PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships.
Tong PanChen LiYue BiZhikang WangRobin B. GasserAnthony W. PurcellTatsuya AkutsuGeoffrey I. WebbSeiya ImotoJiangning SongPublished in: Bioinform. (2023)
Keyphrases
- deep learning
- gene ontology
- gene products
- attention mechanism
- protein function
- protein protein interactions
- gene function
- protein interaction data
- protein interaction
- microarray
- gene expression
- unsupervised learning
- interaction networks
- visual attention
- machine learning
- information theoretic
- protein complexes
- semantic similarity
- saliency map
- high throughput
- network topology
- computational methods
- mental models
- protein sequences
- weakly supervised
- higher order
- supervised learning
- data analysis
- object recognition
- feature selection
- real time