. 39 (4) (2023)
Andrew R. Francis, Katharina T. Huber, Vincent Moulton, Taoyang Wu
-cactuses. Adv. Appl. Math. 142 (2023)
Leo van Iersel, Vincent Moulton, Yukihiro Murakami
Polynomial invariants for cactuses. Inf. Process. Lett. 182 (2023)
Carsten R. Seemann, Vincent Moulton, Peter F. Stadler, Marc Hellmuth
Planar median graphs and cubesquare-graphs. Discret. Appl. Math. 331 (2023)
Katharina T. Huber, Vincent Moulton, Andreas Spillner
Computing consensus networks for collections of 1-nested phylogenetic networks. J. Graph Algorithms Appl. 27 (7) (2023)
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami
Level-2 networks from shortest and longest distances. Discret. Appl. Math. 306 (2022)
Vincent Moulton, Taoyang Wu
Posets and Spaces of $k$-Noncrossing RNA Structures. SIAM J. Discret. Math. 36 (3) (2022)
Salma Alzahrani, Christopher Applegate, David Swarbreck, Tamas Dalmay, Leighton Folkes, Vincent Moulton
Degradome Assisted Plant MicroRNA Prediction Under Alternative Annotation Criteria. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (6) (2022)
Vincent Moulton, Andreas Spillner
Order Distances and Split Systems. Order 39 (2) (2022)
Leo van Iersel, Sjors Kole, Vincent Moulton, Leonie Nipius
An algorithm for reconstructing level-2 phylogenetic networks from trinets. Inf. Process. Lett. 178 (2022)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Overlaid species forests. Discret. Appl. Math. 309 (2022)
Leo van Iersel, Sjors Kole, Vincent Moulton, Leonie Nipius
An algorithm for reconstructing level-2 phylogenetic networks from trinets. CoRR (2021)
Carsten R. Seemann, Vincent Moulton, Peter F. Stadler, Marc Hellmuth
Planar Median Graphs and Cubesquare-Graphs. CoRR (2021)
Katharina T. Huber, Vincent Moulton, Andreas Spillner
Optimal realizations and the block decomposition of a finite metric space. Discret. Appl. Math. 302 (2021)
Katharina T. Huber, Simone Linz, Vincent Moulton
Weakly displaying trees in temporal tree-child network. CoRR (2020)
Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
Evolution through segmental duplications and losses: a Super-Reconciliation approach. Algorithms Mol. Biol. 15 (1) (2020)
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
Recognizing and realizing cactus metrics. Inf. Process. Lett. 157 (2020)
Leo van Iersel, Vincent Moulton, Yukihiro Murakami
phylogenetic networks from distances. Adv. Appl. Math. 120 (2020)
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
Rooting for phylogenetic networks. CoRR (2019)
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
Recognizing and realizing cactus metrics. CoRR (2019)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Three-Way Symbolic Tree-Maps and Ultrametrics. J. Classif. 36 (3) (2019)
Vincent Moulton, Andreas Spillner
Order distances and split systems. CoRR (2019)
Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. Theor. Comput. Sci. 760 (2019)
Katharina T. Huber, Vincent Moulton, Taoyang Wu
Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks. J. Classif. 36 (2) (2019)
Katharina T. Huber, Jack H. Koolen, Vincent Moulton
The polytopal structure of the tight-span of a totally split-decomposable metric. Discret. Math. 342 (3) (2019)
Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
Reconstructing the History of Syntenies Through Super-Reconciliation. RECOMB-CG (2018)
Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Mike A. Steel
Combinatorial properties of triplet covers for binary trees. Adv. Appl. Math. 99 (2018)
Sarah Bastkowski, Daniel Mapleson, Andreas Spillner, Taoyang Wu, Monika Balvociute, Vincent Moulton
SPECTRE: a suite of phylogenetic tools for reticulate evolution. Bioinform. 34 (6) (2018)
Leo van Iersel, Vincent Moulton
Leaf-Reconstructibility of Phylogenetic Networks. SIAM J. Discret. Math. 32 (3) (2018)
Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. CoRR (2018)
Matthew B. Stocks, Irina Mohorianu, Matthew Beckers, Claudia Paicu, Simon Moxon, Joshua Thody, Tamas Dalmay, Vincent Moulton
The UEA sRNA Workbench (version 4.4): a comprehensive suite of tools for analyzing miRNAs and sRNAs. Bioinform. 34 (19) (2018)
Vincent Moulton, Andreas Spillner, Taoyang Wu
UPGMA and the normalized equidistant minimum evolution problem. Theor. Comput. Sci. 721 (2018)
Katharina T. Huber, Vincent Moulton, Marie-France Sagot, Blerina Sinaimeri
Geometric medians in reconciliation spaces of phylogenetic trees. Inf. Process. Lett. 136 (2018)
Vincent Moulton, Andreas Spillner, Taoyang Wu
UPGMA and the normalized equidistant minimum evolution problem. CoRR (2017)
