Sorin Draghici

ORCID

Publication Activity (10 Years)

Years Active: 1996-2021
Publications (10 Years): 18

Top Venues

University of St Andrews, UK (PHD)

Education History

University of St Andrews, UK

PHD

Publications

Hung Nguyen, Duc Tran, Jonathan M. Galazka, Sylvain V. Costes, Afshin Beheshti, Juli Petereit, Sorin Draghici, Tin Nguyen
CPA: a web-based platform for consensus pathway analysis and interactive visualization. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Sorin Draghici, Tuan-Minh Nguyen, Larry A. Sonna, Cordelia Ziraldo, Radu Vanciu, Raef Fadel, Austin Morrison, Rachel M. Kenney, George Alangaden, Mayur Ramesh, Gil Mor
COVID-19: disease pathways and gene expression changes predict methylprednisolone can improve outcome in severe cases. Bioinform. 37 (17) (2021)
Suzan Arslanturk, Sorin Draghici, Tin Nguyen
Integrated Cancer Subtyping using Heterogeneous Genome-Scale Molecular Datasets. PSB (2020)
Adib Shafi, Tin Nguyen, Azam Peyvandi-Pour, Sorin Draghici
GSMA: an approach to identify robust global and test Gene Signatures using Meta-Analysis. Bioinform. 36 (2) (2020)
Hung Nguyen, Sangam Shrestha, Sorin Draghici, Tin Nguyen
PINSPlus: a tool for tumor subtype discovery in integrated genomic data. Bioinform. 35 (16) (2019)
Nafiseh Saberian, Azam Peyvandi-Pour, Michele Donato, Sahar Ansari, Sorin Draghici
A new computational drug repurposing method using established disease-drug pair knowledge. Bioinform. 35 (19) (2019)
Azam Peyvandi-Pour, Nafiseh Saberian, Adib Shafi, Michele Donato, Sorin Draghici
A novel computational approach for drug repurposing using systems biology. Bioinform. 34 (16) (2018)
Adib Shafi, Cristina Mitrea, Tin Chi Nguyen, Sorin Draghici
A survey of the approaches for identifying differential methylation using bisulfite sequencing data. Briefings Bioinform. 19 (5) (2018)
Cristina Mitrea, Priyanga Wijesinghe, Gregory Dyson, Adéle Kruger, Douglas M. Ruden, Sorin Draghici, Aliccia Bollig-Fischer
Integrating 5hmC and gene expression data to infer regulatory mechanisms. Bioinform. 34 (9) (2018)
Suzan Arslanturk, Sorin Draghici
Disease Subtyping using Somatic Variant Data. BCB (2018)
Sahar Ansari, Calin Voichita, Michele Donato, Rebecca Tagett, Sorin Draghici
A Novel Pathway Analysis Approach Based on the Unexplained Disregulation of Genes. Proc. IEEE 105 (3) (2017)
Diana Diaz, Michele Donato, Tin Nguyen, Sorin Draghici
MicroRNA-Augmented Pathways (mirAP) and Their Applications to Pathway Analysis and Disease Subtyping. PSB (2017)
Tin Chi Nguyen, Cristina Mitrea, Rebecca Tagett, Sorin Draghici
DANUBE: Data-Driven Meta-ANalysis Using UnBiased Empirical Distributions - Applied to Biological Pathway Analysis. Proc. IEEE 105 (3) (2017)
Sahar Ansari, Michele Donato, Nafiseh Saberian, Sorin Draghici
An approach to infer putative disease-specific mechanisms using neighboring gene networks. Bioinform. 33 (13) (2017)
Tin Chi Nguyen, Rebecca Tagett, Michele Donato, Cristina Mitrea, Sorin Draghici
A novel bi-level meta-analysis approach: applied to biological pathway analysis. Bioinform. 32 (3) (2016)
Tin Chi Nguyen, Diana Diaz, Sorin Draghici
TOMAS: A novel TOpology-aware Meta-Analysis approach applied to System biology. BCB (2016)
Diana Diaz, Tin Chi Nguyen, Sorin Draghici
A Systems Biology Approach for Unsupervised Clustering of High-Dimensional Data. MOD (2016)
Adib Shafi, Michele Donato, Sorin Draghici
A systems biology approach for the identification of significantly perturbed genes. BCB (2015)
Jim Cavalcoli, Lonnie R. Welch, Bruce J. Aronow, Sorin Draghici, Daisuke Kihara
The International Society of Computational Biology presents: the Great Lakes Bioinformatics Conference, May 16-18, 2014, Cincinnati, Ohio. Bioinform. 30 (1) (2014)
Aliccia Bollig-Fischer, Luca Marchetti, Cristina Mitrea, Jiusheng Wu, Adéle Kruger, Vincenzo Manca, Sorin Draghici
Modeling time-dependent transcription effects of HER2 oncogene and discovery of a role for E2F2 in breast cancer cell-matrix adhesion. Bioinform. 30 (21) (2014)
Zeinab Taghavi, Narjes S. Movahedi, Sorin Draghici, Hamidreza Chitsaz
Distilled Single Cell Genome Sequencing and De Novo Assembly for Sparse Microbial Communities CoRR (2013)
Zeinab Taghavi, Narjes S. Movahedi, Sorin Draghici, Hamidreza Chitsaz
