Katharina T. Huber

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 33

Top Topics

Inference Rules

Horizontal Gene Transfer

Top Venues

Adv. Appl. Math.

Discret. Appl. Math.

SIAM J. Discret. Math.

Publications

Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
Orienting undirected phylogenetic networks. J. Comput. Syst. Sci. 140 (2024)
David Bryant, Katharina T. Huber, Vincent Moulton, Paul F. Tupper
Diversities and the Generalized Circumradius. Discret. Comput. Geom. 70 (4) (2023)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Shared ancestry graphs and symbolic arboreal maps. CoRR (2023)
Marc Hellmuth, Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz, Peter F. Stadler
Injective Split Systems. Graphs Comb. 39 (4) (2023)
Andrew R. Francis, Katharina T. Huber, Vincent Moulton, Taoyang Wu
-cactuses. Adv. Appl. Math. 142 (2023)
Katharina T. Huber, Vincent Moulton, Andreas Spillner
Computing consensus networks for collections of 1-nested phylogenetic networks. J. Graph Algorithms Appl. 27 (7) (2023)
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami
Level-2 networks from shortest and longest distances. Discret. Appl. Math. 306 (2022)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Overlaid species forests. Discret. Appl. Math. 309 (2022)
Henning Fernau, Katharina T. Huber, Joseph (Seffi) Naor
Invited Talks. CIAC (2021)
Katharina T. Huber, Vincent Moulton, Andreas Spillner
Optimal realizations and the block decomposition of a finite metric space. Discret. Appl. Math. 302 (2021)
Katharina T. Huber
Phylogenetic Networks, A Way to Cope with Complex Evolutionary Processes. CIAC (2021)
Katharina T. Huber, Simone Linz, Vincent Moulton
Weakly displaying trees in temporal tree-child network. CoRR (2020)
Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
Evolution through segmental duplications and losses: a Super-Reconciliation approach. Algorithms Mol. Biol. 15 (1) (2020)
Katharina T. Huber, Guillaume E. Scholz
Phylogenetic networks that are their own fold-ups. Adv. Appl. Math. 113 (2020)
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
Recognizing and realizing cactus metrics. Inf. Process. Lett. 157 (2020)
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
Rooting for phylogenetic networks. CoRR (2019)
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
Recognizing and realizing cactus metrics. CoRR (2019)
Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
Three-Way Symbolic Tree-Maps and Ultrametrics. J. Classif. 36 (3) (2019)
Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. Theor. Comput. Sci. 760 (2019)
Katharina T. Huber, Vincent Moulton, Taoyang Wu
Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks. J. Classif. 36 (2) (2019)
Katharina T. Huber, Jack H. Koolen, Vincent Moulton
The polytopal structure of the tight-span of a totally split-decomposable metric. Discret. Math. 342 (3) (2019)
Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
Reconstructing the History of Syntenies Through Super-Reconciliation. RECOMB-CG (2018)
Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Mike A. Steel
Combinatorial properties of triplet covers for binary trees. Adv. Appl. Math. 99 (2018)
Katharina T. Huber, Guillaume E. Scholz
Beyond Representing Orthology Relations by Trees. Algorithmica 80 (1) (2018)
Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. CoRR (2018)
Katharina T. Huber, Vincent Moulton, Marie-France Sagot, Blerina Sinaimeri
Geometric medians in reconciliation spaces of phylogenetic trees. Inf. Process. Lett. 136 (2018)
Andrew Francis, Katharina T. Huber, Vincent Moulton
Tree-based unrooted phylogenetic networks. CoRR (2017)
Magnus Bordewich, Katharina T. Huber, Vincent Moulton, Charles Semple
Recovering tree-child networks from shortest inter-taxa distance information. CoRR (2017)
Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
From event labeled gene trees to species trees. CoRR (2017)
Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
Reconstructing Phylogenetic Level-1 Networks from Nondense Binet and Trinet Sets. Algorithmica 77 (1) (2017)
Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
Quarnet inference rules for level-1 networks. CoRR (2017)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
Characterizing block graphs in terms of their vertex-induced partitions. Australas. J Comb. 66 (2016)
Katharina T. Huber, Guillaume E. Scholz
Beyond representing orthology relations by trees. CoRR (2016)
Andrei-Alin Popescu, Katharina T. Huber
PSIKO2: a fast and versatile tool to infer population stratification on various levels in GWAS. Bioinform. 31 (21) (2015)
Katharina T. Huber, George Kettleborough
Distinguished Minimal Topological Lassos. SIAM J. Discret. Math. 29 (2) (2015)
Andreas W. M. Dress, Katharina T. Huber, Mike A. Steel
A matroid associated with a phylogenetic tree. Discret. Math. Theor. Comput. Sci. 16 (2) (2014)
Katharina T. Huber, Mike A. Steel
Tree Reconstruction from Triplet Cover Distances. Electron. J. Comb. 21 (2) (2014)
Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
Representing Partitions on Trees. SIAM J. Discret. Math. 28 (3) (2014)
Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets. CoRR (2014)
Katharina T. Huber, Vincent Moulton
Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets. Algorithmica 66 (3) (2013)
Andrei-Alin Popescu, Katharina T. Huber, Emmanuel Paradis
ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R. Bioinform. 28 (11) (2012)
Sven Herrmann, Katharina T. Huber, Vincent Moulton, Andreas Spillner
Recognizing Treelike k-Dissimilarities. J. Classif. 29 (3) (2012)