Leo van Iersel, Vincent Moulton, Eveline de Swart, Taoyang Wu
Binets: fundamental building blocks for phylogenetic networks. CoRR (2017)
Andrew Francis, Katharina T. Huber, Vincent Moulton
Tree-based unrooted phylogenetic networks. CoRR (2017)
Magnus Bordewich, Katharina T. Huber, Vincent Moulton, Charles Semple
Recovering tree-child networks from shortest inter-taxa distance information. CoRR (2017)
Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
From event labeled gene trees to species trees. CoRR (2017)
Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
Reconstructing Phylogenetic Level-1 Networks from Nondense Binet and Trinet Sets. Algorithmica 77 (1) (2017)
Vincent Moulton, James Oldman, Taoyang Wu
A cubic-time algorithm for computing the trinet distance between level-1 networks. CoRR (2017)
Vincent Moulton, James Oldman, Taoyang Wu
A cubic-time algorithm for computing the trinet distance between level-1 networks. Inf. Process. Lett. 123 (2017)
Claudia Paicu, Irina Mohorianu, Matthew B. Stocks, Ping Xu, Aurore Coince, Martina Billmeier, Tamas Dalmay, Vincent Moulton, Simon Moxon
miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets. Bioinform. 33 (16) (2017)
Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
Quarnet inference rules for level-1 networks. CoRR (2017)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
Characterizing block graphs in terms of their vertex-induced partitions. Australas. J Comb. 66 (2016)
Steven Kelk, Mareike Fischer, Vincent Moulton, Taoyang Wu
Reduction rules for the maximum parsimony distance on phylogenetic trees. Theor. Comput. Sci. 646 (2016)
Sarah Bastkowski, Vincent Moulton, Andreas Spillner, Taoyang Wu
The minimum evolution problem is hard: a link between tree inference and graph clustering problems. Bioinform. 32 (4) (2016)
Steven Kelk, Mareike Fischer, Vincent Moulton, Taoyang Wu
Reduction rules for the maximum parsimony distance on phylogenetic trees. CoRR (2015)
Vincent Moulton, Taoyang Wu
A parsimony-based metric for phylogenetic trees. Adv. Appl. Math. 66 (2015)
Sven Herrmann, Jack H. Koolen, Alice Lesser, Vincent Moulton, Taoyang Wu
Optimal realizations of two-dimensional, totally-decomposable metrics. Discret. Math. 338 (8) (2015)
Sven Herrmann, Vincent Moulton
Computing the blocks of a quasi-median graph. Discret. Appl. Math. 179 (2014)
Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
Representing Partitions on Trees. SIAM J. Discret. Math. 28 (3) (2014)
Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets. CoRR (2014)
Sarah Bastkowski, Andreas Spillner, Vincent Moulton
Fishing for minimum evolution trees with Neighbor-Nets. Inf. Process. Lett. 114 (1-2) (2014)
Éva Czabarka, Péter L. Erdös, Virginia Johnson, Vincent Moulton
Generating functions for multi-labeled trees. Discret. Appl. Math. 161 (1-2) (2013)
Sven Herrmann, Vincent Moulton, Andreas Spillner
Searching for realizations of finite metric spaces in tight spans. Discret. Optim. 10 (4) (2013)
Katharina T. Huber, Vincent Moulton
Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets. Algorithmica 66 (3) (2013)
Andreas W. M. Dress, Vincent Moulton, Andreas Spillner, Taoyang Wu
Obtaining splits from cut sets of tight spans. Discret. Appl. Math. 161 (10-11) (2013)
Stefan Grünewald, Andreas Spillner, Sarah Bastkowski, Anja Bögershausen, Vincent Moulton
SuperQ: Computing Supernetworks from Quartets. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (1) (2013)
Jack H. Koolen, Alice Lesser, Vincent Moulton, Taoyang Wu
Injective optimal realizations of finite metric spaces. Discret. Math. 312 (10) (2012)
Sven Herrmann, Vincent Moulton
Computing the blocks of a quasi-median graph CoRR (2012)
Sven Herrmann, Vincent Moulton
-dissimilarity map. Adv. Appl. Math. 49 (1) (2012)
Iain Martyn, Tyler S. Kuhn, Arne O. Mooers, Vincent Moulton, Andreas Spillner
Computing evolutionary distinctiveness indices in large scale analysis. Algorithms Mol. Biol. 7 (2012)
Matthew B. Stocks, Simon Moxon, Daniel Mapleson, Hugh C. Woolfenden, Irina Mohorianu, Leighton Folkes, Frank Schwach, Tamas Dalmay, Vincent Moulton
The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets. Bioinform. 28 (15) (2012)
Irina Mohorianu, Sara Lopez-Gomollon, Frank Schwach, Tamas Dalmay, Vincent Moulton
FiRePat - Finding Regulatory Patterns between sRNAs and Genes. WIREs Data Mining Knowl. Discov. 2 (3) (2012)
Sven Herrmann, Katharina T. Huber, Vincent Moulton, Andreas Spillner
Recognizing Treelike k-Dissimilarities. J. Classif. 29 (3) (2012)