assembly for sparse microbial communities. Bioinform. 29 (19) (2013)
Calin Voichita, Michele Donato, Sorin Draghici
A genetic algorithms framework for estimating individual gene contributions in signaling pathways. IEEE Congress on Evolutionary Computation (2013)
Zhonghui Xu, Calin Voichita, Sorin Draghici, Roberto Romero
Z-Bag: a Classification Ensemble System with posterior Probabilistic outputs. Comput. Intell. 29 (2) (2013)
Maria Rosaria Del Sorbo, Walter Balzano, Michele Donato, Sorin Draghici
Assessing co-regulation of directly linked genes in biological networks using microarray time series analysis. Biosyst. 114 (2) (2013)
Michele Donato, Sorin Draghici, Alin Tomoiaga, Peter Westfall, Zhonghui Xu, Roberto Romero
A method for analysis and correction of cross-talk effects in pathway analysis. IJCNN (2012)
Calin Voichita, Michele Donato, Sorin Draghici
Incorporating Gene Significance in the Impact Analysis of Signaling Pathways. ICMLA (1) (2012)
Adi L. Tarca, Sorin Draghici, Gaurav Bhatti, Roberto Romero
Down-weighting overlapping genes improves gene set analysis. BMC Bioinform. 13 (2012)
Zeinab Tagliavi, Sorin Draghici
MDAsim: A multiple displacement amplification simulator. BIBM (2012)
Nadeem Ansari, Riyue Bao, Calin Voichita, Sorin Draghici
Detecting Phenotype-Specific Interactions between Biological Processes from Microarray Data and Annotations. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (5) (2012)
Luca Beltrame, Enrica Calura, Razvan R. Popovici, Lisa Rizzetto, Damariz Rivero Guedez, Michele Donato, Chiara Romualdi, Sorin Draghici, Duccio Cavalieri
The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways. Bioinform. 27 (15) (2011)
Bogdan Done, Purvesh Khatri, Arina Done, Sorin Draghici
Predicting Novel Human Gene Ontology Annotations Using Semantic Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (1) (2010)
Michele Donato, Sorin Draghici
Signaling pathways coupling phenomena. IJCNN (2010)
Adi L. Tarca, Sorin Draghici, Purvesh Khatri, Sonia S. Hassan, Pooja Mittal, Jung-sun Kim, Chong Jai Kim, Juan Pedro Kusanovic, Roberto Romero
A novel signaling pathway impact analysis. Bioinform. 25 (1) (2009)
Calin Voichita, Purvesh Khatri, Sorin Draghici
Identifying uncertainty regions in Support Vector Machines using geometric margin and convex hulls. IJCNN (2008)
Sorin Draghici, Adi L. Tarca, Longfei Yu, Stephen Ethier, Roberto Romero
KUTE-BASE: storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours. Bioinform. 24 (5) (2008)
Bogdan Done, Purvesh Khatri, Arina Done, Sorin Draghici
Semantic Analysis of Genome Annotations using Weighting Schemes. CIBCB (2007)
Purvesh Khatri, Calin Voichita, Khalid Kattan, Nadeem Ansari, Avani Khatri, Constantin Georgescu, Adi L. Tarca, Sorin Draghici
Onto-Tools: new additions and improvements in 2006. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Adi L. Tarca, Vincent J. Carey, Xue-wen Chen, Roberto Romero, Sorin Draghici
Machine Learning and Its Applications to Biology. PLoS Comput. Biol. 3 (6) (2007)
Purvesh Khatri, Sorin Draghici, Adi L. Tarca, Sonia S. Hassan, Roberto Romero
A System Biology Approach for the Steady-State Analysis of Gene Signaling Networks. CIARP (2007)
Purvesh Khatri, Valmik Desai, Adi L. Tarca, Sivakumar Sellamuthu, Derek E. Wildman, Roberto Romero, Sorin Draghici
New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Sorin Draghici, Sivakumar Sellamuthu, Purvesh Khatri
Babel's tower revisited: a universal resource for cross-referencing across annotation databases. Bioinform. 22 (23) (2006)
Valmik Desai, Purvesh Khatri, Arina Done, Aviva Friedman, Michael A. Tainsky, Sorin Draghici
A Novel Bioinformatics Technique for Predicting Condition-specific Transcription Factor Binding Sites. CIBCB (2005)
Otto Muzik, Siamak Pourabdollah, Csaba Juhász, Diane C. Chugani, James Janisse, Sorin Draghici
Application of an objective method for localizing bilateral cortical FDG PET abnormalities to guide the resection of epileptic foci. IEEE Trans. Biomed. Eng. 52 (9) (2005)
Purvesh Khatri, Sivakumar Sellamuthu, Pooja Malhotra, Kashyap Amin, Arina Done, Sorin Draghici
Recent additions and improvements to the Onto-Tools. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Purvesh Khatri, Bogdan Done, Archana Rao, Arina Done, Sorin Draghici