Katharina T. Huber, Vincent Moulton, Andreas Spillner, Sabine Storandt, Radoslaw Suchecki
Computing a Consensus of Multilabeled Trees. ALENEX (2012)
Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
From event-labeled gene trees to species trees. BMC Bioinform. 13 (S-19) (2012)
Katharina T. Huber, Leo van Iersel, Steven Kelk, Radoslaw Suchecki
A Practical Algorithm for Reconstructing Level-1 Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (3) (2011)
Katharina T. Huber, Vincent Moulton
Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets CoRR (2011)
Andreas W. M. Dress, Katharina T. Huber, Michael Anthony Steel
'Lassoing' a phylogenetic tree I: Basic properties, shellings, and covers CoRR (2011)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Blocks and Cut Vertices of the Buneman Graph. SIAM J. Discret. Math. 25 (4) (2011)
Katharina T. Huber, Andreas Spillner, Radoslaw Suchecki, Vincent Moulton
Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (4) (2011)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
An Algorithm for Computing Cutpoints in Finite Metric Spaces. J. Classif. 27 (2) (2010)
Jaroslaw Byrka, Pawel Gawrychowski, Katharina T. Huber, Steven Kelk
Worst-case optimal approximation algorithms for maximizing triplet consistency within phylogenetic networks. J. Discrete Algorithms 8 (1) (2010)
Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton
Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
An algorithm for computing cutpoints in finite metric spaces CoRR (2009)
Martin Lott, Andreas Spillner, Katharina T. Huber, Vincent Moulton
PADRE: a package for analyzing and displaying reticulate evolution. Bioinform. 25 (9) (2009)
Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Charles Semple, Andreas Spillner
Characterizing weak compatibility in terms of weighted quartets. Adv. Appl. Math. 42 (3) (2009)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
A graph-theoretical invariant of topological spaces. Appl. Math. Lett. 22 (2) (2009)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Compatible decompositions and block realizations of finite metrics. Eur. J. Comb. 29 (7) (2008)
Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
Characterizing Cell-Decomposable Metrics. Electron. J. Comb. 15 (1) (2008)
Y. B. Choe, Katharina T. Huber, Jacobus H. Koolen, Y. S. Kwon, Vincent Moulton
Counting vertices and cubes in median graphs of circular split systems. Eur. J. Comb. 29 (2) (2008)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Block realizations of finite metrics and the tight-span construction I: The embedding theorem. Appl. Math. Lett. 21 (12) (2008)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Cut points in metric spaces. Appl. Math. Lett. 21 (6) (2008)
Katharina T. Huber, Martin Lott, Vincent Moulton, Andreas Spillner
The Complexity of Deriving Multi-Labeled Trees from Bipartitions. J. Comput. Biol. 15 (6) (2008)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
An Algorithm for Computing Virtual Cut Points in Finite Metric Spaces. COCOA (2007)
Barbara R. Holland, Glenn Conner, Katharina T. Huber, Vincent Moulton
Imputing Supertrees and Supernetworks from Quartets. WABI (2006)
Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
On the structure of the tight-span of a totally split-decomposable metric. Eur. J. Comb. 27 (3) (2006)
Magnus Bordewich, Katharina T. Huber, Charles Semple
Identifying phylogenetic trees. Discret. Math. 300 (1-3) (2005)
Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
The tight span of an antipodal metric space - Part I: : Combinatorial properties. Discret. Math. 303 (1-3) (2005)
Katharina T. Huber, Vincent Moulton, Charles Semple, Mike A. Steel
Recovering a phylogenetic tree using pairwise closure operations. Appl. Math. Lett. 18 (3) (2005)
Andreas W. M. Dress, Barbara R. Holland, Katharina T. Huber, Jack H. Koolen, Vincent Moulton, Jan Weyer-Menkhoff
Delta additive and Delta ultra-additive maps, Gromov's trees, and the Farris transform. Discret. Appl. Math. 146 (1) (2005)
Katharina T. Huber, Vincent Moulton, Michael Anthony Steel
Four Characters Suffice to Convexly Define a Phylogenetic Tree. SIAM J. Discret. Math. 18 (4) (2005)
Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
The Tight Span of an Antipodal Metric Space: Part II--Geometrical Properties. Discret. Comput. Geom. 31 (4) (2004)
Katharina T. Huber, Vincent Moulton, Charles Semple
Replacing cliques by stars in quasi-median graphs. Discret. Appl. Math. 143 (1-3) (2004)
Katharina T. Huber
Recovering trees from well-separated multi-state characters. Discret. Math. 278 (1-3) (2004)
Dietmar Cieslik, Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
Connectivity calculus. Appl. Math. Lett. 16 (3) (2003)
Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
Antipodal Metrics and Split Systems. Eur. J. Comb. 23 (2) (2002)
Katharina T. Huber, Vincent Moulton
The relation graph. Discret. Math. 244 (1-3) (2002)
Hans-Jürgen Bandelt, Katharina T. Huber, Vincent Moulton
Quasi-median graphs from sets of partitions. Discret. Appl. Math. 122 (1-3) (2002)
Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
Six Points Suffice: How to Check for Metric Consistency. Eur. J. Comb. 22 (4) (2001)
Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
Affine Maps That Induce Polyhedral Complex Isomorphisms. Discret. Comput. Geom. 24 (1) (2000)
Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
Some new perspectives regarding sparse continuous models for discrete data structures. Electron. Notes Discret. Math. 2 (1999)