Katharina T. Huber, Vincent Moulton, Andreas Spillner, Sabine Storandt, Radoslaw Suchecki
Computing a Consensus of Multilabeled Trees. ALENEX (2012)
Andreas Spillner, Binh T. Nguyen, Vincent Moulton
Constructing and Drawing Regular Planar Split Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (2) (2012)
Sven Herrmann, Vincent Moulton
Trees, tight-spans and point configurations. Discret. Math. 312 (16) (2012)
Jan T. Kim, Anyela Camargo, Alessandra Devoto, Vincent Moulton, John Turner
. Artif. Life 18 (4) (2012)
Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
From event-labeled gene trees to species trees. BMC Bioinform. 13 (S-19) (2012)
Marc Thuillard, Vincent Moulton
Identifying and Reconstructing Lateral Transfers from Distance Matrices by Combining the Minimum Contradiction Method and Neighbor-Net. J. Bioinform. Comput. Biol. 9 (4) (2011)
Katharina T. Huber, Vincent Moulton
Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets CoRR (2011)
Vincent Moulton, Mike A. Steel
The 'Butterfly effect' in Cayley graphs, and its relevance for evolutionary genomics CoRR (2011)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Blocks and Cut Vertices of the Buneman Graph. SIAM J. Discret. Math. 25 (4) (2011)
Katharina T. Huber, Andreas Spillner, Radoslaw Suchecki, Vincent Moulton
Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (4) (2011)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
An Algorithm for Computing Cutpoints in Finite Metric Spaces. J. Classif. 27 (2) (2010)
Binh T. Nguyen, Andreas Spillner, Brent C. Emerson, Vincent Moulton
Distinguishing between hot-spots and melting-pots of genetic diversity using haplotype connectivity. Algorithms Mol. Biol. 5 (2010)
Darren P. Martin, Philippe Lemey, Martin Lott, Vincent Moulton, David Posada, Pierre Lefeuvre
RDP3: a flexible and fast computer program for analyzing recombination. Bioinform. 26 (19) (2010)
Daniel MacLean, Vincent Moulton, David J. Studholme
Finding sRNA generative locales from high-throughput sequencing data with NiBLS. BMC Bioinform. 11 (2010)
Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton
Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Stefan Grünewald, Vincent Moulton, Andreas Spillner
Consistency of the QNet algorithm for generating planar split networks from weighted quartets. Discret. Appl. Math. 157 (10) (2009)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
An algorithm for computing cutpoints in finite metric spaces CoRR (2009)
Stefan Grünewald, Vincent Moulton
Maximum Parsimony for Tree Mixtures. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Taoyang Wu, Vincent Moulton, Mike A. Steel
Refining Phylogenetic Trees Given Additional Data: An Algorithm Based on Parsimony. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Vincent Moulton, Andreas Spillner
Phylogenetic diversity and the maximum coverage problem. Appl. Math. Lett. 22 (10) (2009)
Martin Lott, Andreas Spillner, Katharina T. Huber, Vincent Moulton
PADRE: a package for analyzing and displaying reticulate evolution. Bioinform. 25 (9) (2009)
Daniel H. Huson, Vincent Moulton, Mike A. Steel
Special Section: Phylogenetics. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Charles Semple, Andreas Spillner
Characterizing weak compatibility in terms of weighted quartets. Adv. Appl. Math. 42 (3) (2009)
Philippe Lemey, Martin Lott, Darren P. Martin, Vincent Moulton
Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning. BMC Bioinform. 10 (2009)
Andreas W. M. Dress, Vincent Moulton, Andreas Spillner, Taoyang Wu
Barriers in metric spaces. Appl. Math. Lett. 22 (8) (2009)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
A graph-theoretical invariant of topological spaces. Appl. Math. Lett. 22 (2) (2009)
Jack H. Koolen, Alice Lesser, Vincent Moulton
Optimal realizations of generic five-point metrics. Eur. J. Comb. 30 (5) (2009)
Stefan Grünewald, Andreas Spillner, Kristoffer Forslund, Vincent Moulton
Constructing Phylogenetic Supernetworks from Quartets. WABI (2008)
Andreas Spillner, Binh T. Nguyen, Vincent Moulton
Computing Phylogenetic Diversity for Split Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (2) (2008)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Compatible decompositions and block realizations of finite metrics. Eur. J. Comb. 29 (7) (2008)
Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
Characterizing Cell-Decomposable Metrics. Electron. J. Comb. 15 (1) (2008)

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Publication Activity (10 Years)

Top Topics

Top Venues

Vincent Moulton