A semantic analysis of the annotations of the human genome. Bioinform. 21 (16) (2005)
Purvesh Khatri, Sorin Draghici
Ontological analysis of gene expression data: current tools, limitations, and open problems. Bioinform. 21 (18) (2005)
Sorin Draghici, Purvesh Khatri, Yanhong Liu, Kitty J. Chase, Elizabeth A. Bode, David A. Kulesh, Leonard P. Wasieloski, David A. Norwood, Jaques Reifman
Identification of Genomic Signatures for the Design of Assays for the Detection and Monitoring of Anthrax Threats. Pacific Symposium on Biocomputing (2005)
Bin Yao, Sanjay N. Rakhade, Qunfang Li, Sharlin Ahmed, Raul Krauss, Sorin Draghici, Jeffrey A. Loeb
Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells. BMC Bioinform. 5 (2004)
Purvesh Khatri, Pratik Bhavsar, Gagandeep Bawa, Sorin Draghici
Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Michael Johnson, Farshad Fotouhi, Sorin Draghici, Ming Dong, Duo Xu
Discovering Document Semantics QBYS: A System for Querying the WWW by Semantics. Multim. Tools Appl. 24 (2) (2004)
Siamak Pourabdollah, Otto Muzik, Sorin Draghici
A Back Propagation Neural Network for Localizing Abnormal Cortical Regions in FDG PET Images in Epileptic Children. IWANN (2) (2003)
Sorin Draghici, R. Brian Potter
Predicting HIV drug resistance with neural networks. Bioinform. 19 (1) (2003)
Sorin Draghici, Purvesh Khatri, Pratik Bhavsar, Abhik Shah, Stephen A. Krawetz, Michael A. Tainsky
Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate. Nucleic Acids Res. 31 (13) (2003)
Sorin Draghici, Olga Kulaeva, Bruce Hoff, Anton Petrov, Soheil Shams, Michael A. Tainsky
Noise Sampling Method: An ANOVA Approach Allowing Robust Selection of Differentially Regulated Genes Measured by DNA Microarrays. Bioinform. 19 (11) (2003)
Sorin Draghici, Frank M. Graziano, Samira Y. Kettoola, Ishwar K. Sethi, George Towfic
Mining HIV Dynamics Using Independent Component Analysis. Bioinform. 19 (8) (2003)
Sorin Draghici, Korkut Uygun, Xiaoju Wang, Mita Chatterjee, Michael A. Tainsky
Cancer Prediction by Protein Microarray Profiling. Neural Networks and Computational Intelligence (2003)
David A. Sprecher, Sorin Draghici
Space-filling curves and Kolmogorov superposition-based neural networks. Neural Networks 15 (1) (2002)
R. Brian Potter, Sorin Draghici
A SOFM Approach to Predicting HIV Drug Resistance. Pacific Symposium on Biocomputing (2002)
Sorin Draghici
On the capabilities of neural networks using limited precision weights. Neural Networks 15 (3) (2002)
Sorin Draghici
The constraint based decomposition (CBD) training architecture. Neural Networks 14 (4-5) (2001)
Sorin Draghici
Neural Networks in Analog Hardware - Design and Implementation Issues. Int. J. Neural Syst. 10 (1) (2000)
Sorin Draghici, Lonnie T. Cumberland Jr., Ladislau C. Kovari
Correlation of HIV protease structure with Indinavir resistance: a data mining and neural networks approach. Data Mining and Knowledge Discovery: Theory, Tools, and Technology (2000)
Valeriu Beiu, Sorin Draghici, Thierry de Pauw
A Constructive Approach to Calculating Lower Entropy Bounds. Neural Process. Lett. 9 (1) (1999)
Sorin Draghici
Some new results on the capabilities of integer weights neural networks in classification problems. IJCNN (1999)
Sorin Draghici
On the Computational Power of Limited Precision Weights Neutral Networks in Classification Problems: How to Calculate the Weight Range so that a Solution Will Exist. IWANN (1) (1999)
Sorin Draghici, Damon A. Miller
A VLSI neural network classifier based on integer-valued weights. IJCNN (1999)
Sorin Draghici
On the Complexity of VLSI-Friendly Neural Networks for Classification Problems. Canadian Conference on AI (1998)
Sorin Draghici
A Neural Network Based Artificial Vision System for Licence Plate Recognition. Int. J. Neural Syst. 8 (1) (1997)
Valeriu Beiu, Sorin Draghici, Hanna E. Makaruk
On limited fan-in optimal neural networks. SBRN (1997)
Sorin Draghici, Ishwar K. Sethi
On the Possibilities of the Limited Precision Weights Neural Networks in Classification Problems. IWANN (1997)
Sorin Draghici
Some enhancements of the constraint based decomposition training architecture. ICNN (1996)

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Publication Activity (10 Years)

Top Topics

Top Venues

Sorin Draghici