Songbai Ji

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 18

Top Topics

Cortical Surface

Minimally Invasive

Top Venues

Medical Imaging: Image-Guided Procedures

Int. J. Comput. Assist. Radiol. Surg.

Medical Image Anal.

Publications

Chaokai Zhang, Lara M. Bartels, Adam Clansey, Julian Kloiber, Daniel Bondi, Paul van Donkelaar, Lyndia Wu, Alexander Rauscher, Songbai Ji
A computational pipeline towards large-scale and multiscale modeling of traumatic axonal injury. Comput. Biol. Medicine 171 (2024)
Xihan Ma, Xiao Zhang, Yang Wang, Christopher J. Nycz, Arno Sungarian, Songbai Ji, Haichong K. Zhang
. ISMR (2024)
Ryan B. Duke, Xiaoyao Fan, William R. Warner, Steven P. Baltic, Kristen Chen, Linton T. Evans, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Automated localization of mini-screw fiducials in spine CT scans. Medical Imaging: Image-Guided Procedures (2023)
William R. Warner, Xiaoyao Fan, Ryan B. Duke, Kristen L. Chen, Haley Stoner, Chen Li, Shaoju Wu, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Towards accounting for intraoperative spine motion: a simulation study of registration between stereovision surfaces. Medical Imaging: Image-Guided Procedures (2023)
Ryan B. Duke, Xiaoyao Fan, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Video data acquisition accuracy for hand-held stereovision in image-guided surgery. Medical Imaging: Image-Guided Procedures (2022)
William R. Warner, Xiaoyao Fan, Ryan B. Duke, Tahsin M. Khan, Songbai Ji, Steven P. Baltic, Sohail K. Mirza, Keith D. Paulsen
Preoperative-to-interoperative shift in spine pose measured as change in lordosis Cobb angle and its effect on navigational accuracy. Medical Imaging: Image-Guided Procedures (2022)
Songbai Ji, Wei Zhao
Displacement voxelization to resolve mesh-image mismatch: Application in deriving dense white matter fiber strains. Comput. Methods Programs Biomed. 213 (2022)
Xiaoyao Fan, Ryan B. Duke, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Stereovision surface stitching for image updating in open spine surgery. Medical Imaging: Image-Guided Procedures (2021)
Shaoju Wu, Yunliang Cai, Xiaoyao Fan, Sohail K. Mirza, Keith D. Paulsen, Songbai Ji
A vertebral level-wise data augmentation scheme for segmentation via deep learning. Medical Imaging: Image Processing (2021)
Yunliang Cai, Shaoju Wu, Xiaoyao Fan, Jonathan Olson, Linton T. Evans, S. Scott Lollis, Sohail K. Mirza, Keith D. Paulsen, Songbai Ji
A level-wise spine registration framework to account for large pose changes. Int. J. Comput. Assist. Radiol. Surg. 16 (6) (2021)
Ryan Duke, Xiaoyao Fan, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Semi-automated calibration of a hand-held stereovision system using a tracked calibration frame for image guided surgery. Medical Imaging: Image-Guided Procedures (2021)
Xiaoyao Fan, Maxwell S. Durtschi, Chen Li, Linton T. Evans, Songbai Ji, Yunliang Cai, Sohail K. Mirza, Keith D. Paulsen
Stereovision-updated image guidance in multi-level open spine surgery: short vs. long exposure. Medical Imaging: Image-Guided Procedures (2020)
Xiaoyao Fan, Maxwell S. Durtschi, Chen Li, Songbai Ji, Sohail K. Mirza, Keith D. Paulsen
Calibration of a hand-held stereovision system for image-guided spinal surgery. Medical Imaging: Image-Guided Procedures (2019)
William W. Lytton, Jeff Arle, Georgiy V. Bobashev, Songbai Ji, Tara L. Klassen, Vasilis Z. Marmarelis, James Schwaber, Mohamed A. Sherif, Terence D. Sanger
Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Informatics 4 (4) (2017)
Xiaoyao Fan, David W. Roberts, Jonathan D. Olson, Songbai Ji, Keith D. Paulsen
Automatic intraoperative fiducial-less patient registration using cortical surface. Medical Imaging: Image-Guided Procedures (2017)
Yunliang Cai, Jonathan D. Olson, Xiaoyao Fan, Linton T. Evans, Keith D. Paulsen, David W. Roberts, Sohail K. Mirza, S. Scott Lollis, Songbai Ji
Automatic geometric rectification for patient registration in image-guided spinal surgery. Medical Imaging: Image-Guided Procedures (2016)
Xiaoyao Fan, Songbai Ji, Jonathan D. Olson, David W. Roberts, Alex Hartov, Keith D. Paulsen
Image updating for brain deformation compensation in tumor resection. Medical Imaging: Image-Guided Procedures (2016)
Yunliang Cai, Songbai Ji
Combining Deep Learning Networks with Permutation Tests to Predict Traumatic Brain Injury Outcome. BrainLes@MICCAI (2016)
Songbai Ji, Xiaoyao Fan, Jonathan D. Olson, Linton T. Evans, Keith D. Paulsen, David W. Roberts, Sohail K. Mirza, S. Scott Lollis
Patient Registration via Topologically Encoded Depth Projection Images in Spine Surgery. CSI@MICCAI (2015)
Songbai Ji, Xiaoyao Fan, Keith D. Paulsen, David W. Roberts, Sohail K. Mirza, S. Scott Lollis
Patient Registration Using Intraoperative Stereovision in Image-guided Open Spinal Surgery. IEEE Trans. Biomed. Eng. 62 (9) (2015)
Xiaoyao Fan, Songbai Ji, David W. Roberts, Keith D. Paulsen
Localizing and tracking electrodes using stereovision in epilepsy cases. Medical Imaging: Image-Guided Procedures (2015)
Songbai Ji, Xiaoyao Fan, Keith D. Paulsen, David W. Roberts, Sohail K. Mirza, S. Scott Lollis
Intraoperative CT as a registration benchmark for intervertebral motion compensation in image-guided open spinal surgery. Int. J. Comput. Assist. Radiol. Surg. 10 (12) (2015)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Alex Hartov, Keith D. Paulsen
Cortical surface shift estimation using stereovision and optical flow motion tracking via projection image registration. Medical Image Anal. 18 (7) (2014)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Keith D. Paulsen
Efficient Stereo Image Geometrical Reconstruction at Arbitrary Camera Settings from a Single Calibration. MICCAI (1) (2014)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Keith D. Paulsen
Intraoperative measurement of indenter-induced brain deformation: a feasibility study. Medical Imaging: Image-Guided Procedures (2014)
Timothy J. Schaewe, Xiaoyao Fan, Songbai Ji, David W. Roberts, Keith D. Paulsen, David A. Simon
Integration of intraoperative stereovision imaging for brain shift visualization during image-guided cranial procedures. Medical Imaging: Image-Guided Procedures (2014)
Songbai Ji, Xiaoyao Fan, Alex Hartov, David W. Roberts, Keith D. Paulsen
Measuring soft tissue material properties using stereovision and indentation: a proof-of-concept study. Medical Imaging: Image-Guided Procedures (2013)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Alex Hartov, Keith D. Paulsen
Flow-Based Correspondence Matching in Stereovision. MLMI (2013)
Yasheng Chen, Zheng Fan, Songbai Ji, Joseph Muenzer, Hongyu An, Weili Lin
Patient-Specific Biomechanical Modeling of Ventricular Enlargement in Hydrocephalus from Longitudinal Magnetic Resonance Imaging. MICCAI (3) (2013)
Timothy J. Schaewe, Xiaoyao Fan, Songbai Ji, Alex Hartov, Leslie Hiemenz Holton, David W. Roberts, Keith D. Paulsen, David A. Simon
Integration of intraoperative and model-updated images into an industry-standard neuronavigation system: initial results. Medical Imaging: Image-Guided Procedures (2013)
Xiaoyao Fan, Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen
Retractor-induced brain shift compensation in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2013)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Keith D. Paulsen
Quantifying cortical surface harmonic deformation with stereovision during open cranial neurosurgery. Medical Imaging: Image-Guided Procedures (2012)
Xiaoyao Fan, Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen
Registering stereovision surface with preoperative magnetic resonance images for brain shift compensation. Medical Imaging: Image-Guided Procedures (2012)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Alex Hartov, Keith D. Paulsen
Optimizing nonrigid registration performance between volumetric true 3D ultrasound images in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2011)
Songbai Ji, Xiaoyao Fan, David W. Roberts, Keith D. Paulsen
Cortical Surface Strain Estimation Using Stereovision. MICCAI (1) (2011)
Xiaoyao Fan, Songbai Ji, Kathryn Fontaine, Alex Hartov, David W. Roberts, Keith D. Paulsen
Simulation of brain tumor resection in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2011)
Yasheng Chen, Songbai Ji, Xunlei Wu, Hongyu An, Hongtu Zhu, Dinggang Shen, Weili Lin
Simulation of Brain Mass Effect with an Arbitrary Lagrangian and Eulerian FEM. MICCAI (2) (2010)
Xiaoyao Fan, Songbai Ji, Pablo Valdes, David W. Roberts, Alex Hartov, Keith D. Paulsen
Graphical user interfaces for simulation of brain deformation in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2010)
Songbai Ji, Xiaoyao Fan, Kathryn Fontaine, Alex Hartov, David W. Roberts, Keith D. Paulsen
An integrated model-based neurosurgical guidance system. Medical Imaging: Image-Guided Procedures (2010)
Fenghong Liu, S. Scott Lollis, Songbai Ji, Keith D. Paulsen, Alexander Hartov, David W. Roberts
Model-Based Estimation of Ventricular Deformation in the Cat Brain. MICCAI (1) (2009)
Songbai Ji, David W. Roberts, Alex Hartov, Keith D. Paulsen
Combining Multiple True 3D Ultrasound Image Volumes through Re-registration and Rasterization. MICCAI (1) (2009)
Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen
Data assimilation using a gradient descent method for estimation of intraoperative brain deformation. Medical Image Anal. 13 (5) (2009)
Songbai Ji, David W. Roberts, Alex Hartov, Keith D. Paulsen
Brain-skull contact boundary conditions in an inverse computational deformation model. Medical Image Anal. 13 (4) (2009)
Songbai Ji, Fenghong Liu, Xiaoyao Fan, Alex Hartov, David W. Roberts, Keith D. Paulsen
Model-based brain shift compensation in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2009)
Pablo Valdes, Brent T. Harris, Frederic Leblond, Kathryn Fontaine, Songbai Ji, Brian W. Pogue, Alex Hartov, David W. Roberts, Keith D. Paulsen
Brain tumor resection guided by fluorescence imaging and MRI image guidance. Medical Imaging: Image-Guided Procedures (2009)
Songbai Ji, Alex Hartov, Kathryn Fontaine, Andrea Borsic, David W. Roberts, Keith D. Paulsen
Coregistered volumetric true 3D ultrasonography in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2008)
Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen
Mutual-information-corrected tumor displacement using intraoperative ultrasound for brain shift compensation in image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2008)
Songbai Ji, Fenghong Liu, David W. Roberts, Alex Hartov, Keith D. Paulsen
Brain-skull boundary conditions in a computational deformation model. Medical Imaging: Image-Guided Procedures (2007)