A Practical Algorithm for Reconstructing Level-1 Phylogenetic Networks.
Katharina T. HuberLeo van IerselSteven KelkRadoslaw SucheckiPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2011)
Keyphrases
- computational complexity
- search space
- input data
- detection algorithm
- dynamic programming
- theoretical analysis
- high accuracy
- recognition algorithm
- np hard
- experimental evaluation
- computational cost
- worst case
- search algorithm
- optimal solution
- improved algorithm
- tree structure
- data sets
- computationally demanding
- expectation maximization
- simulated annealing
- cost function
- graph cuts
- particle swarm optimization
- segmentation algorithm
- ant colony optimization
- probabilistic model
- matching algorithm
- selection algorithm
- significant improvement
- preprocessing