Robin B. Gasser

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 9

Top Topics

Protein Structural

Influenza Virus

Top Venues

Nucleic Acids Res.

Briefings Bioinform.

Publications

Fuyi Li, Xudong Guo, Yue Bi, Runchang Jia, Miranda E. Pitt, Shirui Pan, Shuqin Li, Robin B. Gasser, Lachlan J. M. Coin, Jiangning Song
Digerati - A multipath parallel hybrid deep learning framework for the identification of mycobacterial PE/PPE proteins. Comput. Biol. Medicine 163 (2023)
Yan Liu, Guo Wei, Chen Li, Long-Chen Shen, Robin B. Gasser, Jiangning Song, Dijun Chen, Dong-Jun Yu
TripletCell: a deep metric learning framework for accurate annotation of cell types at the single-cell level. Briefings Bioinform. 24 (3) (2023)
Tong Pan, Chen Li, Yue Bi, Zhikang Wang, Robin B. Gasser, Anthony W. Purcell, Tatsuya Akutsu, Geoffrey I. Webb, Seiya Imoto, Jiangning Song
PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships. Bioinform. 39 (3) (2023)
Fang Wang, Fan Yang, Longkai Huang, Wei Li, Jiangning Song, Robin B. Gasser, Ruedi Aebersold, Guohua Wang, Jianhua Yao
Deep domain adversarial neural network for the deconvolution of cell type mixtures in tissue proteome profiling. Nat. Mac. Intell. 5 (11) (2023)
Yanan Wang, Changyuan Hu, Terry Kwok, Christopher A. Bain, Xiangyang Xue, Robin B. Gasser, Geoffrey I. Webb, Alex Boussioutas, Xian Shen, Roger J. Daly, Jiangning Song
DEMoS: a deep learning-based ensemble approach for predicting the molecular subtypes of gastric adenocarcinomas from histopathological images. Bioinform. 38 (17) (2022)
Shahid Iqbal, Fang Ge, Fuyi Li, Tatsuya Akutsu, Yuanting Zheng, Robin B. Gasser, Dong-Jun Yu, Geoffrey I. Webb, Jiangning Song
PROST: AlphaFold2-aware Sequence-Based Predictor to Estimate Protein Stability Changes upon Missense Mutations. J. Chem. Inf. Model. 62 (17) (2022)
Zhen Chen, Xuhan Liu, Pei Zhao, Chen Li, Yanan Wang, Fuyi Li, Tatsuya Akutsu, Chris Bain, Robin B. Gasser, Junzhou Li, Zuoren Yang, Xin Gao, Lukasz A. Kurgan, Jiangning Song
an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets. Nucleic Acids Res. 50 (W1) (2022)
Sanathoi Gurumayum, Puzi Jiang, Xiaowen Hao, Tulio de Lima Campos, Neil D. Young, Pasi K. Korhonen, Robin B. Gasser, Peer Bork, Xing-Ming Zhao, Lijie He, Wei-Hua Chen
OGEE v3: Online GEne Essentiality database with increased coverage of organisms and human cell lines. Nucleic Acids Res. 49 (Database-Issue) (2021)
Andreas Hofmann, Sarah Preston, Megan Cross, H. M. P. Dilrukshi Herath, Anne Simon, Robin B. Gasser
DRfit: a Java tool for the analysis of discrete data from multi-well plate assays. BMC Bioinform. 20 (1) (2019)
Parisa Amani, Todd Sneyd, Sarah Preston, Neil D. Young, Lyndel Mason, Ulla-Maja Bailey, Jonathan B. Baell, David Camp, Robin B. Gasser, Alain Dominique Gorse, Paul Taylor, Andreas Hofmann
A practical Java tool for small-molecule compound appraisal. J. Cheminformatics 7 (2015)
Adhemar Zerlotini, Eric R. G. R. Aguiar, Fudong Yu, Huayong Xu, Yixue Li, Neil D. Young, Robin B. Gasser, Anna V. Protasio, Matthew Berriman, David S. Roos, Jessica C. Kissinger, Guilherme C. Oliveira
SchistoDB: an updated genome resource for the three key schistosomes of humans. Nucleic Acids Res. 41 (Database-Issue) (2013)
Ranjeeta Menon, Gagan Garg, Robin B. Gasser, Shoba Ranganathan
TranSeqAnnotator: large-scale analysis of transcriptomic data. BMC Bioinform. 13 (S-17) (2012)
Conan K. Wang, Ursula Broder, Saroja K. Weeratunga, Robin B. Gasser, Alex Loukas, Andreas Hofmann
SBAL: a practical tool to generate and edit structure-based amino acid sequence alignments. Bioinform. 28 (7) (2012)
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair J. Nisbet, Shoba Ranganathan
(Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches. BMC Bioinform. 9 (S-1) (2008)
Shivashankar H. Nagaraj, Nandan Deshpande, Robin B. Gasser, Shoba Ranganathan
ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Shivashankar H. Nagaraj, Robin B. Gasser, Shoba Ranganathan
A hitchhiker's guide to expressed sequence tag (EST) analysis. Briefings Bioinform. 8 (1) (2